data_1VJE # _model_server_result.job_id ZGCvU_ER0gm-SfV1vAqekg _model_server_result.datetime_utc '2024-11-26 23:20:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1vje # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":167}' # _entry.id 1VJE # _exptl.entry_id 1VJE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.81 _cell.angle_gamma 90 _cell.entry_id 1VJE _cell.length_a 43.548 _cell.length_b 81.917 _cell.length_c 49.327 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1VJE _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 81 A GLY 81 1_555 A N CSD 82 A CSD 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? covale ? covale2 A C CSD 82 A CSD 82 1_555 A N ARG 83 A ARG 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale3 B C GLY 81 B GLY 81 1_555 B N CSD 82 B CSD 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? covale ? covale4 B C CSD 82 B CSD 82 1_555 B N ARG 83 B ARG 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? metalc ? metalc1 A NE2 HIS 57 A HIS 57 1_555 C ZN ZN . A ZN 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc2 A NE2 HIS 61 A HIS 61 1_555 C ZN ZN . A ZN 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? metalc ? metalc3 A SG CYS 125 A CYS 125 1_555 C ZN ZN . A ZN 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? metalc ? metalc4 C ZN ZN . A ZN 167 1_555 H O HOH . B HOH 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc5 G O HOH . A HOH 520 1_555 F ZN ZN . B ZN 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? metalc ? metalc6 B NE2 HIS 57 B HIS 57 1_555 F ZN ZN . B ZN 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc7 B NE2 HIS 61 B HIS 61 1_555 F ZN ZN . B ZN 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? metalc ? metalc8 B SG CYS 125 B CYS 125 1_555 F ZN ZN . B ZN 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1VJE _atom_sites.fract_transf_matrix[1][1] 0.022963 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005221 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012207 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02079 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 167 1 ZN ZN . D 3 MSE A 1 301 301 MSE MSE . E 3 MSE A 1 401 401 MSE MSE . F 2 ZN B 1 167 2 ZN ZN . G 4 HOH A 1 402 3 HOH HOH . G 4 HOH A 2 403 5 HOH HOH . G 4 HOH A 3 404 7 HOH HOH . G 4 HOH A 4 405 12 HOH HOH . G 4 HOH A 5 406 14 HOH HOH . G 4 HOH A 6 407 16 HOH HOH . G 4 HOH A 7 408 19 HOH HOH . G 4 HOH A 8 409 20 HOH HOH . G 4 HOH A 9 410 22 HOH HOH . G 4 HOH A 10 411 23 HOH HOH . G 4 HOH A 11 412 28 HOH HOH . G 4 HOH A 12 413 29 HOH HOH . G 4 HOH A 13 414 31 HOH HOH . G 4 HOH A 14 415 32 HOH HOH . G 4 HOH A 15 416 35 HOH HOH . G 4 HOH A 16 417 37 HOH HOH . G 4 HOH A 17 418 38 HOH HOH . G 4 HOH A 18 419 43 HOH HOH . G 4 HOH A 19 420 47 HOH HOH . G 4 HOH A 20 421 48 HOH HOH . G 4 HOH A 21 422 49 HOH HOH . G 4 HOH A 22 423 51 HOH HOH . G 4 HOH A 23 424 52 HOH HOH . G 4 HOH A 24 425 53 HOH HOH . G 4 HOH A 25 426 54 HOH HOH . G 4 HOH A 26 427 56 HOH HOH . G 4 HOH A 27 428 58 HOH HOH . G 4 HOH A 28 429 61 HOH HOH . G 4 HOH A 29 430 68 HOH HOH . G 4 HOH A 30 431 70 HOH HOH . G 4 HOH A 31 432 72 HOH HOH . G 4 HOH A 32 433 73 HOH HOH . G 4 HOH A 33 434 75 HOH HOH . G 4 HOH A 34 435 79 HOH HOH . G 4 HOH A 35 436 81 HOH HOH . G 4 HOH A 36 437 82 HOH HOH . G 4 HOH A 37 438 90 HOH HOH . G 4 HOH A 38 439 96 HOH HOH . G 4 HOH A 39 440 97 HOH HOH . G 4 HOH A 40 441 99 HOH HOH . G 4 HOH A 41 442 100 HOH HOH . G 4 HOH A 42 443 104 HOH HOH . G 4 HOH A 43 444 107 HOH HOH . G 4 HOH A 44 445 108 HOH HOH . G 4 HOH A 45 446 110 HOH HOH . G 4 HOH A 46 447 112 HOH HOH . G 4 HOH A 47 448 114 HOH HOH . G 4 HOH A 48 449 116 HOH HOH . G 4 HOH A 49 450 123 HOH HOH . G 4 HOH A 50 451 124 HOH HOH . G 4 HOH A 51 452 125 HOH HOH . G 4 HOH A 52 453 128 HOH HOH . G 4 HOH A 53 454 129 HOH HOH . G 4 HOH A 54 455 131 HOH HOH . G 4 HOH A 55 456 132 HOH HOH . G 4 HOH A 56 457 134 HOH HOH . G 4 HOH A 57 458 136 HOH HOH . G 4 HOH A 58 459 139 HOH HOH . G 4 HOH A 59 460 140 HOH HOH . G 4 HOH A 60 461 141 HOH HOH . G 4 HOH A 61 462 143 HOH HOH . G 4 HOH A 62 463 145 HOH HOH . G 4 HOH A 63 464 147 HOH HOH . G 4 HOH A 64 465 148 HOH HOH . G 4 HOH A 65 466 149 HOH HOH . G 4 HOH A 66 467 151 HOH HOH . G 4 HOH A 67 468 152 HOH HOH . G 4 HOH A 68 469 154 HOH HOH . G 4 HOH A 69 470 155 HOH HOH . G 4 HOH A 70 471 156 HOH HOH . G 4 HOH A 71 472 159 HOH HOH . G 4 HOH A 72 473 160 HOH HOH . G 4 HOH A 73 474 161 HOH HOH . G 4 HOH A 74 475 164 HOH HOH . G 4 HOH A 75 476 166 HOH HOH . G 4 HOH A 76 477 168 HOH HOH . G 4 HOH A 77 478 169 HOH HOH . G 4 HOH A 78 479 174 HOH HOH . G 4 HOH A 79 480 175 HOH HOH . G 4 HOH A 80 481 177 HOH HOH . G 4 HOH A 81 482 178 HOH HOH . G 4 HOH A 82 483 181 HOH HOH . G 4 HOH A 83 484 183 HOH HOH . G 4 HOH A 84 485 184 HOH HOH . G 4 HOH A 85 486 186 HOH HOH . G 4 HOH A 86 487 189 HOH HOH . G 4 HOH A 87 488 191 HOH HOH . G 4 HOH A 88 489 192 HOH HOH . G 4 HOH A 89 490 193 HOH HOH . G 4 HOH A 90 491 194 HOH HOH . G 4 HOH A 91 492 196 HOH HOH . G 4 HOH A 92 493 198 HOH HOH . G 4 HOH A 93 494 199 HOH HOH . G 4 HOH A 94 495 202 HOH HOH . G 4 HOH A 95 496 204 HOH HOH . G 4 HOH A 96 497 207 HOH HOH . G 4 HOH A 97 498 208 HOH HOH . G 4 HOH A 98 499 211 HOH HOH . G 4 HOH A 99 500 214 HOH HOH . G 4 HOH A 100 501 217 HOH HOH . G 4 HOH A 101 502 225 HOH HOH . G 4 HOH A 102 503 226 HOH HOH . G 4 HOH A 103 504 227 HOH HOH . G 4 HOH A 104 505 228 HOH HOH . G 4 HOH A 105 506 231 HOH HOH . G 4 HOH A 106 507 232 HOH HOH . G 4 HOH A 107 508 234 HOH HOH . G 4 HOH A 108 509 235 HOH HOH . G 4 HOH A 109 510 236 HOH HOH . G 4 HOH A 110 511 237 HOH HOH . G 4 HOH A 111 512 238 HOH HOH . G 4 HOH A 112 513 240 HOH HOH . G 4 HOH A 113 514 246 HOH HOH . G 4 HOH A 114 515 247 HOH HOH . G 4 HOH A 115 516 248 HOH HOH . G 4 HOH A 116 517 250 HOH HOH . G 4 HOH A 117 518 251 HOH HOH . G 4 HOH A 118 519 252 HOH HOH . G 4 HOH A 119 520 253 HOH HOH . H 4 HOH B 1 168 4 HOH HOH . H 4 HOH B 2 169 6 HOH HOH . H 4 HOH B 3 170 8 HOH HOH . H 4 HOH B 4 171 9 HOH HOH . H 4 HOH B 5 172 10 HOH HOH . H 4 HOH B 6 173 11 HOH HOH . H 4 HOH B 7 174 13 HOH HOH . H 4 HOH B 8 175 15 HOH HOH . H 4 HOH B 9 176 17 HOH HOH . H 4 HOH B 10 177 18 HOH HOH . H 4 HOH B 11 178 21 HOH HOH . H 4 HOH B 12 179 24 HOH HOH . H 4 HOH B 13 180 25 HOH HOH . H 4 HOH B 14 181 26 HOH HOH . H 4 HOH B 15 182 27 HOH HOH . H 4 HOH B 16 183 30 HOH HOH . H 4 HOH B 17 184 33 HOH HOH . H 4 HOH B 18 185 34 HOH HOH . H 4 HOH B 19 186 36 HOH HOH . H 4 HOH B 20 187 39 HOH HOH . H 4 HOH B 21 188 40 HOH HOH . H 4 HOH B 22 189 41 HOH HOH . H 4 HOH B 23 190 42 HOH HOH . H 4 HOH B 24 191 44 HOH HOH . H 4 HOH B 25 192 45 HOH HOH . H 4 HOH B 26 193 46 HOH HOH . H 4 HOH B 27 194 50 HOH HOH . H 4 HOH B 28 195 55 HOH HOH . H 4 HOH B 29 196 57 HOH HOH . H 4 HOH B 30 197 59 HOH HOH . H 4 HOH B 31 198 60 HOH HOH . H 4 HOH B 32 199 62 HOH HOH . H 4 HOH B 33 200 63 HOH HOH . H 4 HOH B 34 201 64 HOH HOH . H 4 HOH B 35 202 65 HOH HOH . H 4 HOH B 36 203 66 HOH HOH . H 4 HOH B 37 204 67 HOH HOH . H 4 HOH B 38 205 69 HOH HOH . H 4 HOH B 39 206 71 HOH HOH . H 4 HOH B 40 207 74 HOH HOH . H 4 HOH B 41 208 76 HOH HOH . H 4 HOH B 42 209 77 HOH HOH . H 4 HOH B 43 210 78 HOH HOH . H 4 HOH B 44 211 80 HOH HOH . H 4 HOH B 45 212 83 HOH HOH . H 4 HOH B 46 213 84 HOH HOH . H 4 HOH B 47 214 85 HOH HOH . H 4 HOH B 48 215 86 HOH HOH . H 4 HOH B 49 216 87 HOH HOH . H 4 HOH B 50 217 88 HOH HOH . H 4 HOH B 51 218 89 HOH HOH . H 4 HOH B 52 219 91 HOH HOH . H 4 HOH B 53 220 92 HOH HOH . H 4 HOH B 54 221 93 HOH HOH . H 4 HOH B 55 222 94 HOH HOH . H 4 HOH B 56 223 95 HOH HOH . H 4 HOH B 57 224 98 HOH HOH . H 4 HOH B 58 225 101 HOH HOH . H 4 HOH B 59 226 102 HOH HOH . H 4 HOH B 60 227 103 HOH HOH . H 4 HOH B 61 228 105 HOH HOH . H 4 HOH B 62 229 106 HOH HOH . H 4 HOH B 63 230 109 HOH HOH . H 4 HOH B 64 231 111 HOH HOH . H 4 HOH B 65 232 113 HOH HOH . H 4 HOH B 66 233 115 HOH HOH . H 4 HOH B 67 234 117 HOH HOH . H 4 HOH B 68 235 118 HOH HOH . H 4 HOH B 69 236 119 HOH HOH . H 4 HOH B 70 237 120 HOH HOH . H 4 HOH B 71 238 121 HOH HOH . H 4 HOH B 72 239 122 HOH HOH . H 4 HOH B 73 240 126 HOH HOH . H 4 HOH B 74 241 127 HOH HOH . H 4 HOH B 75 242 130 HOH HOH . H 4 HOH B 76 243 133 HOH HOH . H 4 HOH B 77 244 135 HOH HOH . H 4 HOH B 78 245 137 HOH HOH . H 4 HOH B 79 246 138 HOH HOH . H 4 HOH B 80 247 142 HOH HOH . H 4 HOH B 81 248 144 HOH HOH . H 4 HOH B 82 249 146 HOH HOH . H 4 HOH B 83 250 150 HOH HOH . H 4 HOH B 84 251 153 HOH HOH . H 4 HOH B 85 252 157 HOH HOH . H 4 HOH B 86 253 158 HOH HOH . H 4 HOH B 87 254 162 HOH HOH . H 4 HOH B 88 255 163 HOH HOH . H 4 HOH B 89 256 165 HOH HOH . H 4 HOH B 90 257 167 HOH HOH . H 4 HOH B 91 258 170 HOH HOH . H 4 HOH B 92 259 171 HOH HOH . H 4 HOH B 93 260 172 HOH HOH . H 4 HOH B 94 261 173 HOH HOH . H 4 HOH B 95 262 176 HOH HOH . H 4 HOH B 96 263 179 HOH HOH . H 4 HOH B 97 264 180 HOH HOH . H 4 HOH B 98 265 182 HOH HOH . H 4 HOH B 99 266 185 HOH HOH . H 4 HOH B 100 267 187 HOH HOH . H 4 HOH B 101 268 188 HOH HOH . H 4 HOH B 102 269 190 HOH HOH . H 4 HOH B 103 270 195 HOH HOH . H 4 HOH B 104 271 197 HOH HOH . H 4 HOH B 105 272 200 HOH HOH . H 4 HOH B 106 273 201 HOH HOH . H 4 HOH B 107 274 203 HOH HOH . H 4 HOH B 108 275 205 HOH HOH . H 4 HOH B 109 276 206 HOH HOH . H 4 HOH B 110 277 209 HOH HOH . H 4 HOH B 111 278 210 HOH HOH . H 4 HOH B 112 279 212 HOH HOH . H 4 HOH B 113 280 213 HOH HOH . H 4 HOH B 114 281 215 HOH HOH . H 4 HOH B 115 282 216 HOH HOH . H 4 HOH B 116 283 218 HOH HOH . H 4 HOH B 117 284 219 HOH HOH . H 4 HOH B 118 285 220 HOH HOH . H 4 HOH B 119 286 221 HOH HOH . H 4 HOH B 120 287 222 HOH HOH . H 4 HOH B 121 288 223 HOH HOH . H 4 HOH B 122 289 224 HOH HOH . H 4 HOH B 123 290 229 HOH HOH . H 4 HOH B 124 291 230 HOH HOH . H 4 HOH B 125 292 233 HOH HOH . H 4 HOH B 126 293 239 HOH HOH . H 4 HOH B 127 294 241 HOH HOH . H 4 HOH B 128 295 242 HOH HOH . H 4 HOH B 129 296 243 HOH HOH . H 4 HOH B 130 297 244 HOH HOH . H 4 HOH B 131 298 245 HOH HOH . H 4 HOH B 132 299 249 HOH HOH . H 4 HOH B 133 300 254 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x 28.125 _atom_site.Cartn_y -5.486 _atom_site.Cartn_z 37.526 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 22.05 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 167 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #