data_1W8P # _model_server_result.job_id eo81Jl-aE9F2wS0Ns7KPww _model_server_result.datetime_utc '2024-11-17 12:45:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1w8p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":1030}' # _entry.id 1W8P # _exptl.entry_id 1W8P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.58 _cell.angle_gamma 90 _cell.entry_id 1W8P _cell.length_a 59.903 _cell.length_b 62.116 _cell.length_c 47.796 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1W8P _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 N N N ? 4 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 11 A CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.982 ? disulf ? disulf2 A SG CYS 7 A CYS 7 1_555 B SG CYS 7 B CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? disulf ? disulf3 A SG CYS 20 A CYS 20 1_555 B SG CYS 19 B CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf4 C SG CYS 6 C CYS 6 1_555 C SG CYS 11 C CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? disulf ? disulf5 C SG CYS 7 C CYS 7 1_555 D SG CYS 7 D CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? disulf ? disulf6 C SG CYS 20 C CYS 20 1_555 D SG CYS 19 D CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf7 E SG CYS 6 E CYS 6 1_555 E SG CYS 11 E CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? disulf ? disulf8 E SG CYS 7 E CYS 7 1_555 F SG CYS 7 F CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf9 E SG CYS 20 E CYS 20 1_555 F SG CYS 19 F CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf10 G SG CYS 6 G CYS 6 1_555 G SG CYS 11 G CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? disulf ? disulf11 G SG CYS 7 G CYS 7 1_555 H SG CYS 7 H CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf12 G SG CYS 20 G CYS 20 1_555 H SG CYS 19 H CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf13 I SG CYS 6 I CYS 6 1_555 I SG CYS 11 I CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.956 ? disulf ? disulf14 I SG CYS 7 I CYS 7 1_555 J SG CYS 7 J CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf15 I SG CYS 20 I CYS 20 1_555 J SG CYS 19 J CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? disulf ? disulf16 K SG CYS 6 K CYS 6 1_555 K SG CYS 11 K CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? disulf ? disulf17 K SG CYS 7 K CYS 7 1_555 L SG CYS 7 L CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf18 K SG CYS 20 K CYS 20 1_555 L SG CYS 19 L CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc1 B NE2 HIS 10 B HIS 10 1_555 N ZN ZN . B ZN 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? metalc ? metalc2 N ZN ZN . B ZN 1030 1_555 V O HOH . B HOH 2009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc3 N ZN ZN . B ZN 1030 1_555 F NE2 HIS 10 F HIS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc4 N ZN ZN . B ZN 1030 1_555 J NE2 HIS 10 J HIS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc5 D NE2 HIS 10 D HIS 10 1_555 P ZN ZN . D ZN 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc6 P ZN ZN . D ZN 1030 1_555 X O HOH . D HOH 2012 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? metalc ? metalc7 P ZN ZN . D ZN 1030 1_555 H NE2 HIS 10 H HIS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc8 P ZN ZN . D ZN 1030 1_555 L NE2 HIS 10 L HIS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1W8P _atom_sites.fract_transf_matrix[1][1] 0.016694 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006268 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016099 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022349 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 3 IPH A 1 1022 1022 IPH IPH . N 4 ZN B 1 1030 1030 ZN ZN . O 3 IPH C 1 1022 1022 IPH IPH . P 4 ZN D 1 1030 1030 ZN ZN . Q 3 IPH E 1 1022 1022 IPH IPH . R 3 IPH G 1 1022 1022 IPH IPH . S 3 IPH I 1 1022 1022 IPH IPH . T 3 IPH K 1 1022 1022 IPH IPH . U 5 HOH A 1 2001 2001 HOH HOH . U 5 HOH A 2 2002 2002 HOH HOH . U 5 HOH A 3 2003 2003 HOH HOH . V 5 HOH B 1 2001 2001 HOH HOH . V 5 HOH B 2 2002 2002 HOH HOH . V 5 HOH B 3 2003 2003 HOH HOH . V 5 HOH B 4 2004 2004 HOH HOH . V 5 HOH B 5 2005 2005 HOH HOH . V 5 HOH B 6 2006 2006 HOH HOH . V 5 HOH B 7 2007 2007 HOH HOH . V 5 HOH B 8 2008 2008 HOH HOH . V 5 HOH B 9 2009 2009 HOH HOH . W 5 HOH C 1 2001 2001 HOH HOH . W 5 HOH C 2 2002 2002 HOH HOH . W 5 HOH C 3 2003 2003 HOH HOH . W 5 HOH C 4 2004 2004 HOH HOH . W 5 HOH C 5 2005 2005 HOH HOH . W 5 HOH C 6 2006 2006 HOH HOH . X 5 HOH D 1 2001 2001 HOH HOH . X 5 HOH D 2 2002 2002 HOH HOH . X 5 HOH D 3 2003 2003 HOH HOH . X 5 HOH D 4 2004 2004 HOH HOH . X 5 HOH D 5 2005 2005 HOH HOH . X 5 HOH D 6 2006 2006 HOH HOH . X 5 HOH D 7 2007 2007 HOH HOH . X 5 HOH D 8 2008 2008 HOH HOH . X 5 HOH D 9 2009 2009 HOH HOH . X 5 HOH D 10 2010 2010 HOH HOH . X 5 HOH D 11 2011 2011 HOH HOH . X 5 HOH D 12 2012 2012 HOH HOH . Y 5 HOH E 1 2001 2001 HOH HOH . Z 5 HOH F 1 2001 2001 HOH HOH . Z 5 HOH F 2 2002 2002 HOH HOH . Z 5 HOH F 3 2003 2003 HOH HOH . Z 5 HOH F 4 2004 2004 HOH HOH . Z 5 HOH F 5 2005 2005 HOH HOH . Z 5 HOH F 6 2006 2006 HOH HOH . Z 5 HOH F 7 2007 2007 HOH HOH . Z 5 HOH F 8 2008 2008 HOH HOH . Z 5 HOH F 9 2009 2009 HOH HOH . Z 5 HOH F 10 2010 2010 HOH HOH . Z 5 HOH F 11 2011 2011 HOH HOH . Z 5 HOH F 12 2012 2012 HOH HOH . AA 5 HOH G 1 2001 2001 HOH HOH . AA 5 HOH G 2 2002 2002 HOH HOH . AA 5 HOH G 3 2003 2003 HOH HOH . AA 5 HOH G 4 2004 2004 HOH HOH . BA 5 HOH H 1 2001 2001 HOH HOH . BA 5 HOH H 2 2002 2002 HOH HOH . BA 5 HOH H 3 2003 2003 HOH HOH . BA 5 HOH H 4 2004 2004 HOH HOH . BA 5 HOH H 5 2005 2005 HOH HOH . BA 5 HOH H 6 2006 2006 HOH HOH . BA 5 HOH H 7 2007 2007 HOH HOH . BA 5 HOH H 8 2008 2008 HOH HOH . BA 5 HOH H 9 2009 2009 HOH HOH . BA 5 HOH H 10 2010 2010 HOH HOH . CA 5 HOH I 1 2001 2001 HOH HOH . CA 5 HOH I 2 2002 2002 HOH HOH . DA 5 HOH J 1 2001 2001 HOH HOH . DA 5 HOH J 2 2002 2002 HOH HOH . DA 5 HOH J 3 2003 2003 HOH HOH . DA 5 HOH J 4 2004 2004 HOH HOH . DA 5 HOH J 5 2005 2005 HOH HOH . DA 5 HOH J 6 2006 2006 HOH HOH . DA 5 HOH J 7 2007 2007 HOH HOH . DA 5 HOH J 8 2008 2008 HOH HOH . DA 5 HOH J 9 2009 2009 HOH HOH . EA 5 HOH K 1 2001 2001 HOH HOH . EA 5 HOH K 2 2002 2002 HOH HOH . EA 5 HOH K 3 2003 2003 HOH HOH . EA 5 HOH K 4 2004 2004 HOH HOH . EA 5 HOH K 5 2005 2005 HOH HOH . FA 5 HOH L 1 2001 2001 HOH HOH . FA 5 HOH L 2 2002 2002 HOH HOH . FA 5 HOH L 3 2003 2003 HOH HOH . FA 5 HOH L 4 2004 2004 HOH HOH . FA 5 HOH L 5 2005 2005 HOH HOH . FA 5 HOH L 6 2006 2006 HOH HOH . FA 5 HOH L 7 2007 2007 HOH HOH . FA 5 HOH L 8 2008 2008 HOH HOH . FA 5 HOH L 9 2009 2009 HOH HOH . FA 5 HOH L 10 2010 2010 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id P _atom_site.label_entity_id 4 _atom_site.Cartn_x 10.225 _atom_site.Cartn_y 5.527 _atom_site.Cartn_z 1.841 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 26.63 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1030 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 228 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #