data_1WDU # _model_server_result.job_id ezl64BkSQKjZLnbO_rsvoA _model_server_result.datetime_utc '2025-01-02 20:07:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1wdu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":249}' # _entry.id 1WDU # _exptl.entry_id 1WDU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1WDU _cell.length_a 64.645 _cell.length_b 64.645 _cell.length_c 117.315 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1WDU _symmetry.cell_setting ? _symmetry.Int_Tables_number 145 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,F 1 1 B,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 1WDU _atom_sites.fract_transf_matrix[1][1] 0.015469 _atom_sites.fract_transf_matrix[1][2] 0.008931 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017862 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008524 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 249 1 PO4 PO4 . D 3 CL A 1 250 2 CL CL . E 3 CL B 1 249 1 CL CL . F 4 HOH A 1 251 4 HOH WAT . F 4 HOH A 2 252 6 HOH WAT . F 4 HOH A 3 253 7 HOH WAT . F 4 HOH A 4 254 15 HOH WAT . F 4 HOH A 5 255 16 HOH WAT . F 4 HOH A 6 256 19 HOH WAT . F 4 HOH A 7 257 20 HOH WAT . F 4 HOH A 8 258 21 HOH WAT . F 4 HOH A 9 259 22 HOH WAT . F 4 HOH A 10 260 24 HOH WAT . F 4 HOH A 11 261 25 HOH WAT . F 4 HOH A 12 262 34 HOH WAT . F 4 HOH A 13 263 37 HOH WAT . F 4 HOH A 14 264 39 HOH WAT . F 4 HOH A 15 265 40 HOH WAT . F 4 HOH A 16 266 42 HOH WAT . F 4 HOH A 17 267 45 HOH WAT . F 4 HOH A 18 268 47 HOH WAT . F 4 HOH A 19 269 51 HOH WAT . F 4 HOH A 20 270 54 HOH WAT . G 4 HOH B 1 250 1 HOH WAT . G 4 HOH B 2 251 2 HOH WAT . G 4 HOH B 3 252 3 HOH WAT . G 4 HOH B 4 253 5 HOH WAT . G 4 HOH B 5 254 8 HOH WAT . G 4 HOH B 6 255 9 HOH WAT . G 4 HOH B 7 256 10 HOH WAT . G 4 HOH B 8 257 11 HOH WAT . G 4 HOH B 9 258 12 HOH WAT . G 4 HOH B 10 259 13 HOH WAT . G 4 HOH B 11 260 14 HOH WAT . G 4 HOH B 12 261 17 HOH WAT . G 4 HOH B 13 262 18 HOH WAT . G 4 HOH B 14 263 23 HOH WAT . G 4 HOH B 15 264 26 HOH WAT . G 4 HOH B 16 265 27 HOH WAT . G 4 HOH B 17 266 28 HOH WAT . G 4 HOH B 18 267 29 HOH WAT . G 4 HOH B 19 268 30 HOH WAT . G 4 HOH B 20 269 31 HOH WAT . G 4 HOH B 21 270 32 HOH WAT . G 4 HOH B 22 271 33 HOH WAT . G 4 HOH B 23 272 35 HOH WAT . G 4 HOH B 24 273 36 HOH WAT . G 4 HOH B 25 274 38 HOH WAT . G 4 HOH B 26 275 41 HOH WAT . G 4 HOH B 27 276 43 HOH WAT . G 4 HOH B 28 277 44 HOH WAT . G 4 HOH B 29 278 46 HOH WAT . G 4 HOH B 30 279 48 HOH WAT . G 4 HOH B 31 280 49 HOH WAT . G 4 HOH B 32 281 50 HOH WAT . G 4 HOH B 33 282 52 HOH WAT . G 4 HOH B 34 283 53 HOH WAT . G 4 HOH B 35 284 55 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . C 2 -30.068 33.826 6.103 1 76.15 ? P PO4 249 A 1 HETATM 2 O O1 PO4 . . . C 2 -29.231 35.128 5.84 1 75.93 ? O1 PO4 249 A 1 HETATM 3 O O2 PO4 . . . C 2 -31.422 33.831 5.428 1 75.78 ? O2 PO4 249 A 1 HETATM 4 O O3 PO4 . . . C 2 -29.212 32.571 5.867 1 75.48 ? O3 PO4 249 A 1 HETATM 5 O O4 PO4 . . . C 2 -30.327 33.844 7.622 1 75.7 ? O4 PO4 249 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 254 _model_server_stats.encode_time_ms 21 _model_server_stats.element_count 5 #