data_1VPL # _model_server_result.job_id zRc962xJaZ_rLesUWwkNeQ _model_server_result.datetime_utc '2024-12-21 17:15:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1vpl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":245}' # _entry.id 1VPL # _exptl.entry_id 1VPL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1VPL _cell.length_a 90.59 _cell.length_b 90.59 _cell.length_c 72.238 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1VPL _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 72.238 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 1VPL _atom_sites.fract_transf_matrix[1][1] 0.011039 _atom_sites.fract_transf_matrix[1][2] 0.006373 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012746 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013843 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 245 1 SO4 SO4 . C 2 SO4 A 1 246 2 SO4 SO4 . D 3 HOH A 1 247 3 HOH HOH . D 3 HOH A 2 248 4 HOH HOH . D 3 HOH A 3 249 5 HOH HOH . D 3 HOH A 4 250 6 HOH HOH . D 3 HOH A 5 251 7 HOH HOH . D 3 HOH A 6 252 8 HOH HOH . D 3 HOH A 7 253 9 HOH HOH . D 3 HOH A 8 254 10 HOH HOH . D 3 HOH A 9 255 11 HOH HOH . D 3 HOH A 10 256 12 HOH HOH . D 3 HOH A 11 257 13 HOH HOH . D 3 HOH A 12 258 14 HOH HOH . D 3 HOH A 13 259 15 HOH HOH . D 3 HOH A 14 260 16 HOH HOH . D 3 HOH A 15 261 17 HOH HOH . D 3 HOH A 16 262 18 HOH HOH . D 3 HOH A 17 263 19 HOH HOH . D 3 HOH A 18 264 20 HOH HOH . D 3 HOH A 19 265 21 HOH HOH . D 3 HOH A 20 266 22 HOH HOH . D 3 HOH A 21 267 23 HOH HOH . D 3 HOH A 22 268 24 HOH HOH . D 3 HOH A 23 269 25 HOH HOH . D 3 HOH A 24 270 26 HOH HOH . D 3 HOH A 25 271 27 HOH HOH . D 3 HOH A 26 272 28 HOH HOH . D 3 HOH A 27 273 29 HOH HOH . D 3 HOH A 28 274 30 HOH HOH . D 3 HOH A 29 275 31 HOH HOH . D 3 HOH A 30 276 32 HOH HOH . D 3 HOH A 31 277 33 HOH HOH . D 3 HOH A 32 278 34 HOH HOH . D 3 HOH A 33 279 35 HOH HOH . D 3 HOH A 34 280 36 HOH HOH . D 3 HOH A 35 281 37 HOH HOH . D 3 HOH A 36 282 38 HOH HOH . D 3 HOH A 37 283 39 HOH HOH . D 3 HOH A 38 284 40 HOH HOH . D 3 HOH A 39 285 41 HOH HOH . D 3 HOH A 40 286 42 HOH HOH . D 3 HOH A 41 287 43 HOH HOH . D 3 HOH A 42 288 44 HOH HOH . D 3 HOH A 43 289 45 HOH HOH . D 3 HOH A 44 290 46 HOH HOH . D 3 HOH A 45 291 47 HOH HOH . D 3 HOH A 46 292 48 HOH HOH . D 3 HOH A 47 293 49 HOH HOH . D 3 HOH A 48 294 50 HOH HOH . D 3 HOH A 49 295 51 HOH HOH . D 3 HOH A 50 296 52 HOH HOH . D 3 HOH A 51 297 53 HOH HOH . D 3 HOH A 52 298 54 HOH HOH . D 3 HOH A 53 299 55 HOH HOH . D 3 HOH A 54 300 56 HOH HOH . D 3 HOH A 55 301 57 HOH HOH . D 3 HOH A 56 302 58 HOH HOH . D 3 HOH A 57 303 59 HOH HOH . D 3 HOH A 58 304 60 HOH HOH . D 3 HOH A 59 305 61 HOH HOH . D 3 HOH A 60 306 62 HOH HOH . D 3 HOH A 61 307 63 HOH HOH . D 3 HOH A 62 308 64 HOH HOH . D 3 HOH A 63 309 65 HOH HOH . D 3 HOH A 64 310 66 HOH HOH . D 3 HOH A 65 311 67 HOH HOH . D 3 HOH A 66 312 68 HOH HOH . D 3 HOH A 67 313 69 HOH HOH . D 3 HOH A 68 314 70 HOH HOH . D 3 HOH A 69 315 71 HOH HOH . D 3 HOH A 70 316 72 HOH HOH . D 3 HOH A 71 317 73 HOH HOH . D 3 HOH A 72 318 74 HOH HOH . D 3 HOH A 73 319 75 HOH HOH . D 3 HOH A 74 320 76 HOH HOH . D 3 HOH A 75 321 77 HOH HOH . D 3 HOH A 76 322 78 HOH HOH . D 3 HOH A 77 323 79 HOH HOH . D 3 HOH A 78 324 80 HOH HOH . D 3 HOH A 79 325 81 HOH HOH . D 3 HOH A 80 326 82 HOH HOH . D 3 HOH A 81 327 83 HOH HOH . D 3 HOH A 82 328 84 HOH HOH . D 3 HOH A 83 329 85 HOH HOH . D 3 HOH A 84 330 86 HOH HOH . D 3 HOH A 85 331 87 HOH HOH . D 3 HOH A 86 332 88 HOH HOH . D 3 HOH A 87 333 89 HOH HOH . D 3 HOH A 88 334 90 HOH HOH . D 3 HOH A 89 335 91 HOH HOH . D 3 HOH A 90 336 92 HOH HOH . D 3 HOH A 91 337 93 HOH HOH . D 3 HOH A 92 338 94 HOH HOH . D 3 HOH A 93 339 95 HOH HOH . D 3 HOH A 94 340 96 HOH HOH . D 3 HOH A 95 341 97 HOH HOH . D 3 HOH A 96 342 98 HOH HOH . D 3 HOH A 97 343 99 HOH HOH . D 3 HOH A 98 344 100 HOH HOH . D 3 HOH A 99 345 101 HOH HOH . D 3 HOH A 100 346 102 HOH HOH . D 3 HOH A 101 347 103 HOH HOH . D 3 HOH A 102 348 104 HOH HOH . D 3 HOH A 103 349 105 HOH HOH . D 3 HOH A 104 350 106 HOH HOH . D 3 HOH A 105 351 107 HOH HOH . D 3 HOH A 106 352 108 HOH HOH . D 3 HOH A 107 353 109 HOH HOH . D 3 HOH A 108 354 110 HOH HOH . D 3 HOH A 109 355 111 HOH HOH . D 3 HOH A 110 356 112 HOH HOH . D 3 HOH A 111 357 113 HOH HOH . D 3 HOH A 112 358 114 HOH HOH . D 3 HOH A 113 359 115 HOH HOH . D 3 HOH A 114 360 116 HOH HOH . D 3 HOH A 115 361 117 HOH HOH . D 3 HOH A 116 362 118 HOH HOH . D 3 HOH A 117 363 119 HOH HOH . D 3 HOH A 118 364 120 HOH HOH . D 3 HOH A 119 365 121 HOH HOH . D 3 HOH A 120 366 122 HOH HOH . D 3 HOH A 121 367 123 HOH HOH . D 3 HOH A 122 368 124 HOH HOH . D 3 HOH A 123 369 125 HOH HOH . D 3 HOH A 124 370 126 HOH HOH . D 3 HOH A 125 371 127 HOH HOH . D 3 HOH A 126 372 128 HOH HOH . D 3 HOH A 127 373 129 HOH HOH . D 3 HOH A 128 374 130 HOH HOH . D 3 HOH A 129 375 131 HOH HOH . D 3 HOH A 130 376 132 HOH HOH . D 3 HOH A 131 377 133 HOH HOH . D 3 HOH A 132 378 134 HOH HOH . D 3 HOH A 133 379 135 HOH HOH . D 3 HOH A 134 380 136 HOH HOH . D 3 HOH A 135 381 137 HOH HOH . D 3 HOH A 136 382 138 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . B 2 16.839 30.88 20.624 1 23.84 ? S SO4 245 A 1 HETATM 2 O O1 SO4 . . . B 2 17.744 30.515 21.768 1 22.17 ? O1 SO4 245 A 1 HETATM 3 O O2 SO4 . . . B 2 17.52 31.685 19.62 1 23.79 ? O2 SO4 245 A 1 HETATM 4 O O3 SO4 . . . B 2 15.78 31.743 21.099 1 23.64 ? O3 SO4 245 A 1 HETATM 5 O O4 SO4 . . . B 2 16.457 29.569 20.229 1 22.22 ? O4 SO4 245 A 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #