data_1VTG # _model_server_result.job_id pSt5tXqcmKjWWSEgWmCCbg _model_server_result.datetime_utc '2025-04-11 05:48:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1vtg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":0}' # _entry.id 1VTG # _exptl.entry_id 1VTG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 174.156 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-CARBOXYQUINOXALINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1VTG _cell.length_a 31.35 _cell.length_b 62.38 _cell.length_c 61.26 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1VTG _symmetry.cell_setting ? _symmetry.Int_Tables_number 22 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'F 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG NCY 3 B NCY 3 1_555 B SG NCY 7 B NCY 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.901 sing covale ? covale1 C C QUI . B QUI 0 1_555 B N DSN 1 B DSN 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale2 B C DSN 1 B DSN 1 1_555 B N ALA 2 B ALA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.372 sing covale ? covale3 B OG DSN 1 B DSN 1 1_555 B C MVA 8 B MVA 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.424 sing covale ? covale4 B C NCY 3 B NCY 3 1_555 B N MVA 4 B MVA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.399 sing covale ? covale5 B C MVA 4 B MVA 4 1_555 B OG DSN 5 B DSN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.356 sing covale ? covale6 B C DSN 5 B DSN 5 1_555 B N ALA 6 B ALA 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.365 sing covale ? covale7 B N DSN 5 B DSN 5 1_555 D C QUI . B QUI 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale8 B C NCY 7 B NCY 7 1_555 B N MVA 8 B MVA 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.421 sing hydrog WATSON-CRICK hydrog1 A N3 DC 1 A DC 1 1_555 A N1 DG 6 A DG 6 2_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N4 DC 1 A DC 1 1_555 A O6 DG 6 A DG 6 2_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O2 DC 1 A DC 1 1_555 A N2 DG 6 A DG 6 2_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N1 DG 2 A DG 2 1_555 A N3 DC 5 A DC 5 2_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N2 DG 2 A DG 2 1_555 A O2 DC 5 A DC 5 2_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O6 DG 2 A DG 2 1_555 A N4 DC 5 A DC 5 2_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog HOOGSTEEN hydrog7 A N3 DT 3 A DT 3 1_555 A N7 DA 4 A DA 4 2_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog HOOGSTEEN hydrog8 A O4 DT 3 A DT 3 1_555 A N6 DA 4 A DA 4 2_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog HOOGSTEEN hydrog9 A N6 DA 4 A DA 4 1_555 A O4 DT 3 A DT 3 2_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog HOOGSTEEN hydrog10 A N7 DA 4 A DA 4 1_555 A N3 DT 3 A DT 3 2_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N3 DC 5 A DC 5 1_555 A N1 DG 2 A DG 2 2_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N4 DC 5 A DC 5 1_555 A O6 DG 2 A DG 2 2_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A O2 DC 5 A DC 5 1_555 A N2 DG 2 A DG 2 2_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N1 DG 6 A DG 6 1_555 A N3 DC 1 A DC 1 2_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A N2 DG 6 A DG 6 1_555 A O2 DC 1 A DC 1 2_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A O6 DG 6 A DG 6 1_555 A N4 DC 1 A DC 1 2_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C9 H6 N2 O2' _chem_comp.formula_weight 174.156 _chem_comp.id QUI _chem_comp.mon_nstd_flag . _chem_comp.name 2-CARBOXYQUINOXALINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 QUI doub 212 n y N1 C9 QUI sing 213 n y C2 C3 QUI sing 214 n y C2 C QUI sing 215 n n C3 N4 QUI doub 216 n y C3 H3 QUI sing 217 n n N4 C10 QUI sing 218 n y C5 C6 QUI doub 219 n y C5 C10 QUI sing 220 n y C5 H5 QUI sing 221 n n C6 C7 QUI sing 222 n y C6 H6 QUI sing 223 n n C7 C8 QUI doub 224 n y C7 H7 QUI sing 225 n n C8 C9 QUI sing 226 n y C8 H8 QUI sing 227 n n C9 C10 QUI doub 228 n y C O1 QUI doub 229 n n C O2 QUI sing 230 n n O2 HO2 QUI sing 231 n n # _atom_sites.entry_id 1VTG _atom_sites.fract_transf_matrix[1][1] 0.031898 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016031 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016324 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 QUI B 1 0 0 QUI QUI . D 3 QUI B 1 9 9 QUI QUI . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 QUI . . . C 3 7.355 13.78 7.48 1 7.5 ? N1 QUI 0 B 1 HETATM 2 C C2 QUI . . . C 3 6.518 14.522 8.337 1 8.31 ? C2 QUI 0 B 1 HETATM 3 C C3 QUI . . . C 3 5.499 15.383 7.884 1 7.81 ? C3 QUI 0 B 1 HETATM 4 N N4 QUI . . . C 3 5.304 15.483 6.518 1 7.02 ? N4 QUI 0 B 1 HETATM 5 C C5 QUI . . . C 3 5.862 14.853 4.264 1 8.35 ? C5 QUI 0 B 1 HETATM 6 C C6 QUI . . . C 3 6.684 14.166 3.363 1 8.47 ? C6 QUI 0 B 1 HETATM 7 C C7 QUI . . . C 3 7.731 13.374 3.829 1 8.32 ? C7 QUI 0 B 1 HETATM 8 C C8 QUI . . . C 3 7.903 13.25 5.213 1 7.91 ? C8 QUI 0 B 1 HETATM 9 C C9 QUI . . . C 3 7.12 13.911 6.114 1 7.26 ? C9 QUI 0 B 1 HETATM 10 C C10 QUI . . . C 3 6.101 14.74 5.636 1 7.8 ? C10 QUI 0 B 1 HETATM 11 C C QUI . . . C 3 6.593 14.522 9.789 1 8.8 ? C QUI 0 B 1 HETATM 12 O O1 QUI . . . C 3 5.925 15.202 10.592 1 9.11 ? O1 QUI 0 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #