data_1W1J
#
_model_server_result.job_id            oIaLu982ELcg5IvzFlcTcw 
_model_server_result.datetime_utc      '2024-11-24 12:13:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1w1j 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":1561}' 
#
_entry.id    1W1J 
#
_exptl.entry_id    1W1J 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1W1J 
_cell.length_a            129.519 
_cell.length_b            129.519 
_cell.length_c            133.28 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1W1J 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        79 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'I 4' 
#
_pdbx_struct_assembly.method_details        PQS 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NE2 HIS 422 A HIS 422 1_555 C C8M FAD . A FAD 1561 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.496 ? 
covale ? covale2 B NE2 HIS 422 B HIS 422 1_555 E C8M FAD . B FAD 1561 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.505 ? 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 107 n n 
PA O2A FAD sing 108 n n 
PA O5B FAD sing 109 n n 
PA O3P FAD sing 110 n n 
O2A HOA2 FAD sing 111 n n 
O5B C5B FAD sing 112 n n 
C5B C4B FAD sing 113 n n 
C5B H51A FAD sing 114 n n 
C5B H52A FAD sing 115 n n 
C4B O4B FAD sing 116 n n 
C4B C3B FAD sing 117 n n 
C4B H4B FAD sing 118 n n 
O4B C1B FAD sing 119 n n 
C3B O3B FAD sing 120 n n 
C3B C2B FAD sing 121 n n 
C3B H3B FAD sing 122 n n 
O3B HO3A FAD sing 123 n n 
C2B O2B FAD sing 124 n n 
C2B C1B FAD sing 125 n n 
C2B H2B FAD sing 126 n n 
O2B HO2A FAD sing 127 n n 
C1B N9A FAD sing 128 n n 
C1B H1B FAD sing 129 n n 
N9A C8A FAD sing 130 n y 
N9A C4A FAD sing 131 n y 
C8A N7A FAD doub 132 n y 
C8A H8A FAD sing 133 n n 
N7A C5A FAD sing 134 n y 
C5A C6A FAD sing 135 n y 
C5A C4A FAD doub 136 n y 
C6A N6A FAD sing 137 n n 
C6A N1A FAD doub 138 n y 
N6A H61A FAD sing 139 n n 
N6A H62A FAD sing 140 n n 
N1A C2A FAD sing 141 n y 
C2A N3A FAD doub 142 n y 
C2A H2A FAD sing 143 n n 
N3A C4A FAD sing 144 n y 
N1 C2 FAD sing 145 n n 
N1 C10 FAD doub 146 n n 
C2 O2 FAD doub 147 n n 
C2 N3 FAD sing 148 n n 
N3 C4 FAD sing 149 n n 
N3 HN3 FAD sing 150 n n 
C4 O4 FAD doub 151 n n 
C4 C4X FAD sing 152 n n 
C4X N5 FAD doub 153 n n 
C4X C10 FAD sing 154 n n 
N5 C5X FAD sing 155 n n 
C5X C6 FAD doub 156 n y 
C5X C9A FAD sing 157 n y 
C6 C7 FAD sing 158 n y 
C6 H6 FAD sing 159 n n 
C7 C7M FAD sing 160 n n 
C7 C8 FAD doub 161 n y 
C7M HM71 FAD sing 162 n n 
C7M HM72 FAD sing 163 n n 
C7M HM73 FAD sing 164 n n 
C8 C8M FAD sing 165 n n 
C8 C9 FAD sing 166 n y 
C8M HM81 FAD sing 167 n n 
C8M HM82 FAD sing 168 n n 
C8M HM83 FAD sing 169 n n 
C9 C9A FAD doub 170 n y 
C9 H9 FAD sing 171 n n 
C9A N10 FAD sing 172 n n 
N10 C10 FAD sing 173 n n 
N10 C1' FAD sing 174 n n 
C1' C2' FAD sing 175 n n 
C1' "H1'1" FAD sing 176 n n 
C1' "H1'2" FAD sing 177 n n 
C2' O2' FAD sing 178 n n 
C2' C3' FAD sing 179 n n 
C2' H2' FAD sing 180 n n 
O2' HO2' FAD sing 181 n n 
C3' O3' FAD sing 182 n n 
C3' C4' FAD sing 183 n n 
C3' H3' FAD sing 184 n n 
O3' HO3' FAD sing 185 n n 
C4' O4' FAD sing 186 n n 
C4' C5' FAD sing 187 n n 
C4' H4' FAD sing 188 n n 
O4' HO4' FAD sing 189 n n 
C5' O5' FAD sing 190 n n 
C5' "H5'1" FAD sing 191 n n 
C5' "H5'2" FAD sing 192 n n 
O5' P FAD sing 193 n n 
P O1P FAD doub 194 n n 
P O2P FAD sing 195 n n 
P O3P FAD sing 196 n n 
O2P HOP2 FAD sing 197 n n 
#
_atom_sites.entry_id                     1W1J 
_atom_sites.fract_transf_matrix[1][1]    0.007721 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007721 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007503 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FAD A 1 1561 1561 FAD FAD . 
D 3 EUG A 1 1562 1562 EUG EUG . 
E 2 FAD B 1 1561 1561 FAD FAD . 
F 3 EUG B 1 1562 1562 EUG EUG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . E 2 89.672 37.167 36.456 1 68.98 ? PA FAD 1561 B 1 
HETATM 2 O O1A FAD . . . E 2 89.154 36.414 35.324 1 70.56 ? O1A FAD 1561 B 1 
HETATM 3 O O2A FAD . . . E 2 90.105 38.595 36.115 1 69.49 ? O2A FAD 1561 B 1 
HETATM 4 O O5B FAD . . . E 2 88.466 37.19 37.505 1 73.73 ? O5B FAD 1561 B 1 
HETATM 5 C C5B FAD . . . E 2 88.7 36.953 38.872 1 74.71 ? C5B FAD 1561 B 1 
HETATM 6 C C4B FAD . . . E 2 87.745 37.732 39.78 1 75.79 ? C4B FAD 1561 B 1 
HETATM 7 O O4B FAD . . . E 2 88.505 38.729 40.425 1 76.69 ? O4B FAD 1561 B 1 
HETATM 8 C C3B FAD . . . E 2 86.548 38.417 39.133 1 75.89 ? C3B FAD 1561 B 1 
HETATM 9 O O3B FAD . . . E 2 85.356 37.775 39.535 1 76.36 ? O3B FAD 1561 B 1 
HETATM 10 C C2B FAD . . . E 2 86.58 39.847 39.652 1 76.26 ? C2B FAD 1561 B 1 
HETATM 11 O O2B FAD . . . E 2 85.525 40.067 40.553 1 76.4 ? O2B FAD 1561 B 1 
HETATM 12 C C1B FAD . . . E 2 87.873 39.992 40.429 1 76.75 ? C1B FAD 1561 B 1 
HETATM 13 N N9A FAD . . . E 2 88.808 40.992 39.865 1 77.22 ? N9A FAD 1561 B 1 
HETATM 14 C C8A FAD . . . E 2 89.8 40.745 38.942 1 77.4 ? C8A FAD 1561 B 1 
HETATM 15 N N7A FAD . . . E 2 90.447 41.9 38.69 1 77.33 ? N7A FAD 1561 B 1 
HETATM 16 C C5A FAD . . . E 2 89.893 42.875 39.437 1 76.63 ? C5A FAD 1561 B 1 
HETATM 17 C C6A FAD . . . E 2 90.188 44.222 39.556 1 76.6 ? C6A FAD 1561 B 1 
HETATM 18 N N6A FAD . . . E 2 91.42 44.611 39.259 1 77.5 ? N6A FAD 1561 B 1 
HETATM 19 N N1A FAD . . . E 2 89.446 44.997 40.421 1 76.32 ? N1A FAD 1561 B 1 
HETATM 20 C C2A FAD . . . E 2 88.426 44.434 41.159 1 76.75 ? C2A FAD 1561 B 1 
HETATM 21 N N3A FAD . . . E 2 88.141 43.085 41.033 1 76.69 ? N3A FAD 1561 B 1 
HETATM 22 C C4A FAD . . . E 2 88.868 42.32 40.188 1 76.6 ? C4A FAD 1561 B 1 
HETATM 23 N N1 FAD . . . E 2 93.047 28.834 40.421 1 77.53 ? N1 FAD 1561 B 1 
HETATM 24 C C2 FAD . . . E 2 94.058 28.898 41.358 1 77.39 ? C2 FAD 1561 B 1 
HETATM 25 O O2 FAD . . . E 2 94.107 29.847 42.128 1 76.06 ? O2 FAD 1561 B 1 
HETATM 26 N N3 FAD . . . E 2 95.014 27.894 41.427 1 78.42 ? N3 FAD 1561 B 1 
HETATM 27 C C4 FAD . . . E 2 94.961 26.821 40.555 1 78.21 ? C4 FAD 1561 B 1 
HETATM 28 O O4 FAD . . . E 2 95.808 25.939 40.626 1 76.54 ? O4 FAD 1561 B 1 
HETATM 29 C C4X FAD . . . E 2 93.941 26.76 39.607 1 79.23 ? C4X FAD 1561 B 1 
HETATM 30 N N5 FAD . . . E 2 93.869 25.689 38.747 1 80.19 ? N5 FAD 1561 B 1 
HETATM 31 C C5X FAD . . . E 2 92.926 25.682 37.749 1 80.65 ? C5X FAD 1561 B 1 
HETATM 32 C C6 FAD . . . E 2 92.938 24.655 36.802 1 81.73 ? C6 FAD 1561 B 1 
HETATM 33 C C7 FAD . . . E 2 92.011 24.625 35.752 1 81.2 ? C7 FAD 1561 B 1 
HETATM 34 C C7M FAD . . . E 2 92.221 23.628 34.647 1 81.02 ? C7M FAD 1561 B 1 
HETATM 35 C C8 FAD . . . E 2 91.056 25.649 35.657 1 80.46 ? C8 FAD 1561 B 1 
HETATM 36 C C8M FAD . . . E 2 89.95 25.638 34.634 1 77.93 ? C8M FAD 1561 B 1 
HETATM 37 C C9 FAD . . . E 2 91.06 26.667 36.615 1 80.69 ? C9 FAD 1561 B 1 
HETATM 38 C C9A FAD . . . E 2 91.983 26.707 37.669 1 80.1 ? C9A FAD 1561 B 1 
HETATM 39 N N10 FAD . . . E 2 91.982 27.733 38.617 1 78.8 ? N10 FAD 1561 B 1 
HETATM 40 C C10 FAD . . . E 2 92.92 27.717 39.621 1 78.75 ? C10 FAD 1561 B 1 
HETATM 41 C C1' FAD . . . E 2 90.941 28.822 38.637 1 77.95 ? C1' FAD 1561 B 1 
HETATM 42 C C2' FAD . . . E 2 91.241 29.995 37.692 1 77.36 ? C2' FAD 1561 B 1 
HETATM 43 O O2' FAD . . . E 2 91.302 29.566 36.352 1 77.94 ? O2' FAD 1561 B 1 
HETATM 44 C C3' FAD . . . E 2 92.518 30.741 38.06 1 75.81 ? C3' FAD 1561 B 1 
HETATM 45 O O3' FAD . . . E 2 92.418 31.019 39.432 1 76.28 ? O3' FAD 1561 B 1 
HETATM 46 C C4' FAD . . . E 2 92.732 32.039 37.277 1 74.94 ? C4' FAD 1561 B 1 
HETATM 47 O O4' FAD . . . E 2 94.036 32.541 37.512 1 74.81 ? O4' FAD 1561 B 1 
HETATM 48 C C5' FAD . . . E 2 91.716 33.122 37.634 1 73.37 ? C5' FAD 1561 B 1 
HETATM 49 O O5' FAD . . . E 2 91.398 33.871 36.487 1 71.52 ? O5' FAD 1561 B 1 
HETATM 50 P P FAD . . . E 2 91.899 35.389 36.266 1 70.9 ? P FAD 1561 B 1 
HETATM 51 O O1P FAD . . . E 2 93.232 35.587 36.865 1 69.9 ? O1P FAD 1561 B 1 
HETATM 52 O O2P FAD . . . E 2 91.911 35.675 34.75 1 71.1 ? O2P FAD 1561 B 1 
HETATM 53 O O3P FAD . . . E 2 90.865 36.315 37.1 1 70.64 ? O3P FAD 1561 B 1 
#
_model_server_stats.io_time_ms              60 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    30 
_model_server_stats.query_time_ms           311 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           53 
#