data_1VSI
#
_model_server_result.job_id            Wtd8AFsSXgxN0A7sMA7rQA 
_model_server_result.datetime_utc      '2024-11-26 23:36:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1vsi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":280}' 
#
_entry.id    1VSI 
#
_exptl.entry_id    1VSI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1VSI 
_cell.length_a            66.15 
_cell.length_b            66.15 
_cell.length_c            80.96 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1VSI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 80.96 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C SER 75 A SER 124 1_555 A N OCY 76 A OCY 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.311 ? 
covale ? covale2 A C OCY 76 A OCY 125 1_555 A N PHE 77 A PHE 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.308 ? 
metalc ? metalc1 A OD1 ASP 15 A ASP 64 1_555 B CA CA . A CA 280 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? 
metalc ? metalc2 A OD2 ASP 72 A ASP 121 1_555 B CA CA . A CA 280 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? 
metalc ? metalc3 B CA CA . A CA 280 1_555 D O HOH . A HOH 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.857 ? 
metalc ? metalc4 B CA CA . A CA 280 1_555 D O HOH . A HOH 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.598 ? 
metalc ? metalc5 B CA CA . A CA 280 1_555 D O HOH . A HOH 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1VSI 
_atom_sites.fract_transf_matrix[1][1]    0.015117 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015117 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012352 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CA A 1 280 280 CA CA . 
C 3 EPE A 1 261 261 EPE EPE . 
D 4 HOH A 1 281 281 HOH HOH . 
D 4 HOH A 2 282 282 HOH HOH . 
D 4 HOH A 3 283 283 HOH HOH . 
D 4 HOH A 4 301 301 HOH HOH . 
D 4 HOH A 5 302 302 HOH HOH . 
D 4 HOH A 6 303 303 HOH HOH . 
D 4 HOH A 7 304 304 HOH HOH . 
D 4 HOH A 8 305 305 HOH HOH . 
D 4 HOH A 9 306 306 HOH HOH . 
D 4 HOH A 10 307 307 HOH HOH . 
D 4 HOH A 11 308 308 HOH HOH . 
D 4 HOH A 12 309 309 HOH HOH . 
D 4 HOH A 13 310 310 HOH HOH . 
D 4 HOH A 14 311 311 HOH HOH . 
D 4 HOH A 15 312 312 HOH HOH . 
D 4 HOH A 16 313 313 HOH HOH . 
D 4 HOH A 17 314 314 HOH HOH . 
D 4 HOH A 18 315 315 HOH HOH . 
D 4 HOH A 19 316 316 HOH HOH . 
D 4 HOH A 20 317 317 HOH HOH . 
D 4 HOH A 21 318 318 HOH HOH . 
D 4 HOH A 22 319 319 HOH HOH . 
D 4 HOH A 23 320 320 HOH HOH . 
D 4 HOH A 24 322 322 HOH HOH . 
D 4 HOH A 25 323 323 HOH HOH . 
D 4 HOH A 26 324 324 HOH HOH . 
D 4 HOH A 27 325 325 HOH HOH . 
D 4 HOH A 28 326 326 HOH HOH . 
D 4 HOH A 29 328 328 HOH HOH . 
D 4 HOH A 30 329 329 HOH HOH . 
D 4 HOH A 31 332 332 HOH HOH . 
D 4 HOH A 32 333 333 HOH HOH . 
D 4 HOH A 33 334 334 HOH HOH . 
D 4 HOH A 34 335 335 HOH HOH . 
D 4 HOH A 35 336 336 HOH HOH . 
D 4 HOH A 36 337 337 HOH HOH . 
D 4 HOH A 37 338 338 HOH HOH . 
D 4 HOH A 38 339 339 HOH HOH . 
D 4 HOH A 39 340 340 HOH HOH . 
D 4 HOH A 40 342 342 HOH HOH . 
D 4 HOH A 41 343 343 HOH HOH . 
D 4 HOH A 42 344 344 HOH HOH . 
D 4 HOH A 43 345 345 HOH HOH . 
D 4 HOH A 44 347 347 HOH HOH . 
D 4 HOH A 45 348 348 HOH HOH . 
D 4 HOH A 46 349 349 HOH HOH . 
D 4 HOH A 47 350 350 HOH HOH . 
D 4 HOH A 48 352 352 HOH HOH . 
D 4 HOH A 49 353 353 HOH HOH . 
D 4 HOH A 50 354 354 HOH HOH . 
D 4 HOH A 51 355 355 HOH HOH . 
D 4 HOH A 52 356 356 HOH HOH . 
D 4 HOH A 53 358 358 HOH HOH . 
D 4 HOH A 54 360 360 HOH HOH . 
D 4 HOH A 55 365 365 HOH HOH . 
D 4 HOH A 56 367 367 HOH HOH . 
D 4 HOH A 57 368 368 HOH HOH . 
D 4 HOH A 58 369 369 HOH HOH . 
D 4 HOH A 59 370 370 HOH HOH . 
D 4 HOH A 60 371 371 HOH HOH . 
D 4 HOH A 61 373 373 HOH HOH . 
D 4 HOH A 62 374 374 HOH HOH . 
D 4 HOH A 63 375 375 HOH HOH . 
D 4 HOH A 64 376 376 HOH HOH . 
D 4 HOH A 65 377 377 HOH HOH . 
D 4 HOH A 66 378 378 HOH HOH . 
D 4 HOH A 67 379 379 HOH HOH . 
D 4 HOH A 68 381 381 HOH HOH . 
D 4 HOH A 69 383 383 HOH HOH . 
D 4 HOH A 70 384 384 HOH HOH . 
D 4 HOH A 71 388 388 HOH HOH . 
D 4 HOH A 72 389 389 HOH HOH . 
D 4 HOH A 73 390 390 HOH HOH . 
D 4 HOH A 74 391 391 HOH HOH . 
D 4 HOH A 75 392 392 HOH HOH . 
D 4 HOH A 76 394 394 HOH HOH . 
D 4 HOH A 77 395 395 HOH HOH . 
D 4 HOH A 78 396 396 HOH HOH . 
D 4 HOH A 79 397 397 HOH HOH . 
D 4 HOH A 80 402 402 HOH HOH . 
D 4 HOH A 81 404 404 HOH HOH . 
D 4 HOH A 82 405 405 HOH HOH . 
D 4 HOH A 83 407 407 HOH HOH . 
D 4 HOH A 84 409 409 HOH HOH . 
D 4 HOH A 85 410 410 HOH HOH . 
D 4 HOH A 86 411 411 HOH HOH . 
D 4 HOH A 87 412 412 HOH HOH . 
D 4 HOH A 88 413 413 HOH HOH . 
D 4 HOH A 89 420 420 HOH HOH . 
D 4 HOH A 90 421 421 HOH HOH . 
D 4 HOH A 91 422 422 HOH HOH . 
D 4 HOH A 92 423 423 HOH HOH . 
D 4 HOH A 93 424 424 HOH HOH . 
D 4 HOH A 94 425 425 HOH HOH . 
D 4 HOH A 95 426 426 HOH HOH . 
D 4 HOH A 96 427 427 HOH HOH . 
D 4 HOH A 97 428 428 HOH HOH . 
D 4 HOH A 98 429 429 HOH HOH . 
D 4 HOH A 99 431 431 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               52.469 
_atom_site.Cartn_y               38.442 
_atom_site.Cartn_z               59.465 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        41.78 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           280 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           246 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#