data_1WP9 # _model_server_result.job_id jcdwmBzlWYe-4lrkjt5v2Q _model_server_result.datetime_utc '2024-12-26 23:34:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1wp9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":495}' # _entry.id 1WP9 # _exptl.entry_id 1WP9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 114.85 _cell.angle_gamma 90 _cell.entry_id 1WP9 _cell.length_a 118.498 _cell.length_b 165.94 _cell.length_c 119.157 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1WP9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 ? monomeric 1 author_defined_assembly 5 ? monomeric 1 author_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,G,M 1 1 B,H,N 2 1 C,I,O 3 1 D,J,P 4 1 E,K,Q 5 1 F,L,R 6 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 1WP9 _atom_sites.fract_transf_matrix[1][1] 0.008439 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003908 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006026 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009249 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 PO4 A 1 495 406 PO4 PO4 . H 2 PO4 B 1 495 401 PO4 PO4 . I 2 PO4 C 1 495 403 PO4 PO4 . J 2 PO4 D 1 495 404 PO4 PO4 . K 2 PO4 E 1 495 405 PO4 PO4 . L 2 PO4 F 1 495 402 PO4 PO4 . M 3 HOH A 1 496 8 HOH HOH . M 3 HOH A 2 497 18 HOH HOH . M 3 HOH A 3 498 19 HOH HOH . M 3 HOH A 4 499 42 HOH HOH . N 3 HOH B 1 496 1 HOH HOH . N 3 HOH B 2 497 3 HOH HOH . N 3 HOH B 3 498 7 HOH HOH . N 3 HOH B 4 499 12 HOH HOH . N 3 HOH B 5 500 13 HOH HOH . N 3 HOH B 6 501 20 HOH HOH . N 3 HOH B 7 502 21 HOH HOH . N 3 HOH B 8 503 22 HOH HOH . N 3 HOH B 9 504 23 HOH HOH . N 3 HOH B 10 505 24 HOH HOH . N 3 HOH B 11 506 25 HOH HOH . N 3 HOH B 12 507 26 HOH HOH . N 3 HOH B 13 508 27 HOH HOH . O 3 HOH C 1 496 4 HOH HOH . O 3 HOH C 2 497 10 HOH HOH . O 3 HOH C 3 498 17 HOH HOH . O 3 HOH C 4 499 28 HOH HOH . O 3 HOH C 5 500 29 HOH HOH . O 3 HOH C 6 501 30 HOH HOH . O 3 HOH C 7 502 31 HOH HOH . O 3 HOH C 8 503 48 HOH HOH . P 3 HOH D 1 496 2 HOH HOH . P 3 HOH D 2 497 11 HOH HOH . P 3 HOH D 3 498 32 HOH HOH . P 3 HOH D 4 499 34 HOH HOH . P 3 HOH D 5 500 35 HOH HOH . P 3 HOH D 6 501 36 HOH HOH . P 3 HOH D 7 502 37 HOH HOH . Q 3 HOH E 1 496 5 HOH HOH . Q 3 HOH E 2 497 9 HOH HOH . Q 3 HOH E 3 498 14 HOH HOH . Q 3 HOH E 4 499 16 HOH HOH . Q 3 HOH E 5 500 33 HOH HOH . Q 3 HOH E 6 501 38 HOH HOH . Q 3 HOH E 7 502 39 HOH HOH . Q 3 HOH E 8 503 40 HOH HOH . Q 3 HOH E 9 504 41 HOH HOH . Q 3 HOH E 10 505 43 HOH HOH . Q 3 HOH E 11 506 44 HOH HOH . Q 3 HOH E 12 507 45 HOH HOH . Q 3 HOH E 13 508 49 HOH HOH . R 3 HOH F 1 496 6 HOH HOH . R 3 HOH F 2 497 15 HOH HOH . R 3 HOH F 3 498 46 HOH HOH . R 3 HOH F 4 499 47 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . J 2 75.195 48.033 93.376 1 125.49 ? P PO4 495 D 1 HETATM 2 O O1 PO4 . . . J 2 76.474 48.699 93.752 1 125.22 ? O1 PO4 495 D 1 HETATM 3 O O2 PO4 . . . J 2 74.09 49.027 93.396 1 124.85 ? O2 PO4 495 D 1 HETATM 4 O O3 PO4 . . . J 2 74.895 46.946 94.343 1 125.75 ? O3 PO4 495 D 1 HETATM 5 O O4 PO4 . . . J 2 75.321 47.459 92.01 1 126.08 ? O4 PO4 495 D 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #