data_1W0X # _model_server_result.job_id UyyC5Tclgtz5yOBLFFi3wQ _model_server_result.datetime_utc '2024-12-22 06:01:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1w0x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1299}' # _entry.id 1W0X # _exptl.entry_id 1W0X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 298.343 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description OLOMOUCINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1W0X _cell.length_a 73.77 _cell.length_b 72.55 _cell.length_c 54.06 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1W0X _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C15 H18 N6 O' _chem_comp.formula_weight 298.343 _chem_comp.id OLO _chem_comp.mon_nstd_flag . _chem_comp.name OLOMOUCINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C OLO sing 237 n y N C7A OLO sing 238 n y N C3 OLO sing 239 n n C N1 OLO doub 240 n y C H OLO sing 241 n n N1 C3A OLO sing 242 n y C3A C7A OLO doub 243 n y C3A C1 OLO sing 244 n y C7A N3 OLO sing 245 n y C1 N2 OLO doub 246 n y C1 N5 OLO sing 247 n n N2 C2 OLO sing 248 n y C2 N3 OLO doub 249 n y C2 N4 OLO sing 250 n n C3 H31 OLO sing 251 n n C3 H32 OLO sing 252 n n C3 H33 OLO sing 253 n n N4 C4 OLO sing 254 n n N4 HN4 OLO sing 255 n n C4 C5 OLO sing 256 n n C4 H41 OLO sing 257 n n C4 H42 OLO sing 258 n n C5 O OLO sing 259 n n C5 H51 OLO sing 260 n n C5 H52 OLO sing 261 n n O HO OLO sing 262 n n N5 C6 OLO sing 263 n n N5 HN5 OLO sing 264 n n C6 C12 OLO sing 265 n n C6 H61 OLO sing 266 n n C6 H62 OLO sing 267 n n C7 C8 OLO doub 268 n y C7 C12 OLO sing 269 n y C7 H7 OLO sing 270 n n C8 C9 OLO sing 271 n y C8 H8 OLO sing 272 n n C9 C10 OLO doub 273 n y C9 H9 OLO sing 274 n n C10 C11 OLO sing 275 n y C10 H10 OLO sing 276 n n C11 C12 OLO doub 277 n y C11 H11 OLO sing 278 n n # _atom_sites.entry_id 1W0X _atom_sites.fract_transf_matrix[1][1] 0.013556 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013784 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018498 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OLO C 1 1299 1299 OLO OLO . C 3 HOH C 1 2001 2001 HOH HOH . C 3 HOH C 2 2002 2002 HOH HOH . C 3 HOH C 3 2003 2003 HOH HOH . C 3 HOH C 4 2004 2004 HOH HOH . C 3 HOH C 5 2005 2005 HOH HOH . C 3 HOH C 6 2006 2006 HOH HOH . C 3 HOH C 7 2007 2007 HOH HOH . C 3 HOH C 8 2008 2008 HOH HOH . C 3 HOH C 9 2009 2009 HOH HOH . C 3 HOH C 10 2010 2010 HOH HOH . C 3 HOH C 11 2011 2011 HOH HOH . C 3 HOH C 12 2012 2012 HOH HOH . C 3 HOH C 13 2013 2013 HOH HOH . C 3 HOH C 14 2014 2014 HOH HOH . C 3 HOH C 15 2015 2015 HOH HOH . C 3 HOH C 16 2016 2016 HOH HOH . C 3 HOH C 17 2017 2017 HOH HOH . C 3 HOH C 18 2018 2018 HOH HOH . C 3 HOH C 19 2019 2019 HOH HOH . C 3 HOH C 20 2020 2020 HOH HOH . C 3 HOH C 21 2021 2021 HOH HOH . C 3 HOH C 22 2022 2022 HOH HOH . C 3 HOH C 23 2023 2023 HOH HOH . C 3 HOH C 24 2024 2024 HOH HOH . C 3 HOH C 25 2025 2025 HOH HOH . C 3 HOH C 26 2026 2026 HOH HOH . C 3 HOH C 27 2027 2027 HOH HOH . C 3 HOH C 28 2028 2028 HOH HOH . C 3 HOH C 29 2029 2029 HOH HOH . C 3 HOH C 30 2030 2030 HOH HOH . C 3 HOH C 31 2031 2031 HOH HOH . C 3 HOH C 32 2032 2032 HOH HOH . C 3 HOH C 33 2033 2033 HOH HOH . C 3 HOH C 34 2034 2034 HOH HOH . C 3 HOH C 35 2035 2035 HOH HOH . C 3 HOH C 36 2036 2036 HOH HOH . C 3 HOH C 37 2037 2037 HOH HOH . C 3 HOH C 38 2038 2038 HOH HOH . C 3 HOH C 39 2039 2039 HOH HOH . C 3 HOH C 40 2040 2040 HOH HOH . C 3 HOH C 41 2041 2041 HOH HOH . C 3 HOH C 42 2042 2042 HOH HOH . C 3 HOH C 43 2043 2043 HOH HOH . C 3 HOH C 44 2044 2044 HOH HOH . C 3 HOH C 45 2045 2045 HOH HOH . C 3 HOH C 46 2046 2046 HOH HOH . C 3 HOH C 47 2047 2047 HOH HOH . C 3 HOH C 48 2048 2048 HOH HOH . C 3 HOH C 49 2049 2049 HOH HOH . C 3 HOH C 50 2050 2050 HOH HOH . C 3 HOH C 51 2051 2051 HOH HOH . C 3 HOH C 52 2052 2052 HOH HOH . C 3 HOH C 53 2053 2053 HOH HOH . C 3 HOH C 54 2054 2054 HOH HOH . C 3 HOH C 55 2055 2055 HOH HOH . C 3 HOH C 56 2056 2056 HOH HOH . C 3 HOH C 57 2057 2057 HOH HOH . C 3 HOH C 58 2058 2058 HOH HOH . C 3 HOH C 59 2059 2059 HOH HOH . C 3 HOH C 60 2060 2060 HOH HOH . C 3 HOH C 61 2061 2061 HOH HOH . C 3 HOH C 62 2062 2062 HOH HOH . C 3 HOH C 63 2063 2063 HOH HOH . C 3 HOH C 64 2064 2064 HOH HOH . C 3 HOH C 65 2065 2065 HOH HOH . C 3 HOH C 66 2066 2066 HOH HOH . C 3 HOH C 67 2067 2067 HOH HOH . C 3 HOH C 68 2068 2068 HOH HOH . C 3 HOH C 69 2069 2069 HOH HOH . C 3 HOH C 70 2070 2070 HOH HOH . C 3 HOH C 71 2071 2071 HOH HOH . C 3 HOH C 72 2072 2072 HOH HOH . C 3 HOH C 73 2073 2073 HOH HOH . C 3 HOH C 74 2074 2074 HOH HOH . C 3 HOH C 75 2075 2075 HOH HOH . C 3 HOH C 76 2076 2076 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N OLO . . . B 2 107.084 100.257 81.141 1 13.79 ? N OLO 1299 C 1 HETATM 2 C C OLO . . . B 2 108 100.948 80.336 1 12.67 ? C OLO 1299 C 1 HETATM 3 N N1 OLO . . . B 2 107.458 101.374 79.199 1 19.07 ? N1 OLO 1299 C 1 HETATM 4 C C3A OLO . . . B 2 106.135 100.911 79.246 1 19.05 ? C3A OLO 1299 C 1 HETATM 5 C C7A OLO . . . B 2 105.895 100.266 80.427 1 15.99 ? C7A OLO 1299 C 1 HETATM 6 C C1 OLO . . . B 2 105.044 100.968 78.358 1 20.61 ? C1 OLO 1299 C 1 HETATM 7 N N2 OLO . . . B 2 103.947 100.312 78.675 1 19.07 ? N2 OLO 1299 C 1 HETATM 8 C C2 OLO . . . B 2 103.707 99.752 79.865 1 23.05 ? C2 OLO 1299 C 1 HETATM 9 N N3 OLO . . . B 2 104.674 99.732 80.819 1 20.44 ? N3 OLO 1299 C 1 HETATM 10 C C3 OLO . . . B 2 107.303 99.574 82.49 1 16.07 ? C3 OLO 1299 C 1 HETATM 11 N N4 OLO . . . B 2 102.493 99.041 80.092 1 29.83 ? N4 OLO 1299 C 1 HETATM 12 C C4 OLO . . . B 2 101.588 98.714 78.912 1 35.83 ? C4 OLO 1299 C 1 HETATM 13 C C5 OLO . . . B 2 100.884 97.322 78.759 1 37.03 ? C5 OLO 1299 C 1 HETATM 14 O O OLO . . . B 2 99.461 97.601 78.724 1 42.53 ? O OLO 1299 C 1 HETATM 15 N N5 OLO . . . B 2 105.029 101.676 77.2 1 23.19 ? N5 OLO 1299 C 1 HETATM 16 C C6 OLO . . . B 2 104.008 101.35 76.18 1 21.98 ? C6 OLO 1299 C 1 HETATM 17 C C7 OLO . . . B 2 101.624 101.724 76.551 1 24.83 ? C7 OLO 1299 C 1 HETATM 18 C C8 OLO . . . B 2 100.46 102.547 76.507 1 24.27 ? C8 OLO 1299 C 1 HETATM 19 C C9 OLO . . . B 2 100.627 103.874 76.143 1 25.08 ? C9 OLO 1299 C 1 HETATM 20 C C10 OLO . . . B 2 101.952 104.368 75.839 1 20.96 ? C10 OLO 1299 C 1 HETATM 21 C C11 OLO . . . B 2 103.067 103.527 75.896 1 19.61 ? C11 OLO 1299 C 1 HETATM 22 C C12 OLO . . . B 2 102.889 102.243 76.234 1 20.17 ? C12 OLO 1299 C 1 HETATM 23 H HN4 OLO . . . B 2 102.198 98.738 81.008 1 0 ? HN4 OLO 1299 C 1 HETATM 24 H HO OLO . . . B 2 99.171 97.674 77.812 1 0 ? HO OLO 1299 C 1 HETATM 25 H HN5 OLO . . . B 2 105.682 102.418 76.997 1 0 ? HN5 OLO 1299 C 1 # _model_server_stats.io_time_ms 41 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 217 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 25 #