data_1WY4 # _model_server_result.job_id PePjUXCk-CQxL3iXGMDLHw _model_server_result.datetime_utc '2024-10-14 07:28:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1wy4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":99}' # _entry.id 1WY4 # _exptl.entry_id 1WY4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1WY4 _cell.length_a 19.72 _cell.length_b 40.225 _cell.length_c 75.379 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1WY4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C TRP 23 A TRP 64 1_555 A N NLE 24 A NLE 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? covale ? covale2 A C NLE 24 A NLE 65 1_555 A N GLN 25 A GLN 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? metalc ? metalc1 C I IOD . A IOD 99 1_555 D NA NA . A NA 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? metalc ? metalc2 D NA NA . A NA 100 1_555 E O HOH . A HOH 1007 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1WY4 _atom_sites.fract_transf_matrix[1][1] 0.05071 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02486 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013266 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IOD A 1 98 98 IOD I . C 2 IOD A 1 99 99 IOD I . D 3 NA A 1 100 99 NA I . E 4 HOH A 1 1001 1001 HOH HOH . E 4 HOH A 2 1002 1002 HOH HOH . E 4 HOH A 3 1003 1003 HOH HOH . E 4 HOH A 4 1004 1004 HOH HOH . E 4 HOH A 5 1005 1005 HOH HOH . E 4 HOH A 6 1006 1006 HOH HOH . E 4 HOH A 7 1007 1007 HOH HOH . E 4 HOH A 8 1008 1008 HOH HOH . E 4 HOH A 9 1009 1009 HOH HOH . E 4 HOH A 10 1010 1010 HOH HOH . E 4 HOH A 11 1011 1011 HOH HOH . E 4 HOH A 12 1012 1012 HOH HOH . E 4 HOH A 13 1013 1013 HOH HOH . E 4 HOH A 14 1014 1014 HOH HOH . E 4 HOH A 15 1015 1015 HOH HOH . E 4 HOH A 16 1016 1016 HOH HOH . E 4 HOH A 17 1017 1017 HOH HOH . E 4 HOH A 18 1018 1018 HOH HOH . E 4 HOH A 19 1019 1019 HOH HOH . E 4 HOH A 20 1020 1020 HOH HOH . E 4 HOH A 21 1021 1021 HOH HOH . E 4 HOH A 22 1022 1022 HOH HOH . E 4 HOH A 23 1023 1023 HOH HOH . E 4 HOH A 24 1024 1024 HOH HOH . E 4 HOH A 25 1025 1025 HOH HOH . E 4 HOH A 26 1026 1026 HOH HOH . E 4 HOH A 27 1027 1027 HOH HOH . E 4 HOH A 28 1028 1028 HOH HOH . E 4 HOH A 29 1029 1029 HOH HOH . E 4 HOH A 30 1030 1030 HOH HOH . E 4 HOH A 31 1031 1031 HOH HOH . E 4 HOH A 32 1032 1032 HOH HOH . E 4 HOH A 33 1033 1033 HOH HOH . E 4 HOH A 34 1034 1034 HOH HOH . E 4 HOH A 35 1035 1035 HOH HOH . E 4 HOH A 36 1036 1036 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 19.2 _atom_site.Cartn_y -9.695 _atom_site.Cartn_z 67.012 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 12.63 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 99 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #