data_1WRP # _model_server_result.job_id BXs99vaqw3bztzFQebVWtQ _model_server_result.datetime_utc '2025-01-10 22:11:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1wrp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 1WRP # _exptl.entry_id 1WRP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 204.225 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRYPTOPHAN _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1WRP _cell.length_a 50.6 _cell.length_b 50.6 _cell.length_c 73.6 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1WRP _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 x-y,-y,-z+1/3 1 0 0 0 -1 0 0 0 -1 0 0 24.533333 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C11 H12 N2 O2' _chem_comp.formula_weight 204.225 _chem_comp.id TRP _chem_comp.mon_nstd_flag y _chem_comp.name TRYPTOPHAN _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA TRP sing 293 n n N H TRP sing 294 n n N H2 TRP sing 295 n n CA C TRP sing 296 n n CA CB TRP sing 297 n n CA HA TRP sing 298 n n C O TRP doub 299 n n C OXT TRP sing 300 n n CB CG TRP sing 301 n n CB HB2 TRP sing 302 n n CB HB3 TRP sing 303 n n CG CD1 TRP doub 304 n y CG CD2 TRP sing 305 n y CD1 NE1 TRP sing 306 n y CD1 HD1 TRP sing 307 n n CD2 CE2 TRP doub 308 n y CD2 CE3 TRP sing 309 n y NE1 CE2 TRP sing 310 n y NE1 HE1 TRP sing 311 n n CE2 CZ2 TRP sing 312 n y CE3 CZ3 TRP doub 313 n y CE3 HE3 TRP sing 314 n n CZ2 CH2 TRP doub 315 n y CZ2 HZ2 TRP sing 316 n n CZ3 CH2 TRP sing 317 n y CZ3 HZ3 TRP sing 318 n n CH2 HH2 TRP sing 319 n n OXT HXT TRP sing 320 n n # _atom_sites.entry_id 1WRP _atom_sites.fract_transf_matrix[1][1] 0.019763 _atom_sites.fract_transf_matrix[1][2] 0.01141 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02282 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013587 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TRP R 1 1 1 TRP TRP . C 3 HOH R 1 111 111 HOH HOH . C 3 HOH R 2 112 112 HOH HOH . C 3 HOH R 3 113 113 HOH HOH . C 3 HOH R 4 114 114 HOH HOH . C 3 HOH R 5 115 115 HOH HOH . C 3 HOH R 6 116 116 HOH HOH . C 3 HOH R 7 117 117 HOH HOH . C 3 HOH R 8 118 118 HOH HOH . C 3 HOH R 9 119 119 HOH HOH . C 3 HOH R 10 120 120 HOH HOH . C 3 HOH R 11 121 121 HOH HOH . C 3 HOH R 12 122 122 HOH HOH . C 3 HOH R 13 123 123 HOH HOH . C 3 HOH R 14 124 124 HOH HOH . C 3 HOH R 15 125 125 HOH HOH . C 3 HOH R 16 126 126 HOH HOH . C 3 HOH R 17 127 127 HOH HOH . C 3 HOH R 18 128 128 HOH HOH . C 3 HOH R 19 129 129 HOH HOH . C 3 HOH R 20 130 130 HOH HOH . C 3 HOH R 21 131 131 HOH HOH . C 3 HOH R 22 132 132 HOH HOH . C 3 HOH R 23 133 133 HOH HOH . C 3 HOH R 24 134 134 HOH HOH . C 3 HOH R 25 135 135 HOH HOH . C 3 HOH R 26 136 136 HOH HOH . C 3 HOH R 27 137 137 HOH HOH . C 3 HOH R 28 138 138 HOH HOH . C 3 HOH R 29 139 139 HOH HOH . C 3 HOH R 30 140 140 HOH HOH . C 3 HOH R 31 141 141 HOH HOH . C 3 HOH R 32 142 142 HOH HOH . C 3 HOH R 33 143 143 HOH HOH . C 3 HOH R 34 144 144 HOH HOH . C 3 HOH R 35 145 145 HOH HOH . C 3 HOH R 36 146 146 HOH HOH . C 3 HOH R 37 147 147 HOH HOH . C 3 HOH R 38 148 148 HOH HOH . C 3 HOH R 39 149 149 HOH HOH . C 3 HOH R 40 150 150 HOH HOH . C 3 HOH R 41 151 151 HOH HOH . C 3 HOH R 42 152 152 HOH HOH . C 3 HOH R 43 153 153 HOH HOH . C 3 HOH R 44 154 154 HOH HOH . C 3 HOH R 45 155 155 HOH HOH . C 3 HOH R 46 156 156 HOH HOH . C 3 HOH R 47 157 157 HOH HOH . C 3 HOH R 48 158 158 HOH HOH . C 3 HOH R 49 159 159 HOH HOH . C 3 HOH R 50 160 160 HOH HOH . C 3 HOH R 51 161 161 HOH HOH . C 3 HOH R 52 162 162 HOH HOH . C 3 HOH R 53 163 163 HOH HOH . C 3 HOH R 54 164 164 HOH HOH . C 3 HOH R 55 165 165 HOH HOH . C 3 HOH R 56 166 166 HOH HOH . C 3 HOH R 57 167 167 HOH HOH . C 3 HOH R 58 168 168 HOH HOH . C 3 HOH R 59 169 169 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N TRP . . . B 2 29.938 9.591 16.058 1 6.06 ? N TRP 1 R 1 HETATM 2 C CA TRP . . . B 2 28.748 9.862 15.255 1 6.1 ? CA TRP 1 R 1 HETATM 3 C C TRP . . . B 2 27.483 9.912 16.174 1 5.85 ? C TRP 1 R 1 HETATM 4 O O TRP . . . B 2 27.686 9.197 17.2 1 5.73 ? O TRP 1 R 1 HETATM 5 C CB TRP . . . B 2 28.543 8.715 14.228 1 6.17 ? CB TRP 1 R 1 HETATM 6 C CG TRP . . . B 2 27.848 9.252 13.012 1 6.5 ? CG TRP 1 R 1 HETATM 7 C CD1 TRP . . . B 2 26.533 9.135 12.671 1 6.41 ? CD1 TRP 1 R 1 HETATM 8 C CD2 TRP . . . B 2 28.41 10.225 12.116 1 6.6 ? CD2 TRP 1 R 1 HETATM 9 N NE1 TRP . . . B 2 26.281 9.823 11.511 1 6.44 ? NE1 TRP 1 R 1 HETATM 10 C CE2 TRP . . . B 2 27.406 10.503 11.15 1 6.77 ? CE2 TRP 1 R 1 HETATM 11 C CE3 TRP . . . B 2 29.676 10.773 11.961 1 6.75 ? CE3 TRP 1 R 1 HETATM 12 C CZ2 TRP . . . B 2 27.624 11.394 10.101 1 6.75 ? CZ2 TRP 1 R 1 HETATM 13 C CZ3 TRP . . . B 2 29.896 11.629 10.904 1 6.9 ? CZ3 TRP 1 R 1 HETATM 14 C CH2 TRP . . . B 2 28.887 11.95 10.003 1 6.71 ? CH2 TRP 1 R 1 HETATM 15 O OXT TRP . . . B 2 26.486 10.213 15.906 1 7.67 ? OXT TRP 1 R 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 250 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 15 #