data_1WOO # _model_server_result.job_id BNGsjJ1tt6ONQn41ooMduw _model_server_result.datetime_utc '2024-11-22 22:00:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1woo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":2887}' # _entry.id 1WOO # _exptl.entry_id 1WOO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 445.429 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (6S)-5,6,7,8-TETRAHYDROFOLATE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1WOO _cell.length_a 52.499 _cell.length_b 53.942 _cell.length_c 149.4 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1WOO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H23 N7 O6' _chem_comp.formula_weight 445.429 _chem_comp.id THG _chem_comp.mon_nstd_flag . _chem_comp.name (6S)-5,6,7,8-TETRAHYDROFOLATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N3 C2 THG sing 290 n y N3 C4 THG sing 291 n y N3 HN3 THG sing 292 n n C2 N1 THG doub 293 n y C2 N2 THG sing 294 n n N1 C8A THG sing 295 n y C8A C4A THG doub 296 n y C8A N8 THG sing 297 n n C4A C4 THG sing 298 n y C4A N5 THG sing 299 n n C4 O4 THG doub 300 n n N8 C7 THG sing 301 n n N8 HN8 THG sing 302 n n C7 C6 THG sing 303 n n C7 HC71 THG sing 304 n n C7 HC72 THG sing 305 n n C6 N5 THG sing 306 n n C6 C9 THG sing 307 n n C6 HC6 THG sing 308 n n N5 HN5 THG sing 309 n n C9 N10 THG sing 310 n n C9 HC91 THG sing 311 n n C9 HC92 THG sing 312 n n N10 C4' THG sing 313 n n N10 H10 THG sing 314 n n C4' C3' THG doub 315 n y C4' C5' THG sing 316 n y C3' C2' THG sing 317 n y C3' HC3 THG sing 318 n n C2' C1' THG doub 319 n y C2' HC2 THG sing 320 n n C1' C6' THG sing 321 n y C1' C11 THG sing 322 n n C6' C5' THG doub 323 n y C6' HC61 THG sing 324 n n C5' HC5 THG sing 325 n n C11 N THG sing 326 n n C11 O11 THG doub 327 n n N CA THG sing 328 n n N HN THG sing 329 n n CA C THG sing 330 n n CA CB THG sing 331 n n CA HCA THG sing 332 n n C OX2 THG sing 333 n n C OX1 THG doub 334 n n OX2 HX2 THG sing 335 n n CB CG THG sing 336 n n CB HCB1 THG sing 337 n n CB HCB2 THG sing 338 n n CG CD THG sing 339 n n CG HCG1 THG sing 340 n n CG HCG2 THG sing 341 n n CD OE1 THG doub 342 n n CD OE2 THG sing 343 n n OE2 HE2 THG sing 344 n n N2 HN21 THG sing 345 n n N2 HN22 THG sing 346 n n # _atom_sites.entry_id 1WOO _atom_sites.fract_transf_matrix[1][1] 0.019048 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018538 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006693 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 THG A 1 2887 2887 THG THG . C 3 HOH A 1 2888 2888 HOH HOH . C 3 HOH A 2 2889 2889 HOH HOH . C 3 HOH A 3 2890 2890 HOH HOH . C 3 HOH A 4 2891 2891 HOH HOH . C 3 HOH A 5 2892 2892 HOH HOH . C 3 HOH A 6 2893 2893 HOH HOH . C 3 HOH A 7 2894 2894 HOH HOH . C 3 HOH A 8 2895 2895 HOH HOH . C 3 HOH A 9 2896 2896 HOH HOH . C 3 HOH A 10 2897 2897 HOH HOH . C 3 HOH A 11 2898 2898 HOH HOH . C 3 HOH A 12 2899 2899 HOH HOH . C 3 HOH A 13 2900 2900 HOH HOH . C 3 HOH A 14 2901 2901 HOH HOH . C 3 HOH A 15 2902 2902 HOH HOH . C 3 HOH A 16 2903 2903 HOH HOH . C 3 HOH A 17 2904 2904 HOH HOH . C 3 HOH A 18 2905 2905 HOH HOH . C 3 HOH A 19 2906 2906 HOH HOH . C 3 HOH A 20 2907 2907 HOH HOH . C 3 HOH A 21 2908 2908 HOH HOH . C 3 HOH A 22 2909 2909 HOH HOH . C 3 HOH A 23 2910 2910 HOH HOH . C 3 HOH A 24 2911 2911 HOH HOH . C 3 HOH A 25 2912 2912 HOH HOH . C 3 HOH A 26 2913 2913 HOH HOH . C 3 HOH A 27 2914 2914 HOH HOH . C 3 HOH A 28 2915 2915 HOH HOH . C 3 HOH A 29 2916 2916 HOH HOH . C 3 HOH A 30 2917 2917 HOH HOH . C 3 HOH A 31 2918 2918 HOH HOH . C 3 HOH A 32 2919 2919 HOH HOH . C 3 HOH A 33 2920 2920 HOH HOH . C 3 HOH A 34 2921 2921 HOH HOH . C 3 HOH A 35 2922 2922 HOH HOH . C 3 HOH A 36 2923 2923 HOH HOH . C 3 HOH A 37 2924 2924 HOH HOH . C 3 HOH A 38 2925 2925 HOH HOH . C 3 HOH A 39 2926 2926 HOH HOH . C 3 HOH A 40 2927 2927 HOH HOH . C 3 HOH A 41 2928 2928 HOH HOH . C 3 HOH A 42 2929 2929 HOH HOH . C 3 HOH A 43 2930 2930 HOH HOH . C 3 HOH A 44 2931 2931 HOH HOH . C 3 HOH A 45 2932 2932 HOH HOH . C 3 HOH A 46 2933 2933 HOH HOH . C 3 HOH A 47 2934 2934 HOH HOH . C 3 HOH A 48 2935 2935 HOH HOH . C 3 HOH A 49 2936 2936 HOH HOH . C 3 HOH A 50 2937 2937 HOH HOH . C 3 HOH A 51 2938 2938 HOH HOH . C 3 HOH A 52 2939 2939 HOH HOH . C 3 HOH A 53 2940 2940 HOH HOH . C 3 HOH A 54 2941 2941 HOH HOH . C 3 HOH A 55 2942 2942 HOH HOH . C 3 HOH A 56 2943 2943 HOH HOH . C 3 HOH A 57 2944 2944 HOH HOH . C 3 HOH A 58 2945 2945 HOH HOH . C 3 HOH A 59 2946 2946 HOH HOH . C 3 HOH A 60 2947 2947 HOH HOH . C 3 HOH A 61 2948 2948 HOH HOH . C 3 HOH A 62 2949 2949 HOH HOH . C 3 HOH A 63 2950 2950 HOH HOH . C 3 HOH A 64 2951 2951 HOH HOH . C 3 HOH A 65 2952 2952 HOH HOH . C 3 HOH A 66 2953 2953 HOH HOH . C 3 HOH A 67 2954 2954 HOH HOH . C 3 HOH A 68 2955 2955 HOH HOH . C 3 HOH A 69 2956 2956 HOH HOH . C 3 HOH A 70 2957 2957 HOH HOH . C 3 HOH A 71 2958 2958 HOH HOH . C 3 HOH A 72 2959 2959 HOH HOH . C 3 HOH A 73 2960 2960 HOH HOH . C 3 HOH A 74 2961 2961 HOH HOH . C 3 HOH A 75 2962 2962 HOH HOH . C 3 HOH A 76 2963 2963 HOH HOH . C 3 HOH A 77 2964 2964 HOH HOH . C 3 HOH A 78 2965 2965 HOH HOH . C 3 HOH A 79 2966 2966 HOH HOH . C 3 HOH A 80 2967 2967 HOH HOH . C 3 HOH A 81 2968 2968 HOH HOH . C 3 HOH A 82 2969 2969 HOH HOH . C 3 HOH A 83 2970 2970 HOH HOH . C 3 HOH A 84 2971 2971 HOH HOH . C 3 HOH A 85 2972 2972 HOH HOH . C 3 HOH A 86 2973 2973 HOH HOH . C 3 HOH A 87 2974 2974 HOH HOH . C 3 HOH A 88 2975 2975 HOH HOH . C 3 HOH A 89 2976 2976 HOH HOH . C 3 HOH A 90 2977 2977 HOH HOH . C 3 HOH A 91 2978 2978 HOH HOH . C 3 HOH A 92 2979 2979 HOH HOH . C 3 HOH A 93 2980 2980 HOH HOH . C 3 HOH A 94 2981 2981 HOH HOH . C 3 HOH A 95 2982 2982 HOH HOH . C 3 HOH A 96 2983 2983 HOH HOH . C 3 HOH A 97 2984 2984 HOH HOH . C 3 HOH A 98 2985 2985 HOH HOH . C 3 HOH A 99 2986 2986 HOH HOH . C 3 HOH A 100 2987 2987 HOH HOH . C 3 HOH A 101 2988 2988 HOH HOH . C 3 HOH A 102 2989 2989 HOH HOH . C 3 HOH A 103 2990 2990 HOH HOH . C 3 HOH A 104 2991 2991 HOH HOH . C 3 HOH A 105 2992 2992 HOH HOH . C 3 HOH A 106 2993 2993 HOH HOH . C 3 HOH A 107 2994 2994 HOH HOH . C 3 HOH A 108 2995 2995 HOH HOH . C 3 HOH A 109 2996 2996 HOH HOH . C 3 HOH A 110 2997 2997 HOH HOH . C 3 HOH A 111 2998 2998 HOH HOH . C 3 HOH A 112 2999 2999 HOH HOH . C 3 HOH A 113 3000 3000 HOH HOH . C 3 HOH A 114 3001 3001 HOH HOH . C 3 HOH A 115 3002 3002 HOH HOH . C 3 HOH A 116 3003 3003 HOH HOH . C 3 HOH A 117 3004 3004 HOH HOH . C 3 HOH A 118 3005 3005 HOH HOH . C 3 HOH A 119 3006 3006 HOH HOH . C 3 HOH A 120 3007 3007 HOH HOH . C 3 HOH A 121 3008 3008 HOH HOH . C 3 HOH A 122 3009 3009 HOH HOH . C 3 HOH A 123 3010 3010 HOH HOH . C 3 HOH A 124 3011 3011 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N3 THG . . . B 2 4.985 27.768 11.913 1 24.57 ? N3 THG 2887 A 1 HETATM 2 C C2 THG . . . B 2 4.39 27.365 10.718 1 22.88 ? C2 THG 2887 A 1 HETATM 3 N N1 THG . . . B 2 3.695 26.195 10.628 1 24.13 ? N1 THG 2887 A 1 HETATM 4 C C8A THG . . . B 2 3.559 25.343 11.7 1 27.02 ? C8A THG 2887 A 1 HETATM 5 C C4A THG . . . B 2 4.148 25.676 13.033 1 25.53 ? C4A THG 2887 A 1 HETATM 6 C C4 THG . . . B 2 4.917 26.995 13.07 1 25.62 ? C4 THG 2887 A 1 HETATM 7 N N8 THG . . . B 2 2.854 24.138 11.627 1 26.12 ? N8 THG 2887 A 1 HETATM 8 C C7 THG . . . B 2 2.617 23.119 12.684 1 27.26 ? C7 THG 2887 A 1 HETATM 9 C C6 THG . . . B 2 2.755 23.726 14.116 1 27.26 ? C6 THG 2887 A 1 HETATM 10 N N5 THG . . . B 2 3.926 24.682 14.111 1 25.49 ? N5 THG 2887 A 1 HETATM 11 C C9 THG . . . B 2 1.433 24.44 14.452 1 24.36 ? C9 THG 2887 A 1 HETATM 12 N N10 THG . . . B 2 1.418 25.102 15.753 1 28.73 ? N10 THG 2887 A 1 HETATM 13 C C4' THG . . . B 2 0.935 26.373 15.85 1 23.86 ? C4' THG 2887 A 1 HETATM 14 C C3' THG . . . B 2 -0.002 26.716 16.911 1 25.62 ? C3' THG 2887 A 1 HETATM 15 C C2' THG . . . B 2 -0.534 28.071 17.011 1 23.45 ? C2' THG 2887 A 1 HETATM 16 C C1' THG . . . B 2 -0.119 29.059 16.046 1 26.6 ? C1' THG 2887 A 1 HETATM 17 C C6' THG . . . B 2 0.816 28.7 15.005 1 26.91 ? C6' THG 2887 A 1 HETATM 18 C C5' THG . . . B 2 1.336 27.392 14.902 1 23.33 ? C5' THG 2887 A 1 HETATM 19 C C11 THG . . . B 2 -0.615 30.492 16.035 1 28.61 ? C11 THG 2887 A 1 HETATM 20 N N THG . . . B 2 -1.81 30.758 16.655 1 30.85 ? N THG 2887 A 1 HETATM 21 C CA THG . . . B 2 -2.436 32.079 16.715 1 34.92 ? CA THG 2887 A 1 HETATM 22 C C THG . . . B 2 -3.375 32.088 17.915 1 36 ? C THG 2887 A 1 HETATM 23 O OX2 THG . . . B 2 -3.63 33.11 18.549 1 35.01 ? OX2 THG 2887 A 1 HETATM 24 O OX1 THG . . . B 2 -3.944 30.943 18.29 1 37.13 ? OX1 THG 2887 A 1 HETATM 25 C CB THG . . . B 2 -3.162 32.178 15.359 1 35.42 ? CB THG 2887 A 1 HETATM 26 C CG THG . . . B 2 -3.907 33.485 15.129 1 39.23 ? CG THG 2887 A 1 HETATM 27 C CD THG . . . B 2 -4.616 33.57 13.782 1 35.22 ? CD THG 2887 A 1 HETATM 28 O OE1 THG . . . B 2 -5.233 34.601 13.537 1 39.58 ? OE1 THG 2887 A 1 HETATM 29 O OE2 THG . . . B 2 -4.588 32.583 12.871 1 30.22 ? OE2 THG 2887 A 1 HETATM 30 O O11 THG . . . B 2 0.016 31.393 15.473 1 31 ? O11 THG 2887 A 1 HETATM 31 O O4 THG . . . B 2 5.46 27.365 14.149 1 27.52 ? O4 THG 2887 A 1 HETATM 32 N N2 THG . . . B 2 4.454 28.119 9.569 1 21.34 ? N2 THG 2887 A 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 32 #