data_1VM1
#
_model_server_result.job_id            3qdknoeeBsOK8VegxOQSiA 
_model_server_result.datetime_utc      '2024-11-05 23:33:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1vm1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
#
_entry.id    1VM1 
#
_exptl.entry_id    1VM1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     'From Hampton Research, made by Analabs.' 
_entity.formula_weight              302.307 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'TAZOBACTAM INTERMEDIATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1VM1 
_cell.length_a            49.2 
_cell.length_b            56.1 
_cell.length_c            82.5 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1VM1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 52 A CYS 77 1_555 A SG CYS 98 A CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
covale ? covale1 A OG SER 45 A SER 70 1_555 C C7 TBE . A TBE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.31 ? 
covale ? covale2 A OG SER 105 A SER 130 1_555 D CB AKR . A AKR 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.37 ? 
#
_chem_comp.formula           'C10 H14 N4 O5 S' 
_chem_comp.formula_weight    302.307 
_chem_comp.id                TBE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'TAZOBACTAM INTERMEDIATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S1 O12 TBE doub 413 n n 
S1 O13 TBE doub 414 n n 
S1 C2 TBE sing 415 n n 
C2 C3 TBE sing 416 n n 
C2 C20 TBE sing 417 n n 
C2 C14 TBE sing 418 n n 
C3 N4 TBE sing 419 n n 
C3 C9 TBE sing 420 n n 
C3 H3 TBE sing 421 n n 
N4 C5 TBE sing 422 n n 
N4 HN4 TBE sing 423 n n 
C5 C6 TBE doub 424 z n 
C5 H5 TBE sing 425 n n 
C20 H201 TBE sing 426 n n 
C20 H202 TBE sing 427 n n 
C20 H203 TBE sing 428 n n 
C14 N15 TBE sing 429 n n 
C14 H141 TBE sing 430 n n 
C14 H142 TBE sing 431 n n 
N15 N16 TBE sing 432 n y 
N15 C19 TBE sing 433 n y 
N16 N17 TBE doub 434 n y 
N17 C18 TBE sing 435 n y 
C18 C19 TBE doub 436 n y 
C18 H18 TBE sing 437 n n 
C19 H19 TBE sing 438 n n 
C9 O10 TBE sing 439 n n 
C9 O11 TBE doub 440 n n 
O10 H10 TBE sing 441 n n 
C6 C7 TBE sing 442 n n 
C6 H6 TBE sing 443 n n 
C7 O8 TBE doub 444 n n 
C7 H7 TBE sing 445 n n 
HS1 S1 TBE sing 446 n n 
#
_atom_sites.entry_id                     1VM1 
_atom_sites.fract_transf_matrix[1][1]    0.020325 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017825 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012121 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MA4 A 1 300 300 MA4 MA4 . 
C 3 TBE A 1 501 501 TBE TBE . 
D 4 AKR A 1 503 503 AKR AKR . 
E 5 TAZ A 1 504 504 TAZ TAZ . 
F 2 MA4 A 1 301 301 MA4 MA4 . 
G 6 HOH A 1 601 601 HOH HOH . 
G 6 HOH A 2 602 602 HOH HOH . 
G 6 HOH A 3 603 603 HOH HOH . 
G 6 HOH A 4 604 604 HOH HOH . 
G 6 HOH A 5 605 605 HOH HOH . 
G 6 HOH A 6 606 606 HOH HOH . 
G 6 HOH A 7 607 607 HOH HOH . 
G 6 HOH A 8 608 608 HOH HOH . 
G 6 HOH A 9 609 609 HOH HOH . 
G 6 HOH A 10 610 610 HOH HOH . 
G 6 HOH A 11 611 611 HOH HOH . 
G 6 HOH A 12 612 612 HOH HOH . 
G 6 HOH A 13 613 613 HOH HOH . 
G 6 HOH A 14 614 614 HOH HOH . 
G 6 HOH A 15 615 615 HOH HOH . 
G 6 HOH A 16 616 616 HOH HOH . 
G 6 HOH A 17 617 617 HOH HOH . 
G 6 HOH A 18 618 618 HOH HOH . 
G 6 HOH A 19 619 619 HOH HOH . 
G 6 HOH A 20 620 620 HOH HOH . 
G 6 HOH A 21 621 621 HOH HOH . 
G 6 HOH A 22 622 622 HOH HOH . 
G 6 HOH A 23 623 623 HOH HOH . 
G 6 HOH A 24 624 624 HOH HOH . 
G 6 HOH A 25 625 625 HOH HOH . 
G 6 HOH A 26 626 626 HOH HOH . 
G 6 HOH A 27 627 627 HOH HOH . 
G 6 HOH A 28 628 628 HOH HOH . 
G 6 HOH A 29 629 629 HOH HOH . 
G 6 HOH A 30 630 630 HOH HOH . 
G 6 HOH A 31 631 631 HOH HOH . 
G 6 HOH A 32 632 632 HOH HOH . 
G 6 HOH A 33 633 633 HOH HOH . 
G 6 HOH A 34 634 634 HOH HOH . 
G 6 HOH A 35 635 635 HOH HOH . 
G 6 HOH A 36 636 636 HOH HOH . 
G 6 HOH A 37 637 637 HOH HOH . 
G 6 HOH A 38 638 638 HOH HOH . 
G 6 HOH A 39 639 639 HOH HOH . 
G 6 HOH A 40 640 640 HOH HOH . 
G 6 HOH A 41 641 641 HOH HOH . 
G 6 HOH A 42 642 642 HOH HOH . 
G 6 HOH A 43 643 643 HOH HOH . 
G 6 HOH A 44 644 644 HOH HOH . 
G 6 HOH A 45 645 645 HOH HOH . 
G 6 HOH A 46 646 646 HOH HOH . 
G 6 HOH A 47 647 647 HOH HOH . 
G 6 HOH A 48 648 648 HOH HOH . 
G 6 HOH A 49 649 649 HOH HOH . 
G 6 HOH A 50 650 650 HOH HOH . 
G 6 HOH A 51 651 651 HOH HOH . 
G 6 HOH A 52 652 652 HOH HOH . 
G 6 HOH A 53 653 653 HOH HOH . 
G 6 HOH A 54 654 654 HOH HOH . 
G 6 HOH A 55 655 655 HOH HOH . 
G 6 HOH A 56 656 656 HOH HOH . 
G 6 HOH A 57 657 657 HOH HOH . 
G 6 HOH A 58 658 658 HOH HOH . 
G 6 HOH A 59 659 659 HOH HOH . 
G 6 HOH A 60 660 660 HOH HOH . 
G 6 HOH A 61 661 661 HOH HOH . 
G 6 HOH A 62 662 662 HOH HOH . 
G 6 HOH A 63 663 663 HOH HOH . 
G 6 HOH A 64 664 664 HOH HOH . 
G 6 HOH A 65 665 665 HOH HOH . 
G 6 HOH A 66 666 666 HOH HOH . 
G 6 HOH A 67 667 667 HOH HOH . 
G 6 HOH A 68 668 668 HOH HOH . 
G 6 HOH A 69 669 669 HOH HOH . 
G 6 HOH A 70 670 670 HOH HOH . 
G 6 HOH A 71 671 671 HOH HOH . 
G 6 HOH A 72 672 672 HOH HOH . 
G 6 HOH A 73 673 673 HOH HOH . 
G 6 HOH A 74 674 674 HOH HOH . 
G 6 HOH A 75 675 675 HOH HOH . 
G 6 HOH A 76 676 676 HOH HOH . 
G 6 HOH A 77 677 677 HOH HOH . 
G 6 HOH A 78 678 678 HOH HOH . 
G 6 HOH A 79 679 679 HOH HOH . 
G 6 HOH A 80 680 680 HOH HOH . 
G 6 HOH A 81 681 681 HOH HOH . 
G 6 HOH A 82 682 682 HOH HOH . 
G 6 HOH A 83 683 683 HOH HOH . 
G 6 HOH A 84 684 684 HOH HOH . 
G 6 HOH A 85 685 685 HOH HOH . 
G 6 HOH A 86 686 686 HOH HOH . 
G 6 HOH A 87 687 687 HOH HOH . 
G 6 HOH A 88 688 688 HOH HOH . 
G 6 HOH A 89 689 689 HOH HOH . 
G 6 HOH A 90 690 690 HOH HOH . 
G 6 HOH A 91 691 691 HOH HOH . 
G 6 HOH A 92 692 692 HOH HOH . 
G 6 HOH A 93 693 693 HOH HOH . 
G 6 HOH A 94 694 694 HOH HOH . 
G 6 HOH A 95 695 695 HOH HOH . 
G 6 HOH A 96 696 696 HOH HOH . 
G 6 HOH A 97 697 697 HOH HOH . 
G 6 HOH A 98 698 698 HOH HOH . 
G 6 HOH A 99 699 699 HOH HOH . 
G 6 HOH A 100 700 700 HOH HOH . 
G 6 HOH A 101 701 701 HOH HOH . 
G 6 HOH A 102 702 702 HOH HOH . 
G 6 HOH A 103 703 703 HOH HOH . 
G 6 HOH A 104 704 704 HOH HOH . 
G 6 HOH A 105 705 705 HOH HOH . 
G 6 HOH A 106 706 706 HOH HOH . 
G 6 HOH A 107 707 707 HOH HOH . 
G 6 HOH A 108 708 708 HOH HOH . 
G 6 HOH A 109 709 709 HOH HOH . 
G 6 HOH A 110 710 710 HOH HOH . 
G 6 HOH A 111 711 711 HOH HOH . 
G 6 HOH A 112 712 712 HOH HOH . 
G 6 HOH A 113 713 713 HOH HOH . 
G 6 HOH A 114 714 714 HOH HOH . 
G 6 HOH A 115 715 715 HOH HOH . 
G 6 HOH A 116 716 716 HOH HOH . 
G 6 HOH A 117 717 717 HOH HOH . 
G 6 HOH A 118 718 718 HOH HOH . 
G 6 HOH A 119 719 719 HOH HOH . 
G 6 HOH A 120 720 720 HOH HOH . 
G 6 HOH A 121 721 721 HOH HOH . 
G 6 HOH A 122 722 722 HOH HOH . 
G 6 HOH A 123 723 723 HOH HOH . 
G 6 HOH A 124 724 724 HOH HOH . 
G 6 HOH A 125 725 725 HOH HOH . 
G 6 HOH A 126 726 726 HOH HOH . 
G 6 HOH A 127 727 727 HOH HOH . 
G 6 HOH A 128 728 728 HOH HOH . 
G 6 HOH A 129 729 729 HOH HOH . 
G 6 HOH A 130 730 730 HOH HOH . 
G 6 HOH A 131 731 731 HOH HOH . 
G 6 HOH A 132 732 732 HOH HOH . 
G 6 HOH A 133 733 733 HOH HOH . 
G 6 HOH A 134 734 734 HOH HOH . 
G 6 HOH A 135 735 735 HOH HOH . 
G 6 HOH A 136 736 736 HOH HOH . 
G 6 HOH A 137 737 737 HOH HOH . 
G 6 HOH A 138 738 738 HOH HOH . 
G 6 HOH A 139 739 739 HOH HOH . 
G 6 HOH A 140 740 740 HOH HOH . 
G 6 HOH A 141 741 741 HOH HOH . 
G 6 HOH A 142 742 742 HOH HOH . 
G 6 HOH A 143 743 743 HOH HOH . 
G 6 HOH A 144 744 744 HOH HOH . 
G 6 HOH A 145 746 746 HOH HOH . 
G 6 HOH A 146 747 747 HOH HOH . 
G 6 HOH A 147 748 748 HOH HOH . 
G 6 HOH A 148 749 749 HOH HOH . 
G 6 HOH A 149 750 750 HOH HOH . 
G 6 HOH A 150 751 751 HOH HOH . 
G 6 HOH A 151 752 752 HOH HOH . 
G 6 HOH A 152 753 753 HOH HOH . 
G 6 HOH A 153 754 754 HOH HOH . 
G 6 HOH A 154 755 755 HOH HOH . 
G 6 HOH A 155 756 756 HOH HOH . 
G 6 HOH A 156 757 757 HOH HOH . 
G 6 HOH A 157 758 758 HOH HOH . 
G 6 HOH A 158 759 759 HOH HOH . 
G 6 HOH A 159 760 760 HOH HOH . 
G 6 HOH A 160 761 761 HOH HOH . 
G 6 HOH A 161 762 762 HOH HOH . 
G 6 HOH A 162 763 763 HOH HOH . 
G 6 HOH A 163 764 764 HOH HOH . 
G 6 HOH A 164 765 765 HOH HOH . 
G 6 HOH A 165 766 766 HOH HOH . 
G 6 HOH A 166 767 767 HOH HOH . 
G 6 HOH A 167 768 768 HOH HOH . 
G 6 HOH A 168 769 769 HOH HOH . 
G 6 HOH A 169 770 770 HOH HOH . 
G 6 HOH A 170 771 771 HOH HOH . 
G 6 HOH A 171 772 772 HOH HOH . 
G 6 HOH A 172 776 776 HOH HOH . 
G 6 HOH A 173 784 784 HOH HOH . 
G 6 HOH A 174 785 785 HOH HOH . 
G 6 HOH A 175 786 786 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S1 TBE . . . C 3 31.093 65.276 1.479 0.5 35.18 ? S1 TBE 501 A 1 
HETATM 2 O O12 TBE . . . C 3 29.853 64.644 1.886 0.5 35.04 ? O12 TBE 501 A 1 
HETATM 3 O O13 TBE . . . C 3 32.363 64.536 1.605 0.5 34.81 ? O13 TBE 501 A 1 
HETATM 4 C C2 TBE . . . C 3 31.246 66.704 2.489 0.5 32.75 ? C2 TBE 501 A 1 
HETATM 5 C C3 TBE . . . C 3 32.193 66.538 3.74 0.5 29.45 ? C3 TBE 501 A 1 
HETATM 6 N N4 TBE . . . C 3 32.654 65.144 3.696 0.5 25.87 ? N4 TBE 501 A 1 
HETATM 7 C C5 TBE . . . C 3 32.21 64.52 4.737 0.5 20.96 ? C5 TBE 501 A 1 
HETATM 8 C C20 TBE . . . C 3 31.842 67.797 1.595 0.5 31.94 ? C20 TBE 501 A 1 
HETATM 9 C C14 TBE . . . C 3 29.76 66.873 2.827 0.5 33.6 ? C14 TBE 501 A 1 
HETATM 10 N N15 TBE . . . C 3 29.466 67.748 3.951 0.5 34.1 ? N15 TBE 501 A 1 
HETATM 11 N N16 TBE . . . C 3 29.482 69.029 3.721 0.5 36.17 ? N16 TBE 501 A 1 
HETATM 12 N N17 TBE . . . C 3 29.624 69.667 4.858 0.5 35.77 ? N17 TBE 501 A 1 
HETATM 13 C C18 TBE . . . C 3 29.696 68.77 5.844 0.5 35.69 ? C18 TBE 501 A 1 
HETATM 14 C C19 TBE . . . C 3 29.597 67.548 5.263 0.5 35.14 ? C19 TBE 501 A 1 
HETATM 15 C C9 TBE . . . C 3 33.509 67.288 3.942 0.5 28.81 ? C9 TBE 501 A 1 
HETATM 16 O O10 TBE . . . C 3 34.509 67.132 3.201 0.5 28.49 ? O10 TBE 501 A 1 
HETATM 17 O O11 TBE . . . C 3 33.67 68.102 4.895 0.5 27.98 ? O11 TBE 501 A 1 
HETATM 18 C C6 TBE . . . C 3 31.82 63.066 4.542 0.5 15.5 ? C6 TBE 501 A 1 
HETATM 19 C C7 TBE . . . C 3 32.817 62.257 5.351 0.5 13.54 ? C7 TBE 501 A 1 
HETATM 20 O O8 TBE . . . C 3 33.735 62.673 6.001 0.5 8.05 ? O8 TBE 501 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           362 
_model_server_stats.encode_time_ms          13 
_model_server_stats.element_count           20 
#