data_1W1L # _model_server_result.job_id SFNCwZHqZTPmoBJYCJhaDw _model_server_result.datetime_utc '2024-10-18 00:27:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1w1l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":600}' # _entry.id 1W1L # _exptl.entry_id 1W1L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1W1L _cell.length_a 129.9 _cell.length_b 129.9 _cell.length_c 133.608 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1W1L _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NE2 HIS 422 A HIS 422 1_555 C C8M FAD . A FAD 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.502 ? covale ? covale2 B NE2 HIS 422 B HIS 422 1_555 E C8M FAD . B FAD 1561 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.515 ? # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 107 n n PA O2A FAD sing 108 n n PA O5B FAD sing 109 n n PA O3P FAD sing 110 n n O2A HOA2 FAD sing 111 n n O5B C5B FAD sing 112 n n C5B C4B FAD sing 113 n n C5B H51A FAD sing 114 n n C5B H52A FAD sing 115 n n C4B O4B FAD sing 116 n n C4B C3B FAD sing 117 n n C4B H4B FAD sing 118 n n O4B C1B FAD sing 119 n n C3B O3B FAD sing 120 n n C3B C2B FAD sing 121 n n C3B H3B FAD sing 122 n n O3B HO3A FAD sing 123 n n C2B O2B FAD sing 124 n n C2B C1B FAD sing 125 n n C2B H2B FAD sing 126 n n O2B HO2A FAD sing 127 n n C1B N9A FAD sing 128 n n C1B H1B FAD sing 129 n n N9A C8A FAD sing 130 n y N9A C4A FAD sing 131 n y C8A N7A FAD doub 132 n y C8A H8A FAD sing 133 n n N7A C5A FAD sing 134 n y C5A C6A FAD sing 135 n y C5A C4A FAD doub 136 n y C6A N6A FAD sing 137 n n C6A N1A FAD doub 138 n y N6A H61A FAD sing 139 n n N6A H62A FAD sing 140 n n N1A C2A FAD sing 141 n y C2A N3A FAD doub 142 n y C2A H2A FAD sing 143 n n N3A C4A FAD sing 144 n y N1 C2 FAD sing 145 n n N1 C10 FAD doub 146 n n C2 O2 FAD doub 147 n n C2 N3 FAD sing 148 n n N3 C4 FAD sing 149 n n N3 HN3 FAD sing 150 n n C4 O4 FAD doub 151 n n C4 C4X FAD sing 152 n n C4X N5 FAD doub 153 n n C4X C10 FAD sing 154 n n N5 C5X FAD sing 155 n n C5X C6 FAD doub 156 n y C5X C9A FAD sing 157 n y C6 C7 FAD sing 158 n y C6 H6 FAD sing 159 n n C7 C7M FAD sing 160 n n C7 C8 FAD doub 161 n y C7M HM71 FAD sing 162 n n C7M HM72 FAD sing 163 n n C7M HM73 FAD sing 164 n n C8 C8M FAD sing 165 n n C8 C9 FAD sing 166 n y C8M HM81 FAD sing 167 n n C8M HM82 FAD sing 168 n n C8M HM83 FAD sing 169 n n C9 C9A FAD doub 170 n y C9 H9 FAD sing 171 n n C9A N10 FAD sing 172 n n N10 C10 FAD sing 173 n n N10 C1' FAD sing 174 n n C1' C2' FAD sing 175 n n C1' "H1'1" FAD sing 176 n n C1' "H1'2" FAD sing 177 n n C2' O2' FAD sing 178 n n C2' C3' FAD sing 179 n n C2' H2' FAD sing 180 n n O2' HO2' FAD sing 181 n n C3' O3' FAD sing 182 n n C3' C4' FAD sing 183 n n C3' H3' FAD sing 184 n n O3' HO3' FAD sing 185 n n C4' O4' FAD sing 186 n n C4' C5' FAD sing 187 n n C4' H4' FAD sing 188 n n O4' HO4' FAD sing 189 n n C5' O5' FAD sing 190 n n C5' "H5'1" FAD sing 191 n n C5' "H5'2" FAD sing 192 n n O5' P FAD sing 193 n n P O1P FAD doub 194 n n P O2P FAD sing 195 n n P O3P FAD sing 196 n n O2P HOP2 FAD sing 197 n n # _atom_sites.entry_id 1W1L _atom_sites.fract_transf_matrix[1][1] 0.007698 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007698 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007484 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 600 600 FAD FAD . D 3 EUG A 1 1562 1562 EUG EUG . E 2 FAD B 1 1561 1561 FAD FAD . F 3 EUG B 1 1562 1562 EUG EUG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . C 2 97.574 47.109 75.781 1 51.21 ? PA FAD 600 A 1 HETATM 2 O O1A FAD . . . C 2 98.413 47.997 76.639 1 52.71 ? O1A FAD 600 A 1 HETATM 3 O O2A FAD . . . C 2 96.582 46.246 76.586 1 51.38 ? O2A FAD 600 A 1 HETATM 4 O O5B FAD . . . C 2 97.07 47.91 74.55 1 61.05 ? O5B FAD 600 A 1 HETATM 5 C C5B FAD . . . C 2 97.676 48.319 73.057 1 61.05 ? C5B FAD 600 A 1 HETATM 6 C C4B FAD . . . C 2 96.516 48.808 72.232 1 61.88 ? C4B FAD 600 A 1 HETATM 7 O O4B FAD . . . C 2 95.843 47.683 71.732 1 61.78 ? O4B FAD 600 A 1 HETATM 8 C C3B FAD . . . C 2 95.442 49.578 72.998 1 62.02 ? C3B FAD 600 A 1 HETATM 9 O O3B FAD . . . C 2 95.783 50.904 73.352 1 60.62 ? O3B FAD 600 A 1 HETATM 10 C C2B FAD . . . C 2 94.291 49.459 72.016 1 62.17 ? C2B FAD 600 A 1 HETATM 11 O O2B FAD . . . C 2 94.396 50.418 70.976 1 60.7 ? O2B FAD 600 A 1 HETATM 12 C C1B FAD . . . C 2 94.502 48.056 71.459 1 62.65 ? C1B FAD 600 A 1 HETATM 13 N N9A FAD . . . C 2 93.603 47.072 72.101 1 63.54 ? N9A FAD 600 A 1 HETATM 14 C C8A FAD . . . C 2 93.92 46.243 73.147 1 63.52 ? C8A FAD 600 A 1 HETATM 15 N N7A FAD . . . C 2 92.845 45.487 73.453 1 63.84 ? N7A FAD 600 A 1 HETATM 16 C C5A FAD . . . C 2 91.845 45.815 72.612 1 63.9 ? C5A FAD 600 A 1 HETATM 17 C C6A FAD . . . C 2 90.56 45.337 72.498 1 63.63 ? C6A FAD 600 A 1 HETATM 18 N N6A FAD . . . C 2 90.41 44.057 72.789 1 65 ? N6A FAD 600 A 1 HETATM 19 N N1A FAD . . . C 2 89.726 45.876 71.541 1 64.24 ? N1A FAD 600 A 1 HETATM 20 C C2A FAD . . . C 2 90.172 46.869 70.693 1 65.36 ? C2A FAD 600 A 1 HETATM 21 N N3A FAD . . . C 2 91.471 47.335 70.806 1 65.01 ? N3A FAD 600 A 1 HETATM 22 C C4A FAD . . . C 2 92.298 46.808 71.752 1 64.55 ? C4A FAD 600 A 1 HETATM 23 N N1 FAD . . . C 2 106.366 46.058 71.751 1 54.77 ? N1 FAD 600 A 1 HETATM 24 C C2 FAD . . . C 2 106.554 45.12 70.742 1 55.47 ? C2 FAD 600 A 1 HETATM 25 O O2 FAD . . . C 2 105.698 44.923 69.88 1 55.38 ? O2 FAD 600 A 1 HETATM 26 N N3 FAD . . . C 2 107.733 44.385 70.696 1 55.46 ? N3 FAD 600 A 1 HETATM 27 C C4 FAD . . . C 2 108.729 44.566 71.633 1 53.26 ? C4 FAD 600 A 1 HETATM 28 O O4 FAD . . . C 2 109.407 43.591 71.856 1 52.89 ? O4 FAD 600 A 1 HETATM 29 C C4X FAD . . . C 2 108.555 45.507 72.639 1 54.06 ? C4X FAD 600 A 1 HETATM 30 N N5 FAD . . . C 2 109.549 45.702 73.572 1 54.25 ? N5 FAD 600 A 1 HETATM 31 C C5X FAD . . . C 2 109.385 46.631 74.571 1 54.22 ? C5X FAD 600 A 1 HETATM 32 C C6 FAD . . . C 2 110.381 46.845 75.521 1 54.52 ? C6 FAD 600 A 1 HETATM 33 C C7 FAD . . . C 2 110.234 47.781 76.563 1 54.62 ? C7 FAD 600 A 1 HETATM 34 C C7M FAD . . . C 2 111.225 47.741 77.708 1 53.66 ? C7M FAD 600 A 1 HETATM 35 C C8 FAD . . . C 2 109.043 48.536 76.629 1 53.75 ? C8 FAD 600 A 1 HETATM 36 C C8M FAD . . . C 2 108.654 49.45 77.756 1 48.31 ? C8M FAD 600 A 1 HETATM 37 C C9 FAD . . . C 2 108.066 48.31 75.661 1 55.97 ? C9 FAD 600 A 1 HETATM 38 C C9A FAD . . . C 2 108.209 47.369 74.632 1 55.49 ? C9A FAD 600 A 1 HETATM 39 N N10 FAD . . . C 2 107.191 47.184 73.695 1 54.87 ? N10 FAD 600 A 1 HETATM 40 C C10 FAD . . . C 2 107.367 46.254 72.695 1 54.98 ? C10 FAD 600 A 1 HETATM 41 C C1' FAD . . . C 2 105.872 47.891 73.826 1 54.6 ? C1' FAD 600 A 1 HETATM 42 C C2' FAD . . . C 2 104.902 47.173 74.776 1 55.39 ? C2' FAD 600 A 1 HETATM 43 O O2' FAD . . . C 2 105.504 46.899 76.034 1 54.39 ? O2' FAD 600 A 1 HETATM 44 C C3' FAD . . . C 2 104.344 45.874 74.191 1 55.37 ? C3' FAD 600 A 1 HETATM 45 O O3' FAD . . . C 2 104.066 45.974 72.818 1 56.53 ? O3' FAD 600 A 1 HETATM 46 C C4' FAD . . . C 2 103.064 45.452 74.864 1 54.78 ? C4' FAD 600 A 1 HETATM 47 O O4' FAD . . . C 2 102.698 44.197 74.356 1 57.72 ? O4' FAD 600 A 1 HETATM 48 C C5' FAD . . . C 2 101.924 46.374 74.52 1 53.77 ? C5' FAD 600 A 1 HETATM 49 O O5' FAD . . . C 2 101.067 46.357 75.63 1 52.08 ? O5' FAD 600 A 1 HETATM 50 P P FAD . . . C 2 99.792 45.407 75.741 1 49.09 ? P FAD 600 A 1 HETATM 51 O O1P FAD . . . C 2 99.986 44.132 75.034 1 51.97 ? O1P FAD 600 A 1 HETATM 52 O O2P FAD . . . C 2 99.472 45.188 77.214 1 51.56 ? O2P FAD 600 A 1 HETATM 53 O O3P FAD . . . C 2 98.607 46.172 75.007 1 51.46 ? O3P FAD 600 A 1 # _model_server_stats.io_time_ms 73 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 53 #