data_1WL8 # _model_server_result.job_id '_caTa4O6cg0TwVlnY5GlgA' _model_server_result.datetime_utc '2025-07-03 01:06:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1wl8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1201}' # _entry.id 1WL8 # _exptl.entry_id 1WL8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 60.052 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1WL8 _cell.length_a 46.808 _cell.length_b 63.48 _cell.length_c 65.161 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1WL8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 111 A GLU 111 1_555 A N SNN 112 A SNN 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.228 ? covale ? covale2 A N1 SNN 112 A SNN 112 1_555 A CA GLU 113 A GLU 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.586 ? covale ? covale3 A C THR 147 A THR 147 1_555 A N CSO 148 A CSO 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 A C CSO 148 A CSO 148 1_555 A N PRO 149 A PRO 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? # _chem_comp.formula 'C2 H4 O2' _chem_comp.formula_weight 60.052 _chem_comp.id ACY _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACY doub 1 n n C OXT ACY sing 2 n n C CH3 ACY sing 3 n n OXT HXT ACY sing 4 n n CH3 H1 ACY sing 5 n n CH3 H2 ACY sing 6 n n CH3 H3 ACY sing 7 n n # _atom_sites.entry_id 1WL8 _atom_sites.fract_transf_matrix[1][1] 0.021364 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015753 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015347 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 1202 202 CL CL . C 3 ACY A 1 1201 201 ACY ACY . D 4 HOH A 1 1203 1 HOH HOH . D 4 HOH A 2 1204 2 HOH HOH . D 4 HOH A 3 1205 3 HOH HOH . D 4 HOH A 4 1206 4 HOH HOH . D 4 HOH A 5 1207 5 HOH HOH . D 4 HOH A 6 1208 6 HOH HOH . D 4 HOH A 7 1209 7 HOH HOH . D 4 HOH A 8 1210 8 HOH HOH . D 4 HOH A 9 1211 9 HOH HOH . D 4 HOH A 10 1212 10 HOH HOH . D 4 HOH A 11 1213 11 HOH HOH . D 4 HOH A 12 1214 12 HOH HOH . D 4 HOH A 13 1215 13 HOH HOH . D 4 HOH A 14 1216 14 HOH HOH . D 4 HOH A 15 1217 15 HOH HOH . D 4 HOH A 16 1218 16 HOH HOH . D 4 HOH A 17 1219 17 HOH HOH . D 4 HOH A 18 1220 18 HOH HOH . D 4 HOH A 19 1221 19 HOH HOH . D 4 HOH A 20 1222 20 HOH HOH . D 4 HOH A 21 1223 21 HOH HOH . D 4 HOH A 22 1224 22 HOH HOH . D 4 HOH A 23 1225 23 HOH HOH . D 4 HOH A 24 1226 24 HOH HOH . D 4 HOH A 25 1227 25 HOH HOH . D 4 HOH A 26 1228 26 HOH HOH . D 4 HOH A 27 1229 27 HOH HOH . D 4 HOH A 28 1230 28 HOH HOH . D 4 HOH A 29 1231 29 HOH HOH . D 4 HOH A 30 1232 30 HOH HOH . D 4 HOH A 31 1233 31 HOH HOH . D 4 HOH A 32 1234 32 HOH HOH . D 4 HOH A 33 1235 33 HOH HOH . D 4 HOH A 34 1236 34 HOH HOH . D 4 HOH A 35 1237 35 HOH HOH . D 4 HOH A 36 1238 36 HOH HOH . D 4 HOH A 37 1239 37 HOH HOH . D 4 HOH A 38 1240 38 HOH HOH . D 4 HOH A 39 1241 39 HOH HOH . D 4 HOH A 40 1242 40 HOH HOH . D 4 HOH A 41 1243 41 HOH HOH . D 4 HOH A 42 1244 42 HOH HOH . D 4 HOH A 43 1245 43 HOH HOH . D 4 HOH A 44 1246 44 HOH HOH . D 4 HOH A 45 1247 45 HOH HOH . D 4 HOH A 46 1248 46 HOH HOH . D 4 HOH A 47 1249 47 HOH HOH . D 4 HOH A 48 1250 48 HOH HOH . D 4 HOH A 49 1251 49 HOH HOH . D 4 HOH A 50 1252 50 HOH HOH . D 4 HOH A 51 1253 51 HOH HOH . D 4 HOH A 52 1254 52 HOH HOH . D 4 HOH A 53 1255 53 HOH HOH . D 4 HOH A 54 1256 54 HOH HOH . D 4 HOH A 55 1257 55 HOH HOH . D 4 HOH A 56 1258 56 HOH HOH . D 4 HOH A 57 1259 57 HOH HOH . D 4 HOH A 58 1260 58 HOH HOH . D 4 HOH A 59 1261 59 HOH HOH . D 4 HOH A 60 1262 60 HOH HOH . D 4 HOH A 61 1263 61 HOH HOH . D 4 HOH A 62 1264 62 HOH HOH . D 4 HOH A 63 1265 63 HOH HOH . D 4 HOH A 64 1266 64 HOH HOH . D 4 HOH A 65 1267 65 HOH HOH . D 4 HOH A 66 1268 66 HOH HOH . D 4 HOH A 67 1269 67 HOH HOH . D 4 HOH A 68 1270 68 HOH HOH . D 4 HOH A 69 1271 69 HOH HOH . D 4 HOH A 70 1272 70 HOH HOH . D 4 HOH A 71 1273 71 HOH HOH . D 4 HOH A 72 1274 72 HOH HOH . D 4 HOH A 73 1275 73 HOH HOH . D 4 HOH A 74 1276 74 HOH HOH . D 4 HOH A 75 1277 75 HOH HOH . D 4 HOH A 76 1278 76 HOH HOH . D 4 HOH A 77 1279 77 HOH HOH . D 4 HOH A 78 1280 78 HOH HOH . D 4 HOH A 79 1281 79 HOH HOH . D 4 HOH A 80 1282 80 HOH HOH . D 4 HOH A 81 1283 81 HOH HOH . D 4 HOH A 82 1284 82 HOH HOH . D 4 HOH A 83 1285 83 HOH HOH . D 4 HOH A 84 1286 84 HOH HOH . D 4 HOH A 85 1287 85 HOH HOH . D 4 HOH A 86 1288 86 HOH HOH . D 4 HOH A 87 1289 87 HOH HOH . D 4 HOH A 88 1290 88 HOH HOH . D 4 HOH A 89 1291 89 HOH HOH . D 4 HOH A 90 1292 90 HOH HOH . D 4 HOH A 91 1293 91 HOH HOH . D 4 HOH A 92 1294 92 HOH HOH . D 4 HOH A 93 1295 93 HOH HOH . D 4 HOH A 94 1296 94 HOH HOH . D 4 HOH A 95 1297 95 HOH HOH . D 4 HOH A 96 1298 96 HOH HOH . D 4 HOH A 97 1299 97 HOH HOH . D 4 HOH A 98 1300 98 HOH HOH . D 4 HOH A 99 1301 99 HOH HOH . D 4 HOH A 100 1302 100 HOH HOH . D 4 HOH A 101 1303 101 HOH HOH . D 4 HOH A 102 1304 102 HOH HOH . D 4 HOH A 103 1305 103 HOH HOH . D 4 HOH A 104 1306 104 HOH HOH . D 4 HOH A 105 1307 105 HOH HOH . D 4 HOH A 106 1308 106 HOH HOH . D 4 HOH A 107 1309 107 HOH HOH . D 4 HOH A 108 1310 108 HOH HOH . D 4 HOH A 109 1311 109 HOH HOH . D 4 HOH A 110 1312 110 HOH HOH . D 4 HOH A 111 1313 111 HOH HOH . D 4 HOH A 112 1314 112 HOH HOH . D 4 HOH A 113 1315 113 HOH HOH . D 4 HOH A 114 1316 114 HOH HOH . D 4 HOH A 115 1317 115 HOH HOH . D 4 HOH A 116 1318 116 HOH HOH . D 4 HOH A 117 1319 117 HOH HOH . D 4 HOH A 118 1320 118 HOH HOH . D 4 HOH A 119 1321 119 HOH HOH . D 4 HOH A 120 1322 120 HOH HOH . D 4 HOH A 121 1323 121 HOH HOH . D 4 HOH A 122 1324 122 HOH HOH . D 4 HOH A 123 1325 123 HOH HOH . D 4 HOH A 124 1326 124 HOH HOH . D 4 HOH A 125 1327 125 HOH HOH . D 4 HOH A 126 1328 126 HOH HOH . D 4 HOH A 127 1329 127 HOH HOH . D 4 HOH A 128 1330 128 HOH HOH . D 4 HOH A 129 1331 129 HOH HOH . D 4 HOH A 130 1332 130 HOH HOH . D 4 HOH A 131 1333 131 HOH HOH . D 4 HOH A 132 1334 132 HOH HOH . D 4 HOH A 133 1335 133 HOH HOH . D 4 HOH A 134 1336 134 HOH HOH . D 4 HOH A 135 1337 135 HOH HOH . D 4 HOH A 136 1338 136 HOH HOH . D 4 HOH A 137 1339 137 HOH HOH . D 4 HOH A 138 1340 138 HOH HOH . D 4 HOH A 139 1341 139 HOH HOH . D 4 HOH A 140 1342 140 HOH HOH . D 4 HOH A 141 1343 141 HOH HOH . D 4 HOH A 142 1344 142 HOH HOH . D 4 HOH A 143 1345 143 HOH HOH . D 4 HOH A 144 1346 144 HOH HOH . D 4 HOH A 145 1347 145 HOH HOH . D 4 HOH A 146 1348 146 HOH HOH . D 4 HOH A 147 1349 147 HOH HOH . D 4 HOH A 148 1350 148 HOH HOH . D 4 HOH A 149 1351 149 HOH HOH . D 4 HOH A 150 1352 150 HOH HOH . D 4 HOH A 151 1353 151 HOH HOH . D 4 HOH A 152 1354 152 HOH HOH . D 4 HOH A 153 1355 153 HOH HOH . D 4 HOH A 154 1356 154 HOH HOH . D 4 HOH A 155 1357 155 HOH HOH . D 4 HOH A 156 1358 156 HOH HOH . D 4 HOH A 157 1359 157 HOH HOH . D 4 HOH A 158 1360 158 HOH HOH . D 4 HOH A 159 1361 159 HOH HOH . D 4 HOH A 160 1362 160 HOH HOH . D 4 HOH A 161 1363 161 HOH HOH . D 4 HOH A 162 1364 162 HOH HOH . D 4 HOH A 163 1365 163 HOH HOH . D 4 HOH A 164 1366 164 HOH HOH . D 4 HOH A 165 1367 165 HOH HOH . D 4 HOH A 166 1368 166 HOH HOH . D 4 HOH A 167 1369 167 HOH HOH . D 4 HOH A 168 1370 168 HOH HOH . D 4 HOH A 169 1371 169 HOH HOH . D 4 HOH A 170 1372 170 HOH HOH . D 4 HOH A 171 1373 171 HOH HOH . D 4 HOH A 172 1374 172 HOH HOH . D 4 HOH A 173 1375 173 HOH HOH . D 4 HOH A 174 1376 174 HOH HOH . D 4 HOH A 175 1377 175 HOH HOH . D 4 HOH A 176 1378 176 HOH HOH . D 4 HOH A 177 1379 177 HOH HOH . D 4 HOH A 178 1380 178 HOH HOH . D 4 HOH A 179 1381 179 HOH HOH . D 4 HOH A 180 1382 180 HOH HOH . D 4 HOH A 181 1383 181 HOH HOH . D 4 HOH A 182 1384 182 HOH HOH . D 4 HOH A 183 1385 183 HOH HOH . D 4 HOH A 184 1386 184 HOH HOH . D 4 HOH A 185 1387 185 HOH HOH . D 4 HOH A 186 1388 186 HOH HOH . D 4 HOH A 187 1389 187 HOH HOH . D 4 HOH A 188 1390 188 HOH HOH . D 4 HOH A 189 1391 189 HOH HOH . D 4 HOH A 190 1392 190 HOH HOH . D 4 HOH A 191 1393 191 HOH HOH . D 4 HOH A 192 1394 192 HOH HOH . D 4 HOH A 193 1395 193 HOH HOH . D 4 HOH A 194 1396 194 HOH HOH . D 4 HOH A 195 1397 195 HOH HOH . D 4 HOH A 196 1398 196 HOH HOH . D 4 HOH A 197 1399 197 HOH HOH . D 4 HOH A 198 1400 198 HOH HOH . D 4 HOH A 199 1401 199 HOH HOH . D 4 HOH A 200 1402 200 HOH HOH . D 4 HOH A 201 1403 201 HOH HOH . D 4 HOH A 202 1404 202 HOH HOH . D 4 HOH A 203 1405 203 HOH HOH . D 4 HOH A 204 1406 204 HOH HOH . D 4 HOH A 205 1407 205 HOH HOH . D 4 HOH A 206 1408 206 HOH HOH . D 4 HOH A 207 1409 207 HOH HOH . D 4 HOH A 208 1410 208 HOH HOH . D 4 HOH A 209 1411 209 HOH HOH . D 4 HOH A 210 1412 210 HOH HOH . D 4 HOH A 211 1413 211 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACY . . . C 3 41.117 21.133 21.576 1 16.26 ? C ACY 1201 A 1 HETATM 2 O O ACY . . . C 3 41.268 21.634 22.712 1 16.17 ? O ACY 1201 A 1 HETATM 3 O OXT ACY . . . C 3 41.023 21.823 20.535 1 16.11 ? OXT ACY 1201 A 1 HETATM 4 C CH3 ACY . . . C 3 41.07 19.638 21.433 1 16.31 ? CH3 ACY 1201 A 1 # _model_server_stats.io_time_ms 41 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #