data_1W15 # _model_server_result.job_id 1laWRcQgJGMltoHND3eZAA _model_server_result.datetime_utc '2024-12-15 21:58:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1w15 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1002}' # _entry.id 1W15 # _exptl.entry_id 1W15 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1W15 _cell.length_a 91.49 _cell.length_b 91.49 _cell.length_c 122.142 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1W15 _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 63 2 2' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 45.745 79.232664 0 3 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 91.49 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 52 A ASP 324 1_555 B CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? metalc ? metalc2 A O GLU 93 A GLU 365 1_555 C CA CA . A CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? metalc ? metalc3 A OD2 ASP 106 A ASP 378 1_555 B CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.152 ? metalc ? metalc4 A OD1 ASP 106 A ASP 378 1_555 B CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.675 ? metalc ? metalc5 A O SER 107 A SER 379 1_555 B CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.666 ? metalc ? metalc6 A OE1 GLU 108 A GLU 380 1_555 B CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.583 ? metalc ? metalc7 A O GLU 108 A GLU 380 1_555 F NA NA . A NA 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc8 A O SER 111 A SER 383 1_555 F NA NA . A NA 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc9 A OD1 ASN 113 A ASN 385 1_555 F NA NA . A NA 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc10 A OE2 GLU 114 A GLU 386 8_556 D CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.996 ? metalc ? metalc11 A OD1 ASP 138 A ASP 410 11_655 C CA CA . A CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.537 ? metalc ? metalc12 A OD2 ASP 152 A ASP 424 1_555 D CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.3 ? metalc ? metalc13 A OD1 ASP 152 A ASP 424 1_555 D CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? metalc ? metalc14 A OXT GLY 153 A GLY 425 1_555 D CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? metalc ? metalc15 B CA CA . A CA 1001 1_555 P O HOH . A HOH 2049 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.748 ? metalc ? metalc16 C CA CA . A CA 1002 1_555 P O HOH . A HOH 2010 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc17 C CA CA . A CA 1002 1_555 P O HOH . A HOH 2042 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc18 C CA CA . A CA 1002 1_555 P O HOH . A HOH 2071 11_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.516 ? metalc ? metalc19 C CA CA . A CA 1002 1_555 P O HOH . A HOH 2072 11_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? metalc ? metalc20 C CA CA . A CA 1002 1_555 P O HOH . A HOH 2076 11_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? metalc ? metalc21 D CA CA . A CA 1003 1_555 P O HOH . A HOH 2062 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.907 ? metalc ? metalc22 D CA CA . A CA 1003 1_555 P O HOH . A HOH 2062 8_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? metalc ? metalc23 F NA NA . A NA 2002 1_555 P O HOH . A HOH 2050 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc24 F NA NA . A NA 2002 1_555 P O HOH . A HOH 2059 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1W15 _atom_sites.fract_transf_matrix[1][1] 0.01093 _atom_sites.fract_transf_matrix[1][2] 0.00631 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012621 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008187 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 1001 1001 CA CA . C 2 CA A 1 1002 1002 CA CA . D 2 CA A 1 1003 1003 CA CA . E 3 NA A 1 2001 2001 NA NA . F 3 NA A 1 2002 2002 NA NA . G 4 CL A 1 3001 3001 CL CL . H 4 CL A 1 3002 3002 CL CL . I 4 CL A 1 3003 3003 CL CL . J 4 CL A 1 3004 3004 CL CL . K 4 CL A 1 3005 3005 CL CL . L 4 CL A 1 3006 3006 CL CL . M 4 CL A 1 3007 3007 CL CL . N 4 CL A 1 3008 3008 CL CL . O 4 CL A 1 3009 3009 CL CL . P 5 HOH A 1 1999 1999 HOH HOH . P 5 HOH A 2 2000 2000 HOH HOH . P 5 HOH A 3 2003 2003 HOH HOH . P 5 HOH A 4 2004 2004 HOH HOH . P 5 HOH A 5 2005 2005 HOH HOH . P 5 HOH A 6 2006 2006 HOH HOH . P 5 HOH A 7 2007 2007 HOH HOH . P 5 HOH A 8 2008 2008 HOH HOH . P 5 HOH A 9 2009 2009 HOH HOH . P 5 HOH A 10 2010 2010 HOH HOH . P 5 HOH A 11 2011 2011 HOH HOH . P 5 HOH A 12 2012 2012 HOH HOH . P 5 HOH A 13 2013 2013 HOH HOH . P 5 HOH A 14 2014 2014 HOH HOH . P 5 HOH A 15 2015 2015 HOH HOH . P 5 HOH A 16 2016 2016 HOH HOH . P 5 HOH A 17 2017 2017 HOH HOH . P 5 HOH A 18 2018 2018 HOH HOH . P 5 HOH A 19 2019 2019 HOH HOH . P 5 HOH A 20 2020 2020 HOH HOH . P 5 HOH A 21 2021 2021 HOH HOH . P 5 HOH A 22 2022 2022 HOH HOH . P 5 HOH A 23 2023 2023 HOH HOH . P 5 HOH A 24 2024 2024 HOH HOH . P 5 HOH A 25 2025 2025 HOH HOH . P 5 HOH A 26 2026 2026 HOH HOH . P 5 HOH A 27 2027 2027 HOH HOH . P 5 HOH A 28 2028 2028 HOH HOH . P 5 HOH A 29 2029 2029 HOH HOH . P 5 HOH A 30 2030 2030 HOH HOH . P 5 HOH A 31 2031 2031 HOH HOH . P 5 HOH A 32 2032 2032 HOH HOH . P 5 HOH A 33 2033 2033 HOH HOH . P 5 HOH A 34 2034 2034 HOH HOH . P 5 HOH A 35 2035 2035 HOH HOH . P 5 HOH A 36 2036 2036 HOH HOH . P 5 HOH A 37 2037 2037 HOH HOH . P 5 HOH A 38 2038 2038 HOH HOH . P 5 HOH A 39 2039 2039 HOH HOH . P 5 HOH A 40 2040 2040 HOH HOH . P 5 HOH A 41 2041 2041 HOH HOH . P 5 HOH A 42 2042 2042 HOH HOH . P 5 HOH A 43 2043 2043 HOH HOH . P 5 HOH A 44 2044 2044 HOH HOH . P 5 HOH A 45 2045 2045 HOH HOH . P 5 HOH A 46 2046 2046 HOH HOH . P 5 HOH A 47 2047 2047 HOH HOH . P 5 HOH A 48 2048 2048 HOH HOH . P 5 HOH A 49 2049 2049 HOH HOH . P 5 HOH A 50 2050 2050 HOH HOH . P 5 HOH A 51 2051 2051 HOH HOH . P 5 HOH A 52 2052 2052 HOH HOH . P 5 HOH A 53 2053 2053 HOH HOH . P 5 HOH A 54 2054 2054 HOH HOH . P 5 HOH A 55 2055 2055 HOH HOH . P 5 HOH A 56 2056 2056 HOH HOH . P 5 HOH A 57 2057 2057 HOH HOH . P 5 HOH A 58 2058 2058 HOH HOH . P 5 HOH A 59 2059 2059 HOH HOH . P 5 HOH A 60 2060 2060 HOH HOH . P 5 HOH A 61 2061 2061 HOH HOH . P 5 HOH A 62 2062 2062 HOH HOH . P 5 HOH A 63 2063 2063 HOH HOH . P 5 HOH A 64 2064 2064 HOH HOH . P 5 HOH A 65 2065 2065 HOH HOH . P 5 HOH A 66 2066 2066 HOH HOH . P 5 HOH A 67 2067 2067 HOH HOH . P 5 HOH A 68 2068 2068 HOH HOH . P 5 HOH A 69 2069 2069 HOH HOH . P 5 HOH A 70 2070 2070 HOH HOH . P 5 HOH A 71 2071 2071 HOH HOH . P 5 HOH A 72 2072 2072 HOH HOH . P 5 HOH A 73 2073 2073 HOH HOH . P 5 HOH A 74 2074 2074 HOH HOH . P 5 HOH A 75 2075 2075 HOH HOH . P 5 HOH A 76 2076 2076 HOH HOH . P 5 HOH A 77 2077 2077 HOH HOH . P 5 HOH A 78 2078 2078 HOH HOH . P 5 HOH A 79 2079 2079 HOH HOH . P 5 HOH A 80 2080 2080 HOH HOH . P 5 HOH A 81 2081 2081 HOH HOH . P 5 HOH A 82 2082 2082 HOH HOH . P 5 HOH A 83 2083 2083 HOH HOH . P 5 HOH A 84 2084 2084 HOH HOH . P 5 HOH A 85 2085 2085 HOH HOH . P 5 HOH A 86 2086 2086 HOH HOH . P 5 HOH A 87 2087 2087 HOH HOH . P 5 HOH A 88 2088 2088 HOH HOH . P 5 HOH A 89 2089 2089 HOH HOH . P 5 HOH A 90 2090 2090 HOH HOH . P 5 HOH A 91 2091 2091 HOH HOH . P 5 HOH A 92 2092 2092 HOH HOH . P 5 HOH A 93 2093 2093 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 51.651 _atom_site.Cartn_y 11.099 _atom_site.Cartn_z 30.675 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 48.47 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 1002 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 348 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #