data_1VK3 # _model_server_result.job_id 3haGZ30mfnDtQmk3XHv3OQ _model_server_result.datetime_utc '2025-09-09 02:59:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1vk3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":604}' # _entry.id 1VK3 # _exptl.entry_id 1VK3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1VK3 _cell.length_a 59.775 _cell.length_b 72.689 _cell.length_c 128.418 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1VK3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C VAL 39 A VAL 27 1_555 A N MSE 40 A MSE 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale2 A C MSE 40 A MSE 28 1_555 A N TRP 41 A TRP 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale3 A C ALA 109 A ALA 97 1_555 A N MSE 110 A MSE 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 A C MSE 110 A MSE 98 1_555 A N GLY 111 A GLY 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 A C HIS 122 A HIS 110 1_555 A N MSE 123 A MSE 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale6 A C MSE 123 A MSE 111 1_555 A N SER 124 A SER 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale7 A C ASP 173 A ASP 161 1_555 A N MSE 174 A MSE 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale8 A C MSE 174 A MSE 162 1_555 A N LEU 175 A LEU 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale9 A C LYS 228 A LYS 216 1_555 A N MSE 229 A MSE 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale10 A C MSE 229 A MSE 217 1_555 A N LEU 230 A LEU 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale11 A C GLU 236 A GLU 224 1_555 A N MSE 237 A MSE 225 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale12 A C MSE 237 A MSE 225 1_555 A N VAL 238 A VAL 226 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale13 A C ASP 282 A ASP 270 1_555 A N MSE 283 A MSE 271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale14 A C MSE 283 A MSE 271 1_555 A N GLU 284 A GLU 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale15 A C ARG 296 A ARG 284 1_555 A N MSE 297 A MSE 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale16 A C MSE 297 A MSE 285 1_555 A N ALA 298 A ALA 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale17 A C VAL 334 A VAL 322 1_555 A N MSE 335 A MSE 323 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale18 A C MSE 335 A MSE 323 1_555 A N TYR 336 A TYR 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale19 A C VAL 341 A VAL 329 1_555 A N MSE 342 A MSE 330 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale20 A C MSE 342 A MSE 330 1_555 A N GLU 343 A GLU 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale21 A C HIS 387 A HIS 375 1_555 A N MSE 388 A MSE 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale22 A C MSE 388 A MSE 376 1_555 A N VAL 389 A VAL 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale23 A C VAL 403 A VAL 391 1_555 A N MSE 404 A MSE 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale24 A C MSE 404 A MSE 392 1_555 A N ARG 405 A ARG 393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale25 A C ALA 470 A ALA 458 1_555 A N MSE 471 A MSE 459 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale26 A C MSE 471 A MSE 459 1_555 A N MSE 472 A MSE 460 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale27 A C MSE 472 A MSE 460 1_555 A N THR 473 A THR 461 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale28 A C GLY 509 A GLY 497 1_555 A N MSE 510 A MSE 498 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale29 A C MSE 510 A MSE 498 1_555 A N LEU 511 A LEU 499 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale30 A C GLN 591 A GLN 579 1_555 A N MSE 592 A MSE 580 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale31 A C MSE 592 A MSE 580 1_555 A N VAL 593 A VAL 581 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1VK3 _atom_sites.fract_transf_matrix[1][1] 0.016729 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013757 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007787 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 604 222 CL CL . C 3 HOH A 1 605 1 HOH HOH . C 3 HOH A 2 606 2 HOH HOH . C 3 HOH A 3 607 3 HOH HOH . C 3 HOH A 4 608 4 HOH HOH . C 3 HOH A 5 609 5 HOH HOH . C 3 HOH A 6 610 6 HOH HOH . C 3 HOH A 7 611 7 HOH HOH . C 3 HOH A 8 612 8 HOH HOH . C 3 HOH A 9 613 9 HOH HOH . C 3 HOH A 10 614 10 HOH HOH . C 3 HOH A 11 615 11 HOH HOH . C 3 HOH A 12 616 12 HOH HOH . C 3 HOH A 13 617 13 HOH HOH . C 3 HOH A 14 618 14 HOH HOH . C 3 HOH A 15 619 15 HOH HOH . C 3 HOH A 16 620 16 HOH HOH . C 3 HOH A 17 621 17 HOH HOH . C 3 HOH A 18 622 18 HOH HOH . C 3 HOH A 19 623 19 HOH HOH . C 3 HOH A 20 624 20 HOH HOH . C 3 HOH A 21 625 21 HOH HOH . C 3 HOH A 22 626 22 HOH HOH . C 3 HOH A 23 627 23 HOH HOH . C 3 HOH A 24 628 24 HOH HOH . C 3 HOH A 25 629 25 HOH HOH . C 3 HOH A 26 630 26 HOH HOH . C 3 HOH A 27 631 27 HOH HOH . C 3 HOH A 28 632 28 HOH HOH . C 3 HOH A 29 633 29 HOH HOH . C 3 HOH A 30 634 30 HOH HOH . C 3 HOH A 31 635 31 HOH HOH . C 3 HOH A 32 636 32 HOH HOH . C 3 HOH A 33 637 33 HOH HOH . C 3 HOH A 34 638 34 HOH HOH . C 3 HOH A 35 639 35 HOH HOH . C 3 HOH A 36 640 36 HOH HOH . C 3 HOH A 37 641 37 HOH HOH . C 3 HOH A 38 642 38 HOH HOH . C 3 HOH A 39 643 39 HOH HOH . C 3 HOH A 40 644 40 HOH HOH . C 3 HOH A 41 645 41 HOH HOH . C 3 HOH A 42 646 42 HOH HOH . C 3 HOH A 43 647 43 HOH HOH . C 3 HOH A 44 648 44 HOH HOH . C 3 HOH A 45 649 45 HOH HOH . C 3 HOH A 46 650 46 HOH HOH . C 3 HOH A 47 651 47 HOH HOH . C 3 HOH A 48 652 48 HOH HOH . C 3 HOH A 49 653 49 HOH HOH . C 3 HOH A 50 654 50 HOH HOH . C 3 HOH A 51 655 51 HOH HOH . C 3 HOH A 52 656 52 HOH HOH . C 3 HOH A 53 657 53 HOH HOH . C 3 HOH A 54 658 54 HOH HOH . C 3 HOH A 55 659 55 HOH HOH . C 3 HOH A 56 660 56 HOH HOH . C 3 HOH A 57 661 57 HOH HOH . C 3 HOH A 58 662 58 HOH HOH . C 3 HOH A 59 663 59 HOH HOH . C 3 HOH A 60 664 60 HOH HOH . C 3 HOH A 61 665 61 HOH HOH . C 3 HOH A 62 666 62 HOH HOH . C 3 HOH A 63 667 63 HOH HOH . C 3 HOH A 64 668 64 HOH HOH . C 3 HOH A 65 669 65 HOH HOH . C 3 HOH A 66 670 66 HOH HOH . C 3 HOH A 67 671 67 HOH HOH . C 3 HOH A 68 672 68 HOH HOH . C 3 HOH A 69 673 69 HOH HOH . C 3 HOH A 70 674 70 HOH HOH . C 3 HOH A 71 675 71 HOH HOH . C 3 HOH A 72 676 72 HOH HOH . C 3 HOH A 73 677 73 HOH HOH . C 3 HOH A 74 678 74 HOH HOH . C 3 HOH A 75 679 75 HOH HOH . C 3 HOH A 76 680 76 HOH HOH . C 3 HOH A 77 681 77 HOH HOH . C 3 HOH A 78 682 78 HOH HOH . C 3 HOH A 79 683 79 HOH HOH . C 3 HOH A 80 684 80 HOH HOH . C 3 HOH A 81 685 81 HOH HOH . C 3 HOH A 82 686 82 HOH HOH . C 3 HOH A 83 687 83 HOH HOH . C 3 HOH A 84 688 84 HOH HOH . C 3 HOH A 85 689 85 HOH HOH . C 3 HOH A 86 690 86 HOH HOH . C 3 HOH A 87 691 87 HOH HOH . C 3 HOH A 88 692 88 HOH HOH . C 3 HOH A 89 693 89 HOH HOH . C 3 HOH A 90 694 90 HOH HOH . C 3 HOH A 91 695 91 HOH HOH . C 3 HOH A 92 696 92 HOH HOH . C 3 HOH A 93 697 93 HOH HOH . C 3 HOH A 94 698 94 HOH HOH . C 3 HOH A 95 699 95 HOH HOH . C 3 HOH A 96 700 96 HOH HOH . C 3 HOH A 97 701 97 HOH HOH . C 3 HOH A 98 702 98 HOH HOH . C 3 HOH A 99 703 99 HOH HOH . C 3 HOH A 100 704 100 HOH HOH . C 3 HOH A 101 705 101 HOH HOH . C 3 HOH A 102 706 102 HOH HOH . C 3 HOH A 103 707 103 HOH HOH . C 3 HOH A 104 708 104 HOH HOH . C 3 HOH A 105 709 105 HOH HOH . C 3 HOH A 106 710 106 HOH HOH . C 3 HOH A 107 711 107 HOH HOH . C 3 HOH A 108 712 108 HOH HOH . C 3 HOH A 109 713 109 HOH HOH . C 3 HOH A 110 714 110 HOH HOH . C 3 HOH A 111 715 111 HOH HOH . C 3 HOH A 112 716 112 HOH HOH . C 3 HOH A 113 717 113 HOH HOH . C 3 HOH A 114 718 114 HOH HOH . C 3 HOH A 115 719 115 HOH HOH . C 3 HOH A 116 720 116 HOH HOH . C 3 HOH A 117 721 117 HOH HOH . C 3 HOH A 118 722 118 HOH HOH . C 3 HOH A 119 723 119 HOH HOH . C 3 HOH A 120 724 120 HOH HOH . C 3 HOH A 121 725 121 HOH HOH . C 3 HOH A 122 726 122 HOH HOH . C 3 HOH A 123 727 123 HOH HOH . C 3 HOH A 124 728 124 HOH HOH . C 3 HOH A 125 729 125 HOH HOH . C 3 HOH A 126 730 126 HOH HOH . C 3 HOH A 127 731 127 HOH HOH . C 3 HOH A 128 732 128 HOH HOH . C 3 HOH A 129 733 129 HOH HOH . C 3 HOH A 130 734 130 HOH HOH . C 3 HOH A 131 735 131 HOH HOH . C 3 HOH A 132 736 132 HOH HOH . C 3 HOH A 133 737 133 HOH HOH . C 3 HOH A 134 738 134 HOH HOH . C 3 HOH A 135 739 135 HOH HOH . C 3 HOH A 136 740 136 HOH HOH . C 3 HOH A 137 741 137 HOH HOH . C 3 HOH A 138 742 138 HOH HOH . C 3 HOH A 139 743 139 HOH HOH . C 3 HOH A 140 744 140 HOH HOH . C 3 HOH A 141 745 141 HOH HOH . C 3 HOH A 142 746 142 HOH HOH . C 3 HOH A 143 747 143 HOH HOH . C 3 HOH A 144 748 144 HOH HOH . C 3 HOH A 145 749 145 HOH HOH . C 3 HOH A 146 750 146 HOH HOH . C 3 HOH A 147 751 147 HOH HOH . C 3 HOH A 148 752 148 HOH HOH . C 3 HOH A 149 753 149 HOH HOH . C 3 HOH A 150 754 150 HOH HOH . C 3 HOH A 151 755 151 HOH HOH . C 3 HOH A 152 756 152 HOH HOH . C 3 HOH A 153 757 153 HOH HOH . C 3 HOH A 154 758 154 HOH HOH . C 3 HOH A 155 759 155 HOH HOH . C 3 HOH A 156 760 156 HOH HOH . C 3 HOH A 157 761 157 HOH HOH . C 3 HOH A 158 762 158 HOH HOH . C 3 HOH A 159 763 159 HOH HOH . C 3 HOH A 160 764 160 HOH HOH . C 3 HOH A 161 765 161 HOH HOH . C 3 HOH A 162 766 162 HOH HOH . C 3 HOH A 163 767 163 HOH HOH . C 3 HOH A 164 768 164 HOH HOH . C 3 HOH A 165 769 165 HOH HOH . C 3 HOH A 166 770 166 HOH HOH . C 3 HOH A 167 771 167 HOH HOH . C 3 HOH A 168 772 168 HOH HOH . C 3 HOH A 169 773 169 HOH HOH . C 3 HOH A 170 774 170 HOH HOH . C 3 HOH A 171 775 171 HOH HOH . C 3 HOH A 172 776 172 HOH HOH . C 3 HOH A 173 777 173 HOH HOH . C 3 HOH A 174 778 174 HOH HOH . C 3 HOH A 175 779 175 HOH HOH . C 3 HOH A 176 780 176 HOH HOH . C 3 HOH A 177 781 177 HOH HOH . C 3 HOH A 178 782 178 HOH HOH . C 3 HOH A 179 783 179 HOH HOH . C 3 HOH A 180 784 180 HOH HOH . C 3 HOH A 181 785 181 HOH HOH . C 3 HOH A 182 786 182 HOH HOH . C 3 HOH A 183 787 183 HOH HOH . C 3 HOH A 184 788 184 HOH HOH . C 3 HOH A 185 789 185 HOH HOH . C 3 HOH A 186 790 186 HOH HOH . C 3 HOH A 187 791 187 HOH HOH . C 3 HOH A 188 792 188 HOH HOH . C 3 HOH A 189 793 189 HOH HOH . C 3 HOH A 190 794 190 HOH HOH . C 3 HOH A 191 795 191 HOH HOH . C 3 HOH A 192 796 192 HOH HOH . C 3 HOH A 193 797 193 HOH HOH . C 3 HOH A 194 798 194 HOH HOH . C 3 HOH A 195 799 195 HOH HOH . C 3 HOH A 196 800 196 HOH HOH . C 3 HOH A 197 801 197 HOH HOH . C 3 HOH A 198 802 198 HOH HOH . C 3 HOH A 199 803 199 HOH HOH . C 3 HOH A 200 804 200 HOH HOH . C 3 HOH A 201 805 201 HOH HOH . C 3 HOH A 202 806 202 HOH HOH . C 3 HOH A 203 807 203 HOH HOH . C 3 HOH A 204 808 204 HOH HOH . C 3 HOH A 205 809 205 HOH HOH . C 3 HOH A 206 810 206 HOH HOH . C 3 HOH A 207 811 207 HOH HOH . C 3 HOH A 208 812 208 HOH HOH . C 3 HOH A 209 813 209 HOH HOH . C 3 HOH A 210 814 210 HOH HOH . C 3 HOH A 211 815 211 HOH HOH . C 3 HOH A 212 816 212 HOH HOH . C 3 HOH A 213 817 213 HOH HOH . C 3 HOH A 214 818 214 HOH HOH . C 3 HOH A 215 819 215 HOH HOH . C 3 HOH A 216 820 216 HOH HOH . C 3 HOH A 217 821 217 HOH HOH . C 3 HOH A 218 822 218 HOH HOH . C 3 HOH A 219 823 219 HOH HOH . C 3 HOH A 220 824 220 HOH HOH . C 3 HOH A 221 825 221 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 2.71 _atom_site.Cartn_y 49.669 _atom_site.Cartn_z 30.183 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 51.2 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 604 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #