data_1VJ9 # _model_server_result.job_id YiziBvjd7RzobAn6CEt5Gw _model_server_result.datetime_utc '2025-07-30 13:53:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1vj9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":403}' # _entry.id 1VJ9 # _exptl.entry_id 1VJ9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1VJ9 _cell.length_a 53.23 _cell.length_b 54.9 _cell.length_c 82.28 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1VJ9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 46 U CYS 42 1_555 A SG CYS 62 U CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf2 A SG CYS 54 U CYS 50 1_555 A SG CYS 125 U CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 A SG CYS 150 U CYS 136 1_555 A SG CYS 219 U CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf4 A SG CYS 182 U CYS 168 1_555 A SG CYS 198 U CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf5 A SG CYS 209 U CYS 191 1_555 A SG CYS 237 U CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 365 n n S O2 SO4 doub 366 n n S O3 SO4 sing 367 n n S O4 SO4 sing 368 n n # _atom_sites.entry_id 1VJ9 _atom_sites.fract_transf_matrix[1][1] 0.018786 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018215 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012154 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 U 1 401 401 SO4 SO4 . C 2 SO4 U 1 403 403 SO4 SO4 . D 3 5IN U 1 300 300 5IN 5IN . E 4 HOH U 1 404 1 HOH WAT . E 4 HOH U 2 405 2 HOH WAT . E 4 HOH U 3 406 3 HOH WAT . E 4 HOH U 4 407 4 HOH WAT . E 4 HOH U 5 408 5 HOH WAT . E 4 HOH U 6 409 6 HOH WAT . E 4 HOH U 7 410 7 HOH WAT . E 4 HOH U 8 411 8 HOH WAT . E 4 HOH U 9 412 9 HOH WAT . E 4 HOH U 10 413 10 HOH WAT . E 4 HOH U 11 414 11 HOH WAT . E 4 HOH U 12 415 12 HOH WAT . E 4 HOH U 13 416 13 HOH WAT . E 4 HOH U 14 417 14 HOH WAT . E 4 HOH U 15 418 15 HOH WAT . E 4 HOH U 16 419 16 HOH WAT . E 4 HOH U 17 420 17 HOH WAT . E 4 HOH U 18 421 18 HOH WAT . E 4 HOH U 19 422 19 HOH WAT . E 4 HOH U 20 423 20 HOH WAT . E 4 HOH U 21 424 21 HOH WAT . E 4 HOH U 22 425 22 HOH WAT . E 4 HOH U 23 426 23 HOH WAT . E 4 HOH U 24 427 24 HOH WAT . E 4 HOH U 25 428 25 HOH WAT . E 4 HOH U 26 429 26 HOH WAT . E 4 HOH U 27 430 27 HOH WAT . E 4 HOH U 28 431 28 HOH WAT . E 4 HOH U 29 432 29 HOH WAT . E 4 HOH U 30 433 30 HOH WAT . E 4 HOH U 31 434 31 HOH WAT . E 4 HOH U 32 435 32 HOH WAT . E 4 HOH U 33 436 33 HOH WAT . E 4 HOH U 34 437 34 HOH WAT . E 4 HOH U 35 438 35 HOH WAT . E 4 HOH U 36 439 36 HOH WAT . E 4 HOH U 37 440 37 HOH WAT . E 4 HOH U 38 441 38 HOH WAT . E 4 HOH U 39 442 39 HOH WAT . E 4 HOH U 40 443 40 HOH WAT . E 4 HOH U 41 444 45 HOH WAT . E 4 HOH U 42 445 46 HOH WAT . E 4 HOH U 43 446 47 HOH WAT . E 4 HOH U 44 447 48 HOH WAT . E 4 HOH U 45 448 50 HOH WAT . E 4 HOH U 46 449 52 HOH WAT . E 4 HOH U 47 450 53 HOH WAT . E 4 HOH U 48 451 54 HOH WAT . E 4 HOH U 49 452 55 HOH WAT . E 4 HOH U 50 453 57 HOH WAT . E 4 HOH U 51 454 62 HOH WAT . E 4 HOH U 52 455 63 HOH WAT . E 4 HOH U 53 456 65 HOH WAT . E 4 HOH U 54 457 66 HOH WAT . E 4 HOH U 55 458 67 HOH WAT . E 4 HOH U 56 459 70 HOH WAT . E 4 HOH U 57 460 72 HOH WAT . E 4 HOH U 58 461 73 HOH WAT . E 4 HOH U 59 462 75 HOH WAT . E 4 HOH U 60 463 76 HOH WAT . E 4 HOH U 61 464 78 HOH WAT . E 4 HOH U 62 465 79 HOH WAT . E 4 HOH U 63 466 80 HOH WAT . E 4 HOH U 64 467 81 HOH WAT . E 4 HOH U 65 468 87 HOH WAT . E 4 HOH U 66 469 89 HOH WAT . E 4 HOH U 67 470 90 HOH WAT . E 4 HOH U 68 471 93 HOH WAT . E 4 HOH U 69 472 94 HOH WAT . E 4 HOH U 70 473 97 HOH WAT . E 4 HOH U 71 474 101 HOH WAT . E 4 HOH U 72 475 102 HOH WAT . E 4 HOH U 73 476 103 HOH WAT . E 4 HOH U 74 477 104 HOH WAT . E 4 HOH U 75 478 105 HOH WAT . E 4 HOH U 76 479 108 HOH WAT . E 4 HOH U 77 480 109 HOH WAT . E 4 HOH U 78 481 110 HOH WAT . E 4 HOH U 79 482 115 HOH WAT . E 4 HOH U 80 483 117 HOH WAT . E 4 HOH U 81 484 119 HOH WAT . E 4 HOH U 82 485 120 HOH WAT . E 4 HOH U 83 486 125 HOH WAT . E 4 HOH U 84 487 126 HOH WAT . E 4 HOH U 85 488 127 HOH WAT . E 4 HOH U 86 489 128 HOH WAT . E 4 HOH U 87 490 129 HOH WAT . E 4 HOH U 88 491 154 HOH WAT . E 4 HOH U 89 492 159 HOH WAT . E 4 HOH U 90 493 160 HOH WAT . E 4 HOH U 91 494 167 HOH WAT . E 4 HOH U 92 495 168 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . C 2 24.739 9.443 27.995 1 50.6 ? S SO4 403 U 1 HETATM 2 O O1 SO4 . . . C 2 24.888 9.743 29.434 1 47.06 ? O1 SO4 403 U 1 HETATM 3 O O2 SO4 . . . C 2 23.309 9.272 27.666 1 54.47 ? O2 SO4 403 U 1 HETATM 4 O O3 SO4 . . . C 2 25.279 10.56 27.193 1 50.06 ? O3 SO4 403 U 1 HETATM 5 O O4 SO4 . . . C 2 25.465 8.2 27.679 1 46.94 ? O4 SO4 403 U 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 5 #