data_1VJA # _model_server_result.job_id vqctD9o7DQlhHRu3vmUOag _model_server_result.datetime_utc '2024-11-30 09:04:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1vja # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 1VJA # _exptl.entry_id 1VJA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1VJA _cell.length_a 53.065 _cell.length_b 55.004 _cell.length_c 81.924 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1VJA _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 46 U CYS 42 1_555 A SG CYS 62 U CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf2 A SG CYS 54 U CYS 50 1_555 A SG CYS 125 U CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf3 A SG CYS 150 U CYS 136 1_555 A SG CYS 219 U CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf4 A SG CYS 182 U CYS 168 1_555 A SG CYS 198 U CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf5 A SG CYS 209 U CYS 191 1_555 A SG CYS 237 U CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 351 n n S O2 SO4 doub 352 n n S O3 SO4 sing 353 n n S O4 SO4 sing 354 n n # _atom_sites.entry_id 1VJA _atom_sites.fract_transf_matrix[1][1] 0.018845 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01818 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012206 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 U 1 401 401 SO4 SO4 . C 2 SO4 U 1 403 403 SO4 SO4 . D 3 7IN U 1 300 300 7IN 7IN . E 4 HOH U 1 404 2 HOH HOH . E 4 HOH U 2 405 3 HOH HOH . E 4 HOH U 3 406 4 HOH HOH . E 4 HOH U 4 407 5 HOH HOH . E 4 HOH U 5 408 6 HOH HOH . E 4 HOH U 6 409 7 HOH HOH . E 4 HOH U 7 410 8 HOH HOH . E 4 HOH U 8 411 9 HOH HOH . E 4 HOH U 9 412 10 HOH HOH . E 4 HOH U 10 413 11 HOH HOH . E 4 HOH U 11 414 12 HOH HOH . E 4 HOH U 12 415 13 HOH HOH . E 4 HOH U 13 416 14 HOH HOH . E 4 HOH U 14 417 15 HOH HOH . E 4 HOH U 15 418 16 HOH HOH . E 4 HOH U 16 419 17 HOH HOH . E 4 HOH U 17 420 18 HOH HOH . E 4 HOH U 18 421 19 HOH HOH . E 4 HOH U 19 422 20 HOH HOH . E 4 HOH U 20 423 21 HOH HOH . E 4 HOH U 21 424 22 HOH HOH . E 4 HOH U 22 425 23 HOH HOH . E 4 HOH U 23 426 24 HOH HOH . E 4 HOH U 24 427 25 HOH HOH . E 4 HOH U 25 428 27 HOH HOH . E 4 HOH U 26 429 29 HOH HOH . E 4 HOH U 27 430 30 HOH HOH . E 4 HOH U 28 431 31 HOH HOH . E 4 HOH U 29 432 32 HOH HOH . E 4 HOH U 30 433 33 HOH HOH . E 4 HOH U 31 434 34 HOH HOH . E 4 HOH U 32 435 36 HOH HOH . E 4 HOH U 33 436 38 HOH HOH . E 4 HOH U 34 437 39 HOH HOH . E 4 HOH U 35 438 40 HOH HOH . E 4 HOH U 36 439 41 HOH HOH . E 4 HOH U 37 440 42 HOH HOH . E 4 HOH U 38 441 43 HOH HOH . E 4 HOH U 39 442 44 HOH HOH . E 4 HOH U 40 443 45 HOH HOH . E 4 HOH U 41 444 46 HOH HOH . E 4 HOH U 42 445 47 HOH HOH . E 4 HOH U 43 446 48 HOH HOH . E 4 HOH U 44 447 50 HOH HOH . E 4 HOH U 45 448 51 HOH HOH . E 4 HOH U 46 449 52 HOH HOH . E 4 HOH U 47 450 54 HOH HOH . E 4 HOH U 48 451 55 HOH HOH . E 4 HOH U 49 452 56 HOH HOH . E 4 HOH U 50 453 57 HOH HOH . E 4 HOH U 51 454 59 HOH HOH . E 4 HOH U 52 455 60 HOH HOH . E 4 HOH U 53 456 61 HOH HOH . E 4 HOH U 54 457 62 HOH HOH . E 4 HOH U 55 458 63 HOH HOH . E 4 HOH U 56 459 65 HOH HOH . E 4 HOH U 57 460 66 HOH HOH . E 4 HOH U 58 461 67 HOH HOH . E 4 HOH U 59 462 68 HOH HOH . E 4 HOH U 60 463 69 HOH HOH . E 4 HOH U 61 464 70 HOH HOH . E 4 HOH U 62 465 71 HOH HOH . E 4 HOH U 63 466 72 HOH HOH . E 4 HOH U 64 467 74 HOH HOH . E 4 HOH U 65 468 75 HOH HOH . E 4 HOH U 66 469 76 HOH HOH . E 4 HOH U 67 470 78 HOH HOH . E 4 HOH U 68 471 79 HOH HOH . E 4 HOH U 69 472 81 HOH HOH . E 4 HOH U 70 473 82 HOH HOH . E 4 HOH U 71 474 84 HOH HOH . E 4 HOH U 72 475 85 HOH HOH . E 4 HOH U 73 476 86 HOH HOH . E 4 HOH U 74 477 89 HOH HOH . E 4 HOH U 75 478 90 HOH HOH . E 4 HOH U 76 479 92 HOH HOH . E 4 HOH U 77 480 93 HOH HOH . E 4 HOH U 78 481 95 HOH HOH . E 4 HOH U 79 482 96 HOH HOH . E 4 HOH U 80 483 98 HOH HOH . E 4 HOH U 81 484 99 HOH HOH . E 4 HOH U 82 485 100 HOH HOH . E 4 HOH U 83 486 102 HOH HOH . E 4 HOH U 84 487 103 HOH HOH . E 4 HOH U 85 488 105 HOH HOH . E 4 HOH U 86 489 107 HOH HOH . E 4 HOH U 87 490 108 HOH HOH . E 4 HOH U 88 491 111 HOH HOH . E 4 HOH U 89 492 113 HOH HOH . E 4 HOH U 90 493 115 HOH HOH . E 4 HOH U 91 494 116 HOH HOH . E 4 HOH U 92 495 117 HOH HOH . E 4 HOH U 93 496 118 HOH HOH . E 4 HOH U 94 497 119 HOH HOH . E 4 HOH U 95 498 120 HOH HOH . E 4 HOH U 96 499 122 HOH HOH . E 4 HOH U 97 500 128 HOH HOH . E 4 HOH U 98 501 130 HOH HOH . E 4 HOH U 99 502 131 HOH HOH . E 4 HOH U 100 503 135 HOH HOH . E 4 HOH U 101 504 136 HOH HOH . E 4 HOH U 102 505 137 HOH HOH . E 4 HOH U 103 506 139 HOH HOH . E 4 HOH U 104 507 140 HOH HOH . E 4 HOH U 105 508 143 HOH HOH . E 4 HOH U 106 509 144 HOH HOH . E 4 HOH U 107 510 145 HOH HOH . E 4 HOH U 108 511 148 HOH HOH . E 4 HOH U 109 512 155 HOH HOH . E 4 HOH U 110 513 160 HOH HOH . E 4 HOH U 111 514 161 HOH HOH . E 4 HOH U 112 515 162 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . B 2 32.614 6.414 45.773 1 42.55 ? S SO4 401 U 1 HETATM 2 O O1 SO4 . . . B 2 33.421 7.569 46.207 1 43.65 ? O1 SO4 401 U 1 HETATM 3 O O2 SO4 . . . B 2 31.214 6.617 46.189 1 47.4 ? O2 SO4 401 U 1 HETATM 4 O O3 SO4 . . . B 2 32.682 6.289 44.306 1 41.99 ? O3 SO4 401 U 1 HETATM 5 O O4 SO4 . . . B 2 33.14 5.183 46.393 1 44.81 ? O4 SO4 401 U 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 226 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #