data_1WA6
#
_model_server_result.job_id            w0OhT0rsGe4RtYaYzmgGQQ 
_model_server_result.datetime_utc      '2024-11-28 14:02:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1wa6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1309}' 
#
_entry.id    1WA6 
#
_exptl.entry_id    1WA6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              94.971 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHATE ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1WA6 
_cell.length_a            70.34 
_cell.length_b            107.06 
_cell.length_c            108.38 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1WA6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PQS 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_566 x,-y+1,-z+1 1 0 0 0 -1 0 0 0 -1 0 107.06 108.38 
3 'crystal symmetry operation' 3_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 70.34 0 108.38 
4 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 70.34 107.06 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C THR 20 X THR 20 1_555 A N MSE 21 X MSE 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
covale ? covale2 A C MSE 21 X MSE 21 1_555 A N GLU 22 X GLU 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale3 A C GLU 22 X GLU 22 1_555 A N MSE 23 X MSE 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale4 A C MSE 23 X MSE 23 1_555 A N ILE 24 X ILE 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.355 ? 
covale ? covale5 A C VAL 45 X VAL 45 1_555 A N MSE 46 X MSE 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale6 A C MSE 46 X MSE 46 1_555 A N ASP 47 X ASP 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale7 A C LYS 51 X LYS 51 1_555 A N MSE 52 X MSE 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.308 ? 
covale ? covale8 A C MSE 52 X MSE 52 1_555 A N THR 53 X THR 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? 
covale ? covale9 A C CYS 60 X CYS 60 1_555 A N MSE 61 X MSE 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? 
covale ? covale10 A C MSE 61 X MSE 61 1_555 A N GLU 62 X GLU 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale11 A C ASP 83 X ASP 83 1_555 A N MSE 84 X MSE 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.296 ? 
covale ? covale12 A C MSE 84 X MSE 84 1_555 A N ASP 85 X ASP 85 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale13 A C VAL 113 X VAL 113 1_555 A N MSE 114 X MSE 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale14 A C MSE 114 X MSE 114 1_555 A N ARG 115 X ARG 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? 
covale ? covale15 A C PRO 208 X PRO 208 1_555 A N MSE 209 X MSE 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale16 A C MSE 209 X MSE 209 1_555 A N ARG 210 X ARG 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.307 ? 
covale ? covale17 A C VAL 232 X VAL 232 1_555 A N MSE 233 X MSE 233 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.313 ? 
covale ? covale18 A C MSE 233 X MSE 233 1_555 A N HIS 234 X HIS 234 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale19 A C ARG 244 X ARG 244 1_555 A N MSE 245 X MSE 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale20 A C MSE 245 X MSE 245 1_555 A N SER 246 X SER 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? 
covale ? covale21 A C TYR 285 X TYR 285 1_555 A N MSE 286 X MSE 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.309 ? 
covale ? covale22 A C MSE 286 X MSE 286 1_555 A N LYS 287 X LYS 287 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
covale ? covale23 A C ALA 303 X ALA 303 1_555 A N MSE 304 X MSE 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? 
covale ? covale24 A C MSE 304 X MSE 304 1_555 A N LYS 305 X LYS 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
covale ? covale25 A C ALA 306 X ALA 306 1_555 A N MSE 307 X MSE 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
metalc ? metalc1 A NE2 HIS 177 X HIS 177 1_555 B FE FE2 . X FE2 1307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? 
metalc ? metalc2 A OD1 ASP 179 X ASP 179 1_555 B FE FE2 . X FE2 1307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? 
metalc ? metalc3 A NE2 HIS 234 X HIS 234 1_555 B FE FE2 . X FE2 1307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? 
metalc ? metalc4 B FE FE2 . X FE2 1307 1_555 C O3 PO4 . X PO4 1308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? 
#
_chem_comp.formula           'O4 P -3' 
_chem_comp.formula_weight    94.971 
_chem_comp.id                PO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1 PO4 doub 260 n n 
P O2 PO4 sing 261 n n 
P O3 PO4 sing 262 n n 
P O4 PO4 sing 263 n n 
#
_atom_sites.entry_id                     1WA6 
_atom_sites.fract_transf_matrix[1][1]    0.014217 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009341 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009227 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FE2 X 1 1307 1307 FE2 FE2 . 
C 3 PO4 X 1 1308 1308 PO4 PO4 . 
D 3 PO4 X 1 1309 1309 PO4 PO4 . 
E 4 SO4 X 1 1310 1310 SO4 SO4 . 
F 5 HOH X 1 2001 2001 HOH HOH . 
F 5 HOH X 2 2002 2002 HOH HOH . 
F 5 HOH X 3 2003 2003 HOH HOH . 
F 5 HOH X 4 2004 2004 HOH HOH . 
F 5 HOH X 5 2005 2005 HOH HOH . 
F 5 HOH X 6 2006 2006 HOH HOH . 
F 5 HOH X 7 2007 2007 HOH HOH . 
F 5 HOH X 8 2008 2008 HOH HOH . 
F 5 HOH X 9 2009 2009 HOH HOH . 
F 5 HOH X 10 2010 2010 HOH HOH . 
F 5 HOH X 11 2011 2011 HOH HOH . 
F 5 HOH X 12 2012 2012 HOH HOH . 
F 5 HOH X 13 2013 2013 HOH HOH . 
F 5 HOH X 14 2014 2014 HOH HOH . 
F 5 HOH X 15 2015 2015 HOH HOH . 
F 5 HOH X 16 2016 2016 HOH HOH . 
F 5 HOH X 17 2017 2017 HOH HOH . 
F 5 HOH X 18 2018 2018 HOH HOH . 
F 5 HOH X 19 2019 2019 HOH HOH . 
F 5 HOH X 20 2020 2020 HOH HOH . 
F 5 HOH X 21 2021 2021 HOH HOH . 
F 5 HOH X 22 2022 2022 HOH HOH . 
F 5 HOH X 23 2023 2023 HOH HOH . 
F 5 HOH X 24 2024 2024 HOH HOH . 
F 5 HOH X 25 2025 2025 HOH HOH . 
F 5 HOH X 26 2026 2026 HOH HOH . 
F 5 HOH X 27 2027 2027 HOH HOH . 
F 5 HOH X 28 2028 2028 HOH HOH . 
F 5 HOH X 29 2029 2029 HOH HOH . 
F 5 HOH X 30 2030 2030 HOH HOH . 
F 5 HOH X 31 2031 2031 HOH HOH . 
F 5 HOH X 32 2032 2032 HOH HOH . 
F 5 HOH X 33 2033 2033 HOH HOH . 
F 5 HOH X 34 2034 2034 HOH HOH . 
F 5 HOH X 35 2035 2035 HOH HOH . 
F 5 HOH X 36 2036 2036 HOH HOH . 
F 5 HOH X 37 2037 2037 HOH HOH . 
F 5 HOH X 38 2038 2038 HOH HOH . 
F 5 HOH X 39 2039 2039 HOH HOH . 
F 5 HOH X 40 2040 2040 HOH HOH . 
F 5 HOH X 41 2041 2041 HOH HOH . 
F 5 HOH X 42 2042 2042 HOH HOH . 
F 5 HOH X 43 2043 2043 HOH HOH . 
F 5 HOH X 44 2044 2044 HOH HOH . 
F 5 HOH X 45 2045 2045 HOH HOH . 
F 5 HOH X 46 2046 2046 HOH HOH . 
F 5 HOH X 47 2047 2047 HOH HOH . 
F 5 HOH X 48 2048 2048 HOH HOH . 
F 5 HOH X 49 2049 2049 HOH HOH . 
F 5 HOH X 50 2050 2050 HOH HOH . 
F 5 HOH X 51 2051 2051 HOH HOH . 
F 5 HOH X 52 2052 2052 HOH HOH . 
F 5 HOH X 53 2053 2053 HOH HOH . 
F 5 HOH X 54 2054 2054 HOH HOH . 
F 5 HOH X 55 2055 2055 HOH HOH . 
F 5 HOH X 56 2056 2056 HOH HOH . 
F 5 HOH X 57 2057 2057 HOH HOH . 
F 5 HOH X 58 2058 2058 HOH HOH . 
F 5 HOH X 59 2059 2059 HOH HOH . 
F 5 HOH X 60 2060 2060 HOH HOH . 
F 5 HOH X 61 2061 2061 HOH HOH . 
F 5 HOH X 62 2062 2062 HOH HOH . 
F 5 HOH X 63 2063 2063 HOH HOH . 
F 5 HOH X 64 2064 2064 HOH HOH . 
F 5 HOH X 65 2065 2065 HOH HOH . 
F 5 HOH X 66 2066 2066 HOH HOH . 
F 5 HOH X 67 2067 2067 HOH HOH . 
F 5 HOH X 68 2068 2068 HOH HOH . 
F 5 HOH X 69 2069 2069 HOH HOH . 
F 5 HOH X 70 2070 2070 HOH HOH . 
F 5 HOH X 71 2071 2071 HOH HOH . 
F 5 HOH X 72 2072 2072 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P PO4 . . . D 3 21.361 25.641 20.655 1 105.19 ? P PO4 1309 X 1 
HETATM 2 O O1 PO4 . . . D 3 20.44 25.433 21.86 1 101.87 ? O1 PO4 1309 X 1 
HETATM 3 O O2 PO4 . . . D 3 20.902 26.723 19.667 1 103.36 ? O2 PO4 1309 X 1 
HETATM 4 O O3 PO4 . . . D 3 21.502 24.296 19.992 1 106.58 ? O3 PO4 1309 X 1 
HETATM 5 O O4 PO4 . . . D 3 22.788 25.952 21.059 1 105.2 ? O4 PO4 1309 X 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           310 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           5 
#