data_1W6N # _model_server_result.job_id 0Q-GPpRK_B-PkrDeWvuufw _model_server_result.datetime_utc '2024-11-22 15:16:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1w6n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":3136}' # _entry.id 1W6N # _exptl.entry_id 1W6N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-MERCAPTOETHANOL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1W6N _cell.length_a 36.809 _cell.length_b 88.263 _cell.length_c 93.648 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1W6N _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 15 A GLU 1015 1_555 A N CSO 16 A CSO 1016 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C CSO 16 A CSO 1016 1_555 A N LEU 17 A LEU 1017 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 A SG CYS 88 A CYS 1088 1_555 D S2 BME . A BME 2136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? covale ? covale4 A SG CYS 130 A CYS 1130 1_555 E S2 BME . A BME 2137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id BME _chem_comp.mon_nstd_flag . _chem_comp.name BETA-MERCAPTOETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BME sing 70 n n C1 O1 BME sing 71 n n C1 H11 BME sing 72 n n C1 H12 BME sing 73 n n C2 S2 BME sing 74 n n C2 H21 BME sing 75 n n C2 H22 BME sing 76 n n O1 HO1 BME sing 77 n n S2 HS2 BME sing 78 n n # _atom_sites.entry_id 1W6N _atom_sites.fract_transf_matrix[1][1] 0.027167 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01133 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010678 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 2135 2135 SO4 SO4 . D 4 BME A 1 2136 2136 BME BME . E 4 BME A 1 2137 2137 BME BME . F 4 BME B 1 3135 3135 BME BME . G 4 BME B 1 3136 3136 BME BME . H 4 BME B 1 3137 3137 BME BME . I 5 HOH A 1 2001 2001 HOH HOH . I 5 HOH A 2 2002 2002 HOH HOH . I 5 HOH A 3 2003 2003 HOH HOH . I 5 HOH A 4 2004 2004 HOH HOH . I 5 HOH A 5 2005 2005 HOH HOH . I 5 HOH A 6 2006 2006 HOH HOH . I 5 HOH A 7 2007 2007 HOH HOH . I 5 HOH A 8 2008 2008 HOH HOH . I 5 HOH A 9 2009 2009 HOH HOH . I 5 HOH A 10 2010 2010 HOH HOH . I 5 HOH A 11 2011 2011 HOH HOH . I 5 HOH A 12 2012 2012 HOH HOH . I 5 HOH A 13 2013 2013 HOH HOH . I 5 HOH A 14 2014 2014 HOH HOH . I 5 HOH A 15 2015 2015 HOH HOH . I 5 HOH A 16 2016 2016 HOH HOH . I 5 HOH A 17 2017 2017 HOH HOH . I 5 HOH A 18 2018 2018 HOH HOH . I 5 HOH A 19 2019 2019 HOH HOH . I 5 HOH A 20 2020 2020 HOH HOH . I 5 HOH A 21 2021 2021 HOH HOH . I 5 HOH A 22 2022 2022 HOH HOH . I 5 HOH A 23 2023 2023 HOH HOH . I 5 HOH A 24 2024 2024 HOH HOH . I 5 HOH A 25 2025 2025 HOH HOH . I 5 HOH A 26 2026 2026 HOH HOH . I 5 HOH A 27 2027 2027 HOH HOH . I 5 HOH A 28 2028 2028 HOH HOH . I 5 HOH A 29 2029 2029 HOH HOH . I 5 HOH A 30 2030 2030 HOH HOH . I 5 HOH A 31 2031 2031 HOH HOH . I 5 HOH A 32 2032 2032 HOH HOH . I 5 HOH A 33 2033 2033 HOH HOH . I 5 HOH A 34 2034 2034 HOH HOH . I 5 HOH A 35 2035 2035 HOH HOH . I 5 HOH A 36 2036 2036 HOH HOH . I 5 HOH A 37 2037 2037 HOH HOH . I 5 HOH A 38 2038 2038 HOH HOH . I 5 HOH A 39 2039 2039 HOH HOH . I 5 HOH A 40 2040 2040 HOH HOH . I 5 HOH A 41 2041 2041 HOH HOH . I 5 HOH A 42 2042 2042 HOH HOH . I 5 HOH A 43 2043 2043 HOH HOH . I 5 HOH A 44 2044 2044 HOH HOH . I 5 HOH A 45 2045 2045 HOH HOH . I 5 HOH A 46 2046 2046 HOH HOH . I 5 HOH A 47 2047 2047 HOH HOH . I 5 HOH A 48 2048 2048 HOH HOH . I 5 HOH A 49 2049 2049 HOH HOH . I 5 HOH A 50 2050 2050 HOH HOH . I 5 HOH A 51 2051 2051 HOH HOH . I 5 HOH A 52 2052 2052 HOH HOH . I 5 HOH A 53 2053 2053 HOH HOH . I 5 HOH A 54 2054 2054 HOH HOH . I 5 HOH A 55 2055 2055 HOH HOH . I 5 HOH A 56 2056 2056 HOH HOH . I 5 HOH A 57 2057 2057 HOH HOH . I 5 HOH A 58 2058 2058 HOH HOH . I 5 HOH A 59 2059 2059 HOH HOH . I 5 HOH A 60 2060 2060 HOH HOH . I 5 HOH A 61 2061 2061 HOH HOH . I 5 HOH A 62 2062 2062 HOH HOH . I 5 HOH A 63 2063 2063 HOH HOH . I 5 HOH A 64 2064 2064 HOH HOH . I 5 HOH A 65 2065 2065 HOH HOH . I 5 HOH A 66 2066 2066 HOH HOH . I 5 HOH A 67 2067 2067 HOH HOH . I 5 HOH A 68 2068 2068 HOH HOH . I 5 HOH A 69 2069 2069 HOH HOH . I 5 HOH A 70 2070 2070 HOH HOH . I 5 HOH A 71 2071 2071 HOH HOH . I 5 HOH A 72 2072 2072 HOH HOH . I 5 HOH A 73 2073 2073 HOH HOH . I 5 HOH A 74 2074 2074 HOH HOH . I 5 HOH A 75 2075 2075 HOH HOH . I 5 HOH A 76 2076 2076 HOH HOH . I 5 HOH A 77 2077 2077 HOH HOH . I 5 HOH A 78 2078 2078 HOH HOH . I 5 HOH A 79 2079 2079 HOH HOH . I 5 HOH A 80 2080 2080 HOH HOH . I 5 HOH A 81 2081 2081 HOH HOH . I 5 HOH A 82 2082 2082 HOH HOH . I 5 HOH A 83 2083 2083 HOH HOH . I 5 HOH A 84 2084 2084 HOH HOH . I 5 HOH A 85 2085 2085 HOH HOH . I 5 HOH A 86 2086 2086 HOH HOH . I 5 HOH A 87 2087 2087 HOH HOH . I 5 HOH A 88 2088 2088 HOH HOH . I 5 HOH A 89 2089 2089 HOH HOH . I 5 HOH A 90 2090 2090 HOH HOH . I 5 HOH A 91 2091 2091 HOH HOH . I 5 HOH A 92 2092 2092 HOH HOH . J 5 HOH B 1 4001 4001 HOH HOH . J 5 HOH B 2 4002 4002 HOH HOH . J 5 HOH B 3 4003 4003 HOH HOH . J 5 HOH B 4 4004 4004 HOH HOH . J 5 HOH B 5 4005 4005 HOH HOH . J 5 HOH B 6 4006 4006 HOH HOH . J 5 HOH B 7 4007 4007 HOH HOH . J 5 HOH B 8 4008 4008 HOH HOH . J 5 HOH B 9 4009 4009 HOH HOH . J 5 HOH B 10 4010 4010 HOH HOH . J 5 HOH B 11 4011 4011 HOH HOH . J 5 HOH B 12 4012 4012 HOH HOH . J 5 HOH B 13 4013 4013 HOH HOH . J 5 HOH B 14 4014 4014 HOH HOH . J 5 HOH B 15 4015 4015 HOH HOH . J 5 HOH B 16 4016 4016 HOH HOH . J 5 HOH B 17 4017 4017 HOH HOH . J 5 HOH B 18 4018 4018 HOH HOH . J 5 HOH B 19 4019 4019 HOH HOH . J 5 HOH B 20 4020 4020 HOH HOH . J 5 HOH B 21 4021 4021 HOH HOH . J 5 HOH B 22 4022 4022 HOH HOH . J 5 HOH B 23 4023 4023 HOH HOH . J 5 HOH B 24 4024 4024 HOH HOH . J 5 HOH B 25 4025 4025 HOH HOH . J 5 HOH B 26 4026 4026 HOH HOH . J 5 HOH B 27 4027 4027 HOH HOH . J 5 HOH B 28 4028 4028 HOH HOH . J 5 HOH B 29 4029 4029 HOH HOH . J 5 HOH B 30 4030 4030 HOH HOH . J 5 HOH B 31 4031 4031 HOH HOH . J 5 HOH B 32 4032 4032 HOH HOH . J 5 HOH B 33 4033 4033 HOH HOH . J 5 HOH B 34 4034 4034 HOH HOH . J 5 HOH B 35 4035 4035 HOH HOH . J 5 HOH B 36 4036 4036 HOH HOH . J 5 HOH B 37 4037 4037 HOH HOH . J 5 HOH B 38 4038 4038 HOH HOH . J 5 HOH B 39 4039 4039 HOH HOH . J 5 HOH B 40 4040 4040 HOH HOH . J 5 HOH B 41 4041 4041 HOH HOH . J 5 HOH B 42 4042 4042 HOH HOH . J 5 HOH B 43 4043 4043 HOH HOH . J 5 HOH B 44 4044 4044 HOH HOH . J 5 HOH B 45 4045 4045 HOH HOH . J 5 HOH B 46 4046 4046 HOH HOH . J 5 HOH B 47 4047 4047 HOH HOH . J 5 HOH B 48 4048 4048 HOH HOH . J 5 HOH B 49 4049 4049 HOH HOH . J 5 HOH B 50 4050 4050 HOH HOH . J 5 HOH B 51 4051 4051 HOH HOH . J 5 HOH B 52 4052 4052 HOH HOH . J 5 HOH B 53 4053 4053 HOH HOH . J 5 HOH B 54 4054 4054 HOH HOH . J 5 HOH B 55 4055 4055 HOH HOH . J 5 HOH B 56 4056 4056 HOH HOH . J 5 HOH B 57 4057 4057 HOH HOH . J 5 HOH B 58 4058 4058 HOH HOH . J 5 HOH B 59 4059 4059 HOH HOH . J 5 HOH B 60 4060 4060 HOH HOH . J 5 HOH B 61 4061 4061 HOH HOH . J 5 HOH B 62 4062 4062 HOH HOH . J 5 HOH B 63 4063 4063 HOH HOH . J 5 HOH B 64 4064 4064 HOH HOH . J 5 HOH B 65 4065 4065 HOH HOH . J 5 HOH B 66 4066 4066 HOH HOH . J 5 HOH B 67 4067 4067 HOH HOH . J 5 HOH B 68 4068 4068 HOH HOH . J 5 HOH B 69 4069 4069 HOH HOH . J 5 HOH B 70 4070 4070 HOH HOH . J 5 HOH B 71 4071 4071 HOH HOH . J 5 HOH B 72 4072 4072 HOH HOH . J 5 HOH B 73 4073 4073 HOH HOH . J 5 HOH B 74 4074 4074 HOH HOH . J 5 HOH B 75 4075 4075 HOH HOH . J 5 HOH B 76 4076 4076 HOH HOH . J 5 HOH B 77 4077 4077 HOH HOH . J 5 HOH B 78 4078 4078 HOH HOH . J 5 HOH B 79 4079 4079 HOH HOH . J 5 HOH B 80 4080 4080 HOH HOH . J 5 HOH B 81 4081 4081 HOH HOH . J 5 HOH B 82 4082 4082 HOH HOH . J 5 HOH B 83 4083 4083 HOH HOH . J 5 HOH B 84 4084 4084 HOH HOH . J 5 HOH B 85 4085 4085 HOH HOH . J 5 HOH B 86 4086 4086 HOH HOH . J 5 HOH B 87 4087 4087 HOH HOH . J 5 HOH B 88 4088 4088 HOH HOH . J 5 HOH B 89 4089 4089 HOH HOH . J 5 HOH B 90 4090 4090 HOH HOH . J 5 HOH B 91 4091 4091 HOH HOH . J 5 HOH B 92 4092 4092 HOH HOH . J 5 HOH B 93 4093 4093 HOH HOH . J 5 HOH B 94 4094 4094 HOH HOH . J 5 HOH B 95 4095 4095 HOH HOH . J 5 HOH B 96 4096 4096 HOH HOH . J 5 HOH B 97 4097 4097 HOH HOH . J 5 HOH B 98 4098 4098 HOH HOH . J 5 HOH B 99 4099 4099 HOH HOH . J 5 HOH B 100 4100 4100 HOH HOH . J 5 HOH B 101 4101 4101 HOH HOH . J 5 HOH B 102 4102 4102 HOH HOH . J 5 HOH B 103 4103 4103 HOH HOH . J 5 HOH B 104 4104 4104 HOH HOH . J 5 HOH B 105 4105 4105 HOH HOH . J 5 HOH B 106 4106 4106 HOH HOH . J 5 HOH B 107 4107 4107 HOH HOH . J 5 HOH B 108 4108 4108 HOH HOH . J 5 HOH B 109 4109 4109 HOH HOH . J 5 HOH B 110 4110 4110 HOH HOH . J 5 HOH B 111 4111 4111 HOH HOH . J 5 HOH B 112 4112 4112 HOH HOH . J 5 HOH B 113 4113 4113 HOH HOH . J 5 HOH B 114 4114 4114 HOH HOH . J 5 HOH B 115 4115 4115 HOH HOH . J 5 HOH B 116 4116 4116 HOH HOH . J 5 HOH B 117 4117 4117 HOH HOH . J 5 HOH B 118 4118 4118 HOH HOH . J 5 HOH B 119 4119 4119 HOH HOH . J 5 HOH B 120 4120 4120 HOH HOH . J 5 HOH B 121 4121 4121 HOH HOH . J 5 HOH B 122 4122 4122 HOH HOH . J 5 HOH B 123 4123 4123 HOH HOH . J 5 HOH B 124 4124 4124 HOH HOH . J 5 HOH B 125 4125 4125 HOH HOH . J 5 HOH B 126 4126 4126 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BME . . . G 4 27.108 30.426 29.74 1 29.34 ? C1 BME 3136 B 1 HETATM 2 C C2 BME . . . G 4 26.212 29.206 29.673 1 28.23 ? C2 BME 3136 B 1 HETATM 3 O O1 BME . . . G 4 27.958 30.513 28.611 1 31.13 ? O1 BME 3136 B 1 HETATM 4 S S2 BME . . . G 4 25.021 29.281 28.302 1 26.66 ? S2 BME 3136 B 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #