data_1W8Q
#
_model_server_result.job_id            8wxMAVQqyE8vVguOOnDIkw 
_model_server_result.datetime_utc      '2024-11-29 03:20:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1w8q 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"MA","auth_seq_id":511}' 
#
_entry.id    1W8Q 
#
_exptl.entry_id    1W8Q 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              58.933 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'COBALT (II) ION' 
_entity.pdbx_number_of_molecules    18 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.05 
_cell.angle_gamma         90 
_cell.entry_id            1W8Q 
_cell.length_a            104.56 
_cell.length_b            94.37 
_cell.length_c            106.96 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1W8Q 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PQS monomeric 1 author_and_software_defined_assembly 1 
PQS monomeric 1 author_and_software_defined_assembly 2 
PQS monomeric 1 author_and_software_defined_assembly 3 
PQS monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,G,H,I,J,K,L,M,N,QA 1 1 
B,O,P,Q,R,S,T,U,V,W,RA 2 1 
C,X,Y,Z,AA,BA,CA,DA,EA,FA,SA 3 1 
D,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,TA 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
? 3 N N N 
? 3 T N N 
? 3 U N N 
? 3 V N N 
? 3 W N N 
? 3 CA N N 
? 3 DA N N 
? 3 EA N N 
? 3 FA N N 
? 3 LA N N 
? 3 MA N N 
? 3 NA N N 
? 3 OA N N 
? 3 PA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O LEU 63 A LEU 63 1_555 L CO CO . A CO 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? 
metalc ? metalc2 A ND1 HIS 67 A HIS 67 1_555 L CO CO . A CO 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.732 ? 
metalc ? metalc3 A OD1 ASP 102 A ASP 102 1_555 N CO CO . A CO 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? 
metalc ? metalc4 A NE2 HIS 158 A HIS 158 1_555 M CO CO . A CO 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? 
metalc ? metalc5 A O GLU 188 A GLU 188 1_555 J CO CO . A CO 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
metalc ? metalc6 A NE2 HIS 247 A HIS 247 1_555 J CO CO . A CO 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? 
metalc ? metalc7 A OE1 GLU 251 A GLU 251 1_555 J CO CO . A CO 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
metalc ? metalc8 A NE2 HIS 282 A HIS 282 1_555 N CO CO . A CO 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? 
metalc ? metalc9 A ND1 HIS 462 A HIS 462 1_555 K CO CO . A CO 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? 
metalc ? metalc10 B O LEU 63 B LEU 63 1_555 U CO CO . B CO 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.69 ? 
metalc ? metalc11 B ND1 HIS 67 B HIS 67 1_555 U CO CO . B CO 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? 
metalc ? metalc12 B OD2 ASP 102 B ASP 102 1_555 W CO CO . B CO 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
metalc ? metalc13 B NE2 HIS 158 B HIS 158 1_555 V CO CO . B CO 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? 
metalc ? metalc14 B O GLU 188 B GLU 188 1_555 T CO CO . B CO 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? 
metalc ? metalc15 B NE2 HIS 247 B HIS 247 1_555 T CO CO . B CO 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? 
metalc ? metalc16 B OE2 GLU 251 B GLU 251 1_555 T CO CO . B CO 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? 
metalc ? metalc17 B NE2 HIS 282 B HIS 282 1_555 W CO CO . B CO 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.925 ? 
metalc ? metalc18 C ND1 HIS 67 C HIS 67 1_555 DA CO CO . C CO 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? 
metalc ? metalc19 C OD2 ASP 102 C ASP 102 1_555 FA CO CO . C CO 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? 
metalc ? metalc20 C NE2 HIS 158 C HIS 158 1_555 EA CO CO . C CO 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.601 ? 
metalc ? metalc21 C OE2 GLU 168 C GLU 168 1_555 EA CO CO . C CO 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? 
metalc ? metalc22 C O GLU 188 C GLU 188 1_555 CA CO CO . C CO 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? 
metalc ? metalc23 C NE2 HIS 247 C HIS 247 1_555 CA CO CO . C CO 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? 
metalc ? metalc24 C OE1 GLU 251 C GLU 251 1_555 CA CO CO . C CO 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.572 ? 
metalc ? metalc25 C NE2 HIS 282 C HIS 282 1_555 FA CO CO . C CO 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.513 ? 
metalc ? metalc26 D O LEU 63 D LEU 63 1_555 NA CO CO . D CO 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
metalc ? metalc27 D ND1 HIS 67 D HIS 67 1_555 NA CO CO . D CO 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.716 ? 
metalc ? metalc28 D OD2 ASP 102 D ASP 102 1_555 PA CO CO . D CO 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.6 ? 
metalc ? metalc29 D NE2 HIS 158 D HIS 158 1_555 OA CO CO . D CO 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? 
metalc ? metalc30 D O GLU 188 D GLU 188 1_555 LA CO CO . D CO 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? 
metalc ? metalc31 D NE2 HIS 247 D HIS 247 1_555 LA CO CO . D CO 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? 
metalc ? metalc32 D OE2 GLU 251 D GLU 251 1_555 LA CO CO . D CO 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? 
metalc ? metalc33 D NE2 HIS 282 D HIS 282 1_555 PA CO CO . D CO 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? 
metalc ? metalc34 D ND1 HIS 462 D HIS 462 1_555 MA CO CO . D CO 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? 
#
_chem_comp.formula           'Co 2' 
_chem_comp.formula_weight    58.933 
_chem_comp.id                CO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'COBALT (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1W8Q 
_atom_sites.fract_transf_matrix[1][1]    0.009564 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000677 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010597 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009373 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 SO4 A 1 500 500 SO4 SO4 . 
F 2 SO4 A 1 501 501 SO4 SO4 . 
G 2 SO4 A 1 502 502 SO4 SO4 . 
H 2 SO4 A 1 503 503 SO4 SO4 . 
I 2 SO4 A 1 504 504 SO4 SO4 . 
J 3 CO A 1 510 510 CO CO . 
K 3 CO A 1 511 511 CO CO . 
L 3 CO A 1 512 512 CO CO . 
M 3 CO A 1 513 513 CO CO . 
N 3 CO A 1 514 514 CO CO . 
O 2 SO4 B 1 500 500 SO4 SO4 . 
P 2 SO4 B 1 501 501 SO4 SO4 . 
Q 2 SO4 B 1 502 502 SO4 SO4 . 
R 2 SO4 B 1 503 503 SO4 SO4 . 
S 2 SO4 B 1 504 504 SO4 SO4 . 
T 3 CO B 1 510 510 CO CO . 
U 3 CO B 1 512 512 CO CO . 
V 3 CO B 1 513 513 CO CO . 
W 3 CO B 1 514 514 CO CO . 
X 2 SO4 C 1 500 500 SO4 SO4 . 
Y 2 SO4 C 1 501 501 SO4 SO4 . 
Z 2 SO4 C 1 502 502 SO4 SO4 . 
AA 2 SO4 C 1 503 503 SO4 SO4 . 
BA 2 SO4 C 1 504 504 SO4 SO4 . 
CA 3 CO C 1 510 510 CO CO . 
DA 3 CO C 1 512 512 CO CO . 
EA 3 CO C 1 513 513 CO CO . 
FA 3 CO C 1 514 514 CO CO . 
GA 2 SO4 D 1 500 500 SO4 SO4 . 
HA 2 SO4 D 1 501 501 SO4 SO4 . 
IA 2 SO4 D 1 502 502 SO4 SO4 . 
JA 2 SO4 D 1 503 503 SO4 SO4 . 
KA 2 SO4 D 1 504 504 SO4 SO4 . 
LA 3 CO D 1 510 510 CO CO . 
MA 3 CO D 1 511 511 CO CO . 
NA 3 CO D 1 512 512 CO CO . 
OA 3 CO D 1 513 513 CO CO . 
PA 3 CO D 1 514 514 CO CO . 
QA 4 HOH A 1 2001 2001 HOH HOH . 
QA 4 HOH A 2 2002 2002 HOH HOH . 
QA 4 HOH A 3 2003 2003 HOH HOH . 
QA 4 HOH A 4 2004 2004 HOH HOH . 
QA 4 HOH A 5 2005 2005 HOH HOH . 
QA 4 HOH A 6 2006 2006 HOH HOH . 
QA 4 HOH A 7 2007 2007 HOH HOH . 
QA 4 HOH A 8 2008 2008 HOH HOH . 
QA 4 HOH A 9 2009 2009 HOH HOH . 
QA 4 HOH A 10 2010 2010 HOH HOH . 
QA 4 HOH A 11 2011 2011 HOH HOH . 
QA 4 HOH A 12 2012 2012 HOH HOH . 
QA 4 HOH A 13 2013 2013 HOH HOH . 
QA 4 HOH A 14 2014 2014 HOH HOH . 
QA 4 HOH A 15 2015 2015 HOH HOH . 
QA 4 HOH A 16 2016 2016 HOH HOH . 
QA 4 HOH A 17 2017 2017 HOH HOH . 
QA 4 HOH A 18 2018 2018 HOH HOH . 
QA 4 HOH A 19 2019 2019 HOH HOH . 
QA 4 HOH A 20 2020 2020 HOH HOH . 
QA 4 HOH A 21 2021 2021 HOH HOH . 
QA 4 HOH A 22 2022 2022 HOH HOH . 
QA 4 HOH A 23 2023 2023 HOH HOH . 
QA 4 HOH A 24 2024 2024 HOH HOH . 
QA 4 HOH A 25 2025 2025 HOH HOH . 
RA 4 HOH B 1 2001 2001 HOH HOH . 
RA 4 HOH B 2 2002 2002 HOH HOH . 
RA 4 HOH B 3 2003 2003 HOH HOH . 
RA 4 HOH B 4 2004 2004 HOH HOH . 
RA 4 HOH B 5 2005 2005 HOH HOH . 
RA 4 HOH B 6 2006 2006 HOH HOH . 
RA 4 HOH B 7 2007 2007 HOH HOH . 
RA 4 HOH B 8 2008 2008 HOH HOH . 
RA 4 HOH B 9 2009 2009 HOH HOH . 
RA 4 HOH B 10 2010 2010 HOH HOH . 
RA 4 HOH B 11 2011 2011 HOH HOH . 
RA 4 HOH B 12 2012 2012 HOH HOH . 
RA 4 HOH B 13 2013 2013 HOH HOH . 
RA 4 HOH B 14 2014 2014 HOH HOH . 
RA 4 HOH B 15 2015 2015 HOH HOH . 
RA 4 HOH B 16 2016 2016 HOH HOH . 
RA 4 HOH B 17 2017 2017 HOH HOH . 
RA 4 HOH B 18 2018 2018 HOH HOH . 
SA 4 HOH C 1 2001 2001 HOH HOH . 
SA 4 HOH C 2 2002 2002 HOH HOH . 
SA 4 HOH C 3 2003 2003 HOH HOH . 
SA 4 HOH C 4 2004 2004 HOH HOH . 
SA 4 HOH C 5 2005 2005 HOH HOH . 
SA 4 HOH C 6 2006 2006 HOH HOH . 
SA 4 HOH C 7 2007 2007 HOH HOH . 
SA 4 HOH C 8 2008 2008 HOH HOH . 
SA 4 HOH C 9 2009 2009 HOH HOH . 
SA 4 HOH C 10 2010 2010 HOH HOH . 
SA 4 HOH C 11 2011 2011 HOH HOH . 
SA 4 HOH C 12 2012 2012 HOH HOH . 
SA 4 HOH C 13 2013 2013 HOH HOH . 
SA 4 HOH C 14 2014 2014 HOH HOH . 
TA 4 HOH D 1 2001 2001 HOH HOH . 
TA 4 HOH D 2 2002 2002 HOH HOH . 
TA 4 HOH D 3 2003 2003 HOH HOH . 
TA 4 HOH D 4 2004 2004 HOH HOH . 
TA 4 HOH D 5 2005 2005 HOH HOH . 
TA 4 HOH D 6 2006 2006 HOH HOH . 
TA 4 HOH D 7 2007 2007 HOH HOH . 
TA 4 HOH D 8 2008 2008 HOH HOH . 
TA 4 HOH D 9 2009 2009 HOH HOH . 
TA 4 HOH D 10 2010 2010 HOH HOH . 
TA 4 HOH D 11 2011 2011 HOH HOH . 
TA 4 HOH D 12 2012 2012 HOH HOH . 
TA 4 HOH D 13 2013 2013 HOH HOH . 
TA 4 HOH D 14 2014 2014 HOH HOH . 
TA 4 HOH D 15 2015 2015 HOH HOH . 
TA 4 HOH D 16 2016 2016 HOH HOH . 
TA 4 HOH D 17 2017 2017 HOH HOH . 
TA 4 HOH D 18 2018 2018 HOH HOH . 
TA 4 HOH D 19 2019 2019 HOH HOH . 
TA 4 HOH D 20 2020 2020 HOH HOH . 
TA 4 HOH D 21 2021 2021 HOH HOH . 
TA 4 HOH D 22 2022 2022 HOH HOH . 
TA 4 HOH D 23 2023 2023 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CO 
_atom_site.label_atom_id         CO 
_atom_site.label_comp_id         CO 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         MA 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               57.01 
_atom_site.Cartn_y               67.209 
_atom_site.Cartn_z               1.778 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        49.06 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CO 
_atom_site.auth_comp_id          CO 
_atom_site.auth_seq_id           511 
_atom_site.auth_asym_id          D 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#