data_1VQV # _model_server_result.job_id nXu0DwnlRN51jCRUuqsjhw _model_server_result.datetime_utc '2024-11-28 09:26:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1vqv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1003}' # _entry.id 1VQV # _exptl.entry_id 1VQV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1VQV _cell.length_a 65.58 _cell.length_b 65.58 _cell.length_c 192.06 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1VQV _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MSE 1 A MSE 1 1_555 A N ARG 2 A ARG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale2 A C LEU 168 A LEU 168 1_555 A N MSE 169 A MSE 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale3 A C MSE 169 A MSE 169 1_555 A N GLU 170 A GLU 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 A C SER 205 A SER 205 1_555 A N MSE 206 A MSE 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale5 A C MSE 206 A MSE 206 1_555 A N ASP 207 A ASP 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale6 A C LYS 241 A LYS 241 1_555 A N MSE 242 A MSE 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale7 A C MSE 242 A MSE 242 1_555 A N TYR 243 A TYR 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale8 A C ASP 278 A ASP 278 1_555 A N MSE 279 A MSE 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale9 A C MSE 279 A MSE 279 1_555 A N THR 280 A THR 280 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale10 B C MSE 1 B MSE 1 1_555 B N ARG 2 B ARG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale11 B C LEU 168 B LEU 168 1_555 B N MSE 169 B MSE 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale12 B C MSE 169 B MSE 169 1_555 B N GLU 170 B GLU 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale13 B C SER 205 B SER 205 1_555 B N MSE 206 B MSE 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale14 B C MSE 206 B MSE 206 1_555 B N ASP 207 B ASP 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale15 B C LYS 241 B LYS 241 1_555 B N MSE 242 B MSE 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale16 B C MSE 242 B MSE 242 1_555 B N TYR 243 B TYR 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale17 B C ASP 278 B ASP 278 1_555 B N MSE 279 B MSE 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale18 B C MSE 279 B MSE 279 1_555 B N THR 280 B THR 280 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 279 n n P O2 PO4 sing 280 n n P O3 PO4 sing 281 n n P O4 PO4 sing 282 n n # _atom_sites.entry_id 1VQV _atom_sites.fract_transf_matrix[1][1] 0.015249 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015249 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005207 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 1001 1001 PO4 PO4 . D 2 PO4 A 1 1002 1002 PO4 PO4 . E 2 PO4 B 1 1003 1003 PO4 PO4 . F 2 PO4 B 1 1004 1004 PO4 PO4 . G 3 HOH A 1 1003 2 HOH HOH . G 3 HOH A 2 1004 5 HOH HOH . G 3 HOH A 3 1005 7 HOH HOH . G 3 HOH A 4 1006 8 HOH HOH . G 3 HOH A 5 1007 14 HOH HOH . G 3 HOH A 6 1008 18 HOH HOH . G 3 HOH A 7 1009 22 HOH HOH . G 3 HOH A 8 1010 23 HOH HOH . G 3 HOH A 9 1011 24 HOH HOH . G 3 HOH A 10 1012 25 HOH HOH . G 3 HOH A 11 1013 27 HOH HOH . G 3 HOH A 12 1014 28 HOH HOH . G 3 HOH A 13 1015 30 HOH HOH . G 3 HOH A 14 1016 31 HOH HOH . G 3 HOH A 15 1017 35 HOH HOH . G 3 HOH A 16 1018 36 HOH HOH . G 3 HOH A 17 1019 38 HOH HOH . G 3 HOH A 18 1020 42 HOH HOH . G 3 HOH A 19 1021 44 HOH HOH . G 3 HOH A 20 1022 46 HOH HOH . G 3 HOH A 21 1023 47 HOH HOH . G 3 HOH A 22 1024 50 HOH HOH . G 3 HOH A 23 1025 51 HOH HOH . G 3 HOH A 24 1026 54 HOH HOH . G 3 HOH A 25 1027 59 HOH HOH . G 3 HOH A 26 1028 60 HOH HOH . G 3 HOH A 27 1029 66 HOH HOH . G 3 HOH A 28 1030 69 HOH HOH . G 3 HOH A 29 1031 70 HOH HOH . G 3 HOH A 30 1032 72 HOH HOH . G 3 HOH A 31 1033 73 HOH HOH . G 3 HOH A 32 1034 75 HOH HOH . G 3 HOH A 33 1035 76 HOH HOH . G 3 HOH A 34 1036 79 HOH HOH . G 3 HOH A 35 1037 82 HOH HOH . G 3 HOH A 36 1038 85 HOH HOH . G 3 HOH A 37 1039 87 HOH HOH . G 3 HOH A 38 1040 90 HOH HOH . G 3 HOH A 39 1041 92 HOH HOH . G 3 HOH A 40 1042 94 HOH HOH . G 3 HOH A 41 1043 95 HOH HOH . G 3 HOH A 42 1044 98 HOH HOH . G 3 HOH A 43 1045 99 HOH HOH . G 3 HOH A 44 1046 100 HOH HOH . G 3 HOH A 45 1047 105 HOH HOH . G 3 HOH A 46 1048 106 HOH HOH . G 3 HOH A 47 1049 110 HOH HOH . G 3 HOH A 48 1050 111 HOH HOH . G 3 HOH A 49 1051 119 HOH HOH . G 3 HOH A 50 1052 120 HOH HOH . H 3 HOH B 1 1005 1 HOH HOH . H 3 HOH B 2 1006 3 HOH HOH . H 3 HOH B 3 1007 4 HOH HOH . H 3 HOH B 4 1008 6 HOH HOH . H 3 HOH B 5 1009 9 HOH HOH . H 3 HOH B 6 1010 10 HOH HOH . H 3 HOH B 7 1011 11 HOH HOH . H 3 HOH B 8 1012 12 HOH HOH . H 3 HOH B 9 1013 13 HOH HOH . H 3 HOH B 10 1014 15 HOH HOH . H 3 HOH B 11 1015 17 HOH HOH . H 3 HOH B 12 1016 19 HOH HOH . H 3 HOH B 13 1017 20 HOH HOH . H 3 HOH B 14 1018 21 HOH HOH . H 3 HOH B 15 1019 26 HOH HOH . H 3 HOH B 16 1020 29 HOH HOH . H 3 HOH B 17 1021 32 HOH HOH . H 3 HOH B 18 1022 34 HOH HOH . H 3 HOH B 19 1023 37 HOH HOH . H 3 HOH B 20 1024 39 HOH HOH . H 3 HOH B 21 1025 40 HOH HOH . H 3 HOH B 22 1026 41 HOH HOH . H 3 HOH B 23 1027 43 HOH HOH . H 3 HOH B 24 1028 45 HOH HOH . H 3 HOH B 25 1029 48 HOH HOH . H 3 HOH B 26 1030 49 HOH HOH . H 3 HOH B 27 1031 52 HOH HOH . H 3 HOH B 28 1032 53 HOH HOH . H 3 HOH B 29 1033 55 HOH HOH . H 3 HOH B 30 1034 56 HOH HOH . H 3 HOH B 31 1035 57 HOH HOH . H 3 HOH B 32 1036 58 HOH HOH . H 3 HOH B 33 1037 61 HOH HOH . H 3 HOH B 34 1038 62 HOH HOH . H 3 HOH B 35 1039 63 HOH HOH . H 3 HOH B 36 1040 64 HOH HOH . H 3 HOH B 37 1041 65 HOH HOH . H 3 HOH B 38 1042 67 HOH HOH . H 3 HOH B 39 1043 68 HOH HOH . H 3 HOH B 40 1044 71 HOH HOH . H 3 HOH B 41 1045 78 HOH HOH . H 3 HOH B 42 1046 80 HOH HOH . H 3 HOH B 43 1047 81 HOH HOH . H 3 HOH B 44 1048 83 HOH HOH . H 3 HOH B 45 1049 84 HOH HOH . H 3 HOH B 46 1050 86 HOH HOH . H 3 HOH B 47 1051 88 HOH HOH . H 3 HOH B 48 1052 89 HOH HOH . H 3 HOH B 49 1053 91 HOH HOH . H 3 HOH B 50 1054 93 HOH HOH . H 3 HOH B 51 1055 96 HOH HOH . H 3 HOH B 52 1056 97 HOH HOH . H 3 HOH B 53 1057 101 HOH HOH . H 3 HOH B 54 1058 102 HOH HOH . H 3 HOH B 55 1059 103 HOH HOH . H 3 HOH B 56 1060 104 HOH HOH . H 3 HOH B 57 1061 107 HOH HOH . H 3 HOH B 58 1062 108 HOH HOH . H 3 HOH B 59 1063 109 HOH HOH . H 3 HOH B 60 1064 113 HOH HOH . H 3 HOH B 61 1065 114 HOH HOH . H 3 HOH B 62 1066 115 HOH HOH . H 3 HOH B 63 1067 116 HOH HOH . H 3 HOH B 64 1068 117 HOH HOH . H 3 HOH B 65 1069 118 HOH HOH . H 3 HOH B 66 1070 121 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . E 2 23.369 39.566 141.029 1 108.58 ? P PO4 1003 B 1 HETATM 2 O O1 PO4 . . . E 2 24.484 40.423 141.484 1 103.2 ? O1 PO4 1003 B 1 HETATM 3 O O2 PO4 . . . E 2 22.365 40.394 140.328 1 103.15 ? O2 PO4 1003 B 1 HETATM 4 O O3 PO4 . . . E 2 23.88 38.539 140.108 1 103.7 ? O3 PO4 1003 B 1 HETATM 5 O O4 PO4 . . . E 2 22.744 38.906 142.2 1 103.04 ? O4 PO4 1003 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 5 #