data_1WRZ # _model_server_result.job_id m1fGbTzjDAzNDpLZW6U3cQ _model_server_result.datetime_utc '2024-12-26 21:30:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1wrz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":153}' # _entry.id 1WRZ # _exptl.entry_id 1WRZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.04 _cell.angle_gamma 90 _cell.entry_id 1WRZ _cell.length_a 66.07 _cell.length_b 33.76 _cell.length_c 73.87 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1WRZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 21 A ASP 20 1_555 C CA CA . A CA 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc2 A OD2 ASP 23 A ASP 22 1_555 C CA CA . A CA 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc3 A OD1 ASP 25 A ASP 24 1_555 C CA CA . A CA 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.428 ? metalc ? metalc4 A O THR 27 A THR 26 1_555 C CA CA . A CA 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? metalc ? metalc5 A OE1 GLU 32 A GLU 31 1_555 C CA CA . A CA 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc6 A OE2 GLU 32 A GLU 31 1_555 C CA CA . A CA 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? metalc ? metalc7 A OD1 ASP 57 A ASP 56 1_555 D CA CA . A CA 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? metalc ? metalc8 A OD1 ASP 59 A ASP 58 1_555 D CA CA . A CA 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? metalc ? metalc9 A OD1 ASN 61 A ASN 60 1_555 D CA CA . A CA 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc10 A O THR 63 A THR 62 1_555 D CA CA . A CA 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc11 A OE1 GLU 68 A GLU 67 1_555 D CA CA . A CA 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.634 ? metalc ? metalc12 A OE2 GLU 68 A GLU 67 1_555 D CA CA . A CA 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc13 A OD2 ASP 94 A ASP 93 1_555 E CA CA . A CA 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc14 A OD1 ASP 96 A ASP 95 1_555 E CA CA . A CA 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.526 ? metalc ? metalc15 A OD1 ASN 98 A ASN 97 1_555 E CA CA . A CA 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc16 A O TYR 100 A TYR 99 1_555 E CA CA . A CA 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc17 A OE1 GLU 105 A GLU 104 1_555 E CA CA . A CA 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.74 ? metalc ? metalc18 A OE2 GLU 105 A GLU 104 1_555 E CA CA . A CA 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc19 A OD1 ASP 130 A ASP 129 1_555 F CA CA . A CA 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc20 A OD2 ASP 132 A ASP 131 1_555 F CA CA . A CA 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? metalc ? metalc21 A OD2 ASP 134 A ASP 133 1_555 F CA CA . A CA 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? metalc ? metalc22 A O GLN 136 A GLN 135 1_555 F CA CA . A CA 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc23 A OE1 GLU 141 A GLU 140 1_555 F CA CA . A CA 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.963 ? metalc ? metalc24 A OE2 GLU 141 A GLU 140 1_555 F CA CA . A CA 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.867 ? metalc ? metalc25 C CA CA . A CA 151 1_555 G O HOH . A HOH 5011 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc26 D CA CA . A CA 152 1_555 G O HOH . A HOH 5012 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc27 E CA CA . A CA 153 1_555 G O HOH . A HOH 5013 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc28 F CA CA . A CA 154 1_555 G O HOH . A HOH 5014 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1WRZ _atom_sites.fract_transf_matrix[1][1] 0.015135 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005521 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.029621 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01441 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA A 1 151 151 CA OC1 . D 3 CA A 1 152 152 CA OC1 . E 3 CA A 1 153 153 CA OC1 . F 3 CA A 1 154 154 CA OC1 . G 4 HOH A 1 5011 151 HOH OC1 . G 4 HOH A 2 5012 152 HOH OC1 . G 4 HOH A 3 5013 153 HOH OC1 . G 4 HOH A 4 5014 154 HOH OC1 . G 4 HOH A 5 5015 1 HOH HOH . G 4 HOH A 6 5016 2 HOH HOH . G 4 HOH A 7 5017 3 HOH HOH . G 4 HOH A 8 5018 4 HOH HOH . G 4 HOH A 9 5019 5 HOH HOH . G 4 HOH A 10 5020 7 HOH HOH . G 4 HOH A 11 5021 8 HOH HOH . G 4 HOH A 12 5022 9 HOH HOH . G 4 HOH A 13 5023 10 HOH HOH . G 4 HOH A 14 5024 11 HOH HOH . G 4 HOH A 15 5025 12 HOH HOH . G 4 HOH A 16 5026 14 HOH HOH . G 4 HOH A 17 5027 15 HOH HOH . G 4 HOH A 18 5028 17 HOH HOH . G 4 HOH A 19 5029 18 HOH HOH . G 4 HOH A 20 5030 19 HOH HOH . G 4 HOH A 21 5031 20 HOH HOH . G 4 HOH A 22 5032 21 HOH HOH . G 4 HOH A 23 5033 22 HOH HOH . G 4 HOH A 24 5034 23 HOH HOH . G 4 HOH A 25 5035 24 HOH HOH . G 4 HOH A 26 5036 25 HOH HOH . G 4 HOH A 27 5037 26 HOH HOH . G 4 HOH A 28 5038 27 HOH HOH . G 4 HOH A 29 5039 28 HOH HOH . G 4 HOH A 30 5040 29 HOH HOH . G 4 HOH A 31 5041 30 HOH HOH . G 4 HOH A 32 5042 31 HOH HOH . G 4 HOH A 33 5043 32 HOH HOH . G 4 HOH A 34 5044 33 HOH HOH . G 4 HOH A 35 5045 34 HOH HOH . G 4 HOH A 36 5046 35 HOH HOH . G 4 HOH A 37 5047 36 HOH HOH . G 4 HOH A 38 5048 37 HOH HOH . G 4 HOH A 39 5049 39 HOH HOH . G 4 HOH A 40 5050 40 HOH HOH . G 4 HOH A 41 5051 41 HOH HOH . G 4 HOH A 42 5052 42 HOH HOH . G 4 HOH A 43 5053 43 HOH HOH . G 4 HOH A 44 5054 44 HOH HOH . G 4 HOH A 45 5055 46 HOH HOH . G 4 HOH A 46 5056 47 HOH HOH . G 4 HOH A 47 5057 48 HOH HOH . G 4 HOH A 48 5058 50 HOH HOH . G 4 HOH A 49 5059 51 HOH HOH . G 4 HOH A 50 5060 52 HOH HOH . G 4 HOH A 51 5061 53 HOH HOH . G 4 HOH A 52 5062 54 HOH HOH . G 4 HOH A 53 5063 55 HOH HOH . G 4 HOH A 54 5064 56 HOH HOH . G 4 HOH A 55 5065 57 HOH HOH . G 4 HOH A 56 5066 58 HOH HOH . G 4 HOH A 57 5067 59 HOH HOH . G 4 HOH A 58 5068 61 HOH HOH . G 4 HOH A 59 5069 62 HOH HOH . G 4 HOH A 60 5070 64 HOH HOH . G 4 HOH A 61 5071 65 HOH HOH . G 4 HOH A 62 5072 66 HOH HOH . G 4 HOH A 63 5073 69 HOH HOH . G 4 HOH A 64 5074 70 HOH HOH . G 4 HOH A 65 5075 74 HOH HOH . G 4 HOH A 66 5076 75 HOH HOH . G 4 HOH A 67 5077 76 HOH HOH . G 4 HOH A 68 5078 77 HOH HOH . G 4 HOH A 69 5079 78 HOH HOH . G 4 HOH A 70 5080 79 HOH HOH . G 4 HOH A 71 5081 81 HOH HOH . G 4 HOH A 72 5082 82 HOH HOH . G 4 HOH A 73 5083 83 HOH HOH . G 4 HOH A 74 5084 102 HOH HOH . G 4 HOH A 75 5085 103 HOH HOH . G 4 HOH A 76 5086 104 HOH HOH . G 4 HOH A 77 5087 105 HOH HOH . G 4 HOH A 78 5088 106 HOH HOH . G 4 HOH A 79 5089 107 HOH HOH . G 4 HOH A 80 5090 108 HOH HOH . G 4 HOH A 81 5091 109 HOH HOH . G 4 HOH A 82 5092 111 HOH HOH . G 4 HOH A 83 5093 112 HOH HOH . G 4 HOH A 84 5094 113 HOH HOH . G 4 HOH A 85 5095 114 HOH HOH . G 4 HOH A 86 5096 115 HOH HOH . G 4 HOH A 87 5097 117 HOH HOH . H 4 HOH B 1 84 84 HOH HOH . H 4 HOH B 2 110 110 HOH HOH . H 4 HOH B 3 118 118 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 10.793 _atom_site.Cartn_y 1.664 _atom_site.Cartn_z 1.685 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 40.47 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 153 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 21 _model_server_stats.element_count 1 #