data_1VMD
#
_model_server_result.job_id            j7oM6csDYiIHNKVBTi0lXA 
_model_server_result.datetime_utc      '2025-09-10 16:00:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1vmd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":168}' 
#
_entry.id    1VMD 
#
_exptl.entry_id    1VMD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              35.453 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHLORIDE ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1VMD 
_cell.length_a            130.243 
_cell.length_b            130.243 
_cell.length_c            130.243 
_cell.Z_PDB               48 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1VMD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        197 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 3' 
#
_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 
3 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
_chem_comp.formula           'Cl -1' 
_chem_comp.formula_weight    35.453 
_chem_comp.id                CL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHLORIDE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1VMD 
_atom_sites.fract_transf_matrix[1][1]    0.007678 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007678 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007678 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SO4 A 1 167 1 SO4 SO4 . 
D 3 CL A 1 168 4 CL CL . 
E 2 SO4 B 1 167 2 SO4 SO4 . 
F 3 CL B 1 168 3 CL CL . 
G 4 HOH A 1 169 10 HOH HOH . 
G 4 HOH A 2 170 12 HOH HOH . 
G 4 HOH A 3 171 13 HOH HOH . 
G 4 HOH A 4 172 16 HOH HOH . 
G 4 HOH A 5 173 20 HOH HOH . 
G 4 HOH A 6 174 22 HOH HOH . 
G 4 HOH A 7 175 23 HOH HOH . 
G 4 HOH A 8 176 24 HOH HOH . 
G 4 HOH A 9 177 28 HOH HOH . 
G 4 HOH A 10 178 30 HOH HOH . 
G 4 HOH A 11 179 36 HOH HOH . 
G 4 HOH A 12 180 37 HOH HOH . 
G 4 HOH A 13 181 39 HOH HOH . 
G 4 HOH A 14 182 40 HOH HOH . 
G 4 HOH A 15 183 41 HOH HOH . 
G 4 HOH A 16 184 42 HOH HOH . 
G 4 HOH A 17 185 43 HOH HOH . 
G 4 HOH A 18 186 44 HOH HOH . 
G 4 HOH A 19 187 45 HOH HOH . 
G 4 HOH A 20 188 46 HOH HOH . 
G 4 HOH A 21 189 47 HOH HOH . 
G 4 HOH A 22 190 48 HOH HOH . 
G 4 HOH A 23 191 49 HOH HOH . 
G 4 HOH A 24 192 50 HOH HOH . 
G 4 HOH A 25 193 51 HOH HOH . 
G 4 HOH A 26 194 55 HOH HOH . 
G 4 HOH A 27 195 56 HOH HOH . 
G 4 HOH A 28 196 58 HOH HOH . 
G 4 HOH A 29 197 59 HOH HOH . 
G 4 HOH A 30 198 60 HOH HOH . 
G 4 HOH A 31 199 61 HOH HOH . 
G 4 HOH A 32 200 64 HOH HOH . 
G 4 HOH A 33 201 66 HOH HOH . 
G 4 HOH A 34 202 67 HOH HOH . 
G 4 HOH A 35 203 68 HOH HOH . 
G 4 HOH A 36 204 69 HOH HOH . 
G 4 HOH A 37 205 72 HOH HOH . 
G 4 HOH A 38 206 74 HOH HOH . 
G 4 HOH A 39 207 78 HOH HOH . 
G 4 HOH A 40 208 83 HOH HOH . 
G 4 HOH A 41 209 84 HOH HOH . 
G 4 HOH A 42 210 86 HOH HOH . 
G 4 HOH A 43 211 87 HOH HOH . 
G 4 HOH A 44 212 89 HOH HOH . 
G 4 HOH A 45 213 90 HOH HOH . 
G 4 HOH A 46 214 91 HOH HOH . 
G 4 HOH A 47 215 93 HOH HOH . 
G 4 HOH A 48 216 96 HOH HOH . 
G 4 HOH A 49 217 99 HOH HOH . 
G 4 HOH A 50 218 100 HOH HOH . 
G 4 HOH A 51 219 101 HOH HOH . 
G 4 HOH A 52 220 102 HOH HOH . 
G 4 HOH A 53 221 103 HOH HOH . 
G 4 HOH A 54 222 105 HOH HOH . 
G 4 HOH A 55 223 106 HOH HOH . 
G 4 HOH A 56 224 107 HOH HOH . 
G 4 HOH A 57 225 108 HOH HOH . 
G 4 HOH A 58 226 109 HOH HOH . 
G 4 HOH A 59 227 111 HOH HOH . 
G 4 HOH A 60 228 114 HOH HOH . 
G 4 HOH A 61 229 115 HOH HOH . 
G 4 HOH A 62 230 116 HOH HOH . 
G 4 HOH A 63 231 117 HOH HOH . 
G 4 HOH A 64 232 119 HOH HOH . 
G 4 HOH A 65 233 120 HOH HOH . 
G 4 HOH A 66 234 125 HOH HOH . 
G 4 HOH A 67 235 128 HOH HOH . 
G 4 HOH A 68 236 129 HOH HOH . 
G 4 HOH A 69 237 130 HOH HOH . 
G 4 HOH A 70 238 131 HOH HOH . 
G 4 HOH A 71 239 132 HOH HOH . 
G 4 HOH A 72 240 138 HOH HOH . 
G 4 HOH A 73 241 140 HOH HOH . 
G 4 HOH A 74 242 142 HOH HOH . 
G 4 HOH A 75 243 143 HOH HOH . 
G 4 HOH A 76 244 145 HOH HOH . 
H 4 HOH B 1 169 5 HOH HOH . 
H 4 HOH B 2 170 6 HOH HOH . 
H 4 HOH B 3 171 7 HOH HOH . 
H 4 HOH B 4 172 8 HOH HOH . 
H 4 HOH B 5 173 9 HOH HOH . 
H 4 HOH B 6 174 11 HOH HOH . 
H 4 HOH B 7 175 14 HOH HOH . 
H 4 HOH B 8 176 15 HOH HOH . 
H 4 HOH B 9 177 17 HOH HOH . 
H 4 HOH B 10 178 18 HOH HOH . 
H 4 HOH B 11 179 19 HOH HOH . 
H 4 HOH B 12 180 21 HOH HOH . 
H 4 HOH B 13 181 25 HOH HOH . 
H 4 HOH B 14 182 26 HOH HOH . 
H 4 HOH B 15 183 27 HOH HOH . 
H 4 HOH B 16 184 29 HOH HOH . 
H 4 HOH B 17 185 31 HOH HOH . 
H 4 HOH B 18 186 32 HOH HOH . 
H 4 HOH B 19 187 33 HOH HOH . 
H 4 HOH B 20 188 34 HOH HOH . 
H 4 HOH B 21 189 35 HOH HOH . 
H 4 HOH B 22 190 38 HOH HOH . 
H 4 HOH B 23 191 52 HOH HOH . 
H 4 HOH B 24 192 53 HOH HOH . 
H 4 HOH B 25 193 54 HOH HOH . 
H 4 HOH B 26 194 57 HOH HOH . 
H 4 HOH B 27 195 62 HOH HOH . 
H 4 HOH B 28 196 63 HOH HOH . 
H 4 HOH B 29 197 65 HOH HOH . 
H 4 HOH B 30 198 70 HOH HOH . 
H 4 HOH B 31 199 71 HOH HOH . 
H 4 HOH B 32 200 73 HOH HOH . 
H 4 HOH B 33 201 75 HOH HOH . 
H 4 HOH B 34 202 76 HOH HOH . 
H 4 HOH B 35 203 77 HOH HOH . 
H 4 HOH B 36 204 79 HOH HOH . 
H 4 HOH B 37 205 80 HOH HOH . 
H 4 HOH B 38 206 81 HOH HOH . 
H 4 HOH B 39 207 82 HOH HOH . 
H 4 HOH B 40 208 85 HOH HOH . 
H 4 HOH B 41 209 88 HOH HOH . 
H 4 HOH B 42 210 92 HOH HOH . 
H 4 HOH B 43 211 94 HOH HOH . 
H 4 HOH B 44 212 95 HOH HOH . 
H 4 HOH B 45 213 97 HOH HOH . 
H 4 HOH B 46 214 98 HOH HOH . 
H 4 HOH B 47 215 104 HOH HOH . 
H 4 HOH B 48 216 110 HOH HOH . 
H 4 HOH B 49 217 112 HOH HOH . 
H 4 HOH B 50 218 113 HOH HOH . 
H 4 HOH B 51 219 118 HOH HOH . 
H 4 HOH B 52 220 121 HOH HOH . 
H 4 HOH B 53 221 122 HOH HOH . 
H 4 HOH B 54 222 123 HOH HOH . 
H 4 HOH B 55 223 124 HOH HOH . 
H 4 HOH B 56 224 126 HOH HOH . 
H 4 HOH B 57 225 127 HOH HOH . 
H 4 HOH B 58 226 133 HOH HOH . 
H 4 HOH B 59 227 134 HOH HOH . 
H 4 HOH B 60 228 135 HOH HOH . 
H 4 HOH B 61 229 136 HOH HOH . 
H 4 HOH B 62 230 137 HOH HOH . 
H 4 HOH B 63 231 141 HOH HOH . 
H 4 HOH B 64 232 144 HOH HOH . 
H 4 HOH B 65 233 147 HOH HOH . 
H 4 HOH B 66 234 148 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CL 
_atom_site.label_atom_id         CL 
_atom_site.label_comp_id         CL 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         F 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               52.171 
_atom_site.Cartn_y               39.924 
_atom_site.Cartn_z               23.478 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        30.02 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CL 
_atom_site.auth_comp_id          CL 
_atom_site.auth_seq_id           168 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           247 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#