data_1VTY
#
_model_server_result.job_id            8CJh9-y8q3o_-lMIZCLwag 
_model_server_result.datetime_utc      '2025-09-06 07:47:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1vty 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":7}' 
#
_entry.id    1VTY 
#
_exptl.entry_id    1VTY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              16.023 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'AMINO GROUP' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1VTY 
_cell.length_a            17.86 
_cell.length_b            31.04 
_cell.length_c            44.76 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1VTY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A O3' DC 1 A DC 1 1_555 A P 1AP 2 A 1AP 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.645 ? 
covale ? covale2 B O3' DC 1 B DC 7 1_555 B P 1AP 2 B 1AP 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.554 ? 
metalc ? metalc1 D MG MG . B MG 13 1_555 G O HOH . B HOH 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? 
metalc ? metalc2 D MG MG . B MG 13 1_555 G O HOH . B HOH 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.446 ? 
metalc ? metalc3 D MG MG . B MG 13 1_555 G O HOH . B HOH 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.935 ? 
metalc ? metalc4 D MG MG . B MG 13 1_555 G O HOH . B HOH 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? 
metalc ? metalc5 D MG MG . B MG 13 1_555 G O HOH . B HOH 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? 
hydrog WATSON-CRICK hydrog1 A N3 DC 1 A DC 1 1_555 B N1 DG 6 B DG 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog2 A N4 DC 1 A DC 1 1_555 B O6 DG 6 B DG 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog3 A O2 DC 1 A DC 1 1_555 B N2 DG 6 B DG 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog4 A N3 DC 3 A DC 3 1_555 B N1 DG 4 B DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog5 A N4 DC 3 A DC 3 1_555 B O6 DG 4 B DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog6 A O2 DC 3 A DC 3 1_555 B N2 DG 4 B DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog7 A N1 DG 4 A DG 4 1_555 B N3 DC 3 B DC 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog8 A N2 DG 4 A DG 4 1_555 B O2 DC 3 B DC 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog9 A O6 DG 4 A DG 4 1_555 B N4 DC 3 B DC 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog10 A N1 DG 6 A DG 6 1_555 B N3 DC 1 B DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog11 A N2 DG 6 A DG 6 1_555 B O2 DC 1 B DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog12 A O6 DG 6 A DG 6 1_555 B N4 DC 1 B DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'H2 N' 
_chem_comp.formula_weight    16.023 
_chem_comp.id                NH2 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'AMINO GROUP' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N HN1 NH2 sing 154 n n 
N HN2 NH2 sing 155 n n 
#
_atom_sites.entry_id                     1VTY 
_atom_sites.fract_transf_matrix[1][1]    0.055991 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.032216 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.022341 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NH2 A 1 7 7 NH2 NH2 . 
D 3 MG B 1 13 13 MG MG . 
E 2 NH2 B 1 14 14 NH2 NH2 . 
F 4 HOH A 1 16 16 HOH HOH . 
F 4 HOH A 2 22 22 HOH HOH . 
F 4 HOH A 3 23 23 HOH HOH . 
F 4 HOH A 4 24 24 HOH HOH . 
F 4 HOH A 5 25 25 HOH HOH . 
F 4 HOH A 6 27 27 HOH HOH . 
F 4 HOH A 7 30 30 HOH HOH . 
F 4 HOH A 8 34 34 HOH HOH . 
F 4 HOH A 9 35 35 HOH HOH . 
F 4 HOH A 10 40 40 HOH HOH . 
F 4 HOH A 11 41 41 HOH HOH . 
F 4 HOH A 12 42 42 HOH HOH . 
F 4 HOH A 13 44 44 HOH HOH . 
F 4 HOH A 14 45 45 HOH HOH . 
F 4 HOH A 15 46 46 HOH HOH . 
F 4 HOH A 16 47 47 HOH HOH . 
F 4 HOH A 17 48 48 HOH HOH . 
F 4 HOH A 18 53 53 HOH HOH . 
F 4 HOH A 19 54 54 HOH HOH . 
F 4 HOH A 20 55 55 HOH HOH . 
F 4 HOH A 21 57 57 HOH HOH . 
F 4 HOH A 22 58 58 HOH HOH . 
F 4 HOH A 23 59 59 HOH HOH . 
F 4 HOH A 24 61 61 HOH HOH . 
F 4 HOH A 25 62 62 HOH HOH . 
F 4 HOH A 26 65 65 HOH HOH . 
F 4 HOH A 27 66 66 HOH HOH . 
F 4 HOH A 28 67 67 HOH HOH . 
F 4 HOH A 29 68 68 HOH HOH . 
F 4 HOH A 30 70 70 HOH HOH . 
F 4 HOH A 31 71 71 HOH HOH . 
F 4 HOH A 32 72 72 HOH HOH . 
F 4 HOH A 33 73 73 HOH HOH . 
F 4 HOH A 34 75 75 HOH HOH . 
F 4 HOH A 35 77 77 HOH HOH . 
F 4 HOH A 36 81 81 HOH HOH . 
F 4 HOH A 37 83 83 HOH HOH . 
F 4 HOH A 38 84 84 HOH HOH . 
F 4 HOH A 39 86 86 HOH HOH . 
F 4 HOH A 40 89 89 HOH HOH . 
G 4 HOH B 1 15 15 HOH HOH . 
G 4 HOH B 2 16 16 HOH HOH . 
G 4 HOH B 3 17 17 HOH HOH . 
G 4 HOH B 4 18 18 HOH HOH . 
G 4 HOH B 5 19 19 HOH HOH . 
G 4 HOH B 6 20 20 HOH HOH . 
G 4 HOH B 7 21 21 HOH HOH . 
G 4 HOH B 8 26 26 HOH HOH . 
G 4 HOH B 9 28 28 HOH HOH . 
G 4 HOH B 10 29 29 HOH HOH . 
G 4 HOH B 11 31 31 HOH HOH . 
G 4 HOH B 12 32 32 HOH HOH . 
G 4 HOH B 13 33 33 HOH HOH . 
G 4 HOH B 14 36 36 HOH HOH . 
G 4 HOH B 15 37 37 HOH HOH . 
G 4 HOH B 16 38 38 HOH HOH . 
G 4 HOH B 17 39 39 HOH HOH . 
G 4 HOH B 18 43 43 HOH HOH . 
G 4 HOH B 19 49 49 HOH HOH . 
G 4 HOH B 20 50 50 HOH HOH . 
G 4 HOH B 21 51 51 HOH HOH . 
G 4 HOH B 22 52 52 HOH HOH . 
G 4 HOH B 23 56 56 HOH HOH . 
G 4 HOH B 24 60 60 HOH HOH . 
G 4 HOH B 25 63 63 HOH HOH . 
G 4 HOH B 26 64 64 HOH HOH . 
G 4 HOH B 27 69 69 HOH HOH . 
G 4 HOH B 28 74 74 HOH HOH . 
G 4 HOH B 29 76 76 HOH HOH . 
G 4 HOH B 30 78 78 HOH HOH . 
G 4 HOH B 31 79 79 HOH HOH . 
G 4 HOH B 32 80 80 HOH HOH . 
G 4 HOH B 33 82 82 HOH HOH . 
G 4 HOH B 34 85 85 HOH HOH . 
G 4 HOH B 35 87 87 HOH HOH . 
G 4 HOH B 36 88 88 HOH HOH . 
G 4 HOH B 37 90 90 HOH HOH . 
G 4 HOH B 38 91 91 HOH HOH . 
G 4 HOH B 39 92 92 HOH HOH . 
G 4 HOH B 40 93 93 HOH HOH . 
G 4 HOH B 41 94 94 HOH HOH . 
G 4 HOH B 42 95 95 HOH HOH . 
G 4 HOH B 43 96 96 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           N 
_atom_site.label_atom_id         N 
_atom_site.label_comp_id         NH2 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               15.888 
_atom_site.Cartn_y               15.284 
_atom_site.Cartn_z               22.72 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        11.56 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          N 
_atom_site.auth_comp_id          NH2 
_atom_site.auth_seq_id           7 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              50 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    1 
_model_server_stats.query_time_ms           237 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#