data_1WZ1
#
_model_server_result.job_id            4uYWPPFMafma8GqLn4_GWA 
_model_server_result.datetime_utc      '2025-03-06 04:02:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1wz1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":200}' 
#
_entry.id    1WZ1 
#
_exptl.entry_id    1WZ1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              379.474 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N~6~-{[5-(DIMETHYLAMINO)-1-NAPHTHYL]SULFONYL}-L-LYSINE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1WZ1 
_cell.length_a            81.63 
_cell.length_b            81.63 
_cell.length_c            74.47 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1WZ1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 23 L CYS 23 1_555 A SG CYS 93 L CYS 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf2 B SG CYS 22 H CYS 22 1_555 B SG CYS 98 H CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
#
_chem_comp.formula           'C18 H25 N3 O4 S' 
_chem_comp.formula_weight    379.474 
_chem_comp.id                DNS 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              N~6~-{[5-(DIMETHYLAMINO)-1-NAPHTHYL]SULFONYL}-L-LYSINE 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     DANSYLLYSINE;DNS-LYSINE;N(EPSILON)-DANSYL-L-LYSINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 N1 DNS sing 83 n n 
C1 H11A DNS sing 84 n n 
C1 H12 DNS sing 85 n n 
C1 H13 DNS sing 86 n n 
N1 C2 DNS sing 87 n n 
N1 C3 DNS sing 88 n n 
C2 H21 DNS sing 89 n n 
C2 H22 DNS sing 90 n n 
C2 H23 DNS sing 91 n n 
C3 C4 DNS sing 92 n y 
C3 C12 DNS doub 93 n y 
C4 C5 DNS doub 94 n y 
C4 H4 DNS sing 95 n n 
C5 C6 DNS sing 96 n y 
C5 H5 DNS sing 97 n n 
C6 C7 DNS doub 98 n y 
C6 H6 DNS sing 99 n n 
C7 C8 DNS sing 100 n y 
C7 C12 DNS sing 101 n y 
C8 S DNS sing 102 n n 
C8 C9 DNS doub 103 n y 
S OA DNS doub 104 n n 
S OB DNS doub 105 n n 
S NZ DNS sing 106 n n 
NZ CE DNS sing 107 n n 
NZ HZ DNS sing 108 n n 
CE CD DNS sing 109 n n 
CE HE3 DNS sing 110 n n 
CE HE2 DNS sing 111 n n 
CD CG DNS sing 112 n n 
CD HD3 DNS sing 113 n n 
CD HD2 DNS sing 114 n n 
CG CB DNS sing 115 n n 
CG HG3 DNS sing 116 n n 
CG HG2 DNS sing 117 n n 
CB CA DNS sing 118 n n 
CB HB3 DNS sing 119 n n 
CB HB2 DNS sing 120 n n 
CA C DNS sing 121 n n 
CA N DNS sing 122 n n 
CA HA DNS sing 123 n n 
C OXT DNS sing 124 n n 
C O DNS doub 125 n n 
OXT HO DNS sing 126 n n 
N H DNS sing 127 n n 
N H2 DNS sing 128 n n 
C9 C10 DNS sing 129 n y 
C9 H9 DNS sing 130 n n 
C10 C11 DNS doub 131 n y 
C10 H10 DNS sing 132 n n 
C11 C12 DNS sing 133 n y 
C11 H11 DNS sing 134 n n 
#
_atom_sites.entry_id                     1WZ1 
_atom_sites.fract_transf_matrix[1][1]    0.01225 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01225 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013428 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          C 
_pdbx_nonpoly_scheme.entity_id        3 
_pdbx_nonpoly_scheme.mon_id           DNS 
_pdbx_nonpoly_scheme.pdb_strand_id    H 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      200 
_pdbx_nonpoly_scheme.auth_seq_num     200 
_pdbx_nonpoly_scheme.pdb_mon_id       DNS 
_pdbx_nonpoly_scheme.auth_mon_id      DNS 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 DNS . . . C 3 69.313 20.925 -39.152 1 20.52 ? C1 DNS 200 H 1 
HETATM 2 N N1 DNS . . . C 3 68.848 19.893 -40.093 1 17.72 ? N1 DNS 200 H 1 
HETATM 3 C C2 DNS . . . C 3 68.691 19.912 -41.571 1 16.75 ? C2 DNS 200 H 1 
HETATM 4 C C3 DNS . . . C 3 69.308 18.58 -39.675 1 18.09 ? C3 DNS 200 H 1 
HETATM 5 C C4 DNS . . . C 3 70.524 18.415 -38.943 1 17.94 ? C4 DNS 200 H 1 
HETATM 6 C C5 DNS . . . C 3 70.979 17.143 -38.522 1 21.29 ? C5 DNS 200 H 1 
HETATM 7 C C6 DNS . . . C 3 70.253 16 -38.793 1 18.45 ? C6 DNS 200 H 1 
HETATM 8 C C7 DNS . . . C 3 69.017 16.071 -39.519 1 17.91 ? C7 DNS 200 H 1 
HETATM 9 C C8 DNS . . . C 3 68.232 14.894 -39.806 1 17.49 ? C8 DNS 200 H 1 
HETATM 10 S S DNS . . . C 3 68.749 13.299 -39.26 1 20.25 ? S DNS 200 H 1 
HETATM 11 O OA DNS . . . C 3 69.029 13.426 -37.887 1 20.87 ? OA DNS 200 H 1 
HETATM 12 O OB DNS . . . C 3 67.709 12.445 -39.743 1 18.8 ? OB DNS 200 H 1 
HETATM 13 N NZ DNS . . . C 3 70.18 12.95 -40.032 1 23.93 ? NZ DNS 200 H 1 
HETATM 14 C CE DNS . . . C 3 70.289 11.916 -41.07 1 24.5 ? CE DNS 200 H 1 
HETATM 15 C CD DNS . . . C 3 71.362 12.281 -42.133 1 24.77 ? CD DNS 200 H 1 
HETATM 16 C CG DNS . . . C 3 72.041 13.633 -41.844 1 25.81 ? CG DNS 200 H 1 
HETATM 17 C CB DNS . . . C 3 73.496 13.621 -42.364 1 25.15 ? CB DNS 200 H 1 
HETATM 18 C CA DNS . . . C 3 73.981 15.07 -42.61 1 25.55 ? CA DNS 200 H 1 
HETATM 19 C C DNS . . . C 3 74.682 15.626 -41.388 1 24.74 ? C DNS 200 H 1 
HETATM 20 O OXT DNS . . . C 3 75.622 16.375 -41.511 1 24.22 ? OXT DNS 200 H 1 
HETATM 21 O O DNS . . . C 3 74.265 15.297 -40.16 1 26.49 ? O DNS 200 H 1 
HETATM 22 N N DNS . . . C 3 74.919 15.095 -43.753 1 26.05 ? N DNS 200 H 1 
HETATM 23 C C9 DNS . . . C 3 67.039 15.019 -40.519 1 16.69 ? C9 DNS 200 H 1 
HETATM 24 C C10 DNS . . . C 3 66.573 16.271 -40.968 1 17.34 ? C10 DNS 200 H 1 
HETATM 25 C C11 DNS . . . C 3 67.286 17.427 -40.708 1 16.48 ? C11 DNS 200 H 1 
HETATM 26 C C12 DNS . . . C 3 68.528 17.377 -39.98 1 15.2 ? C12 DNS 200 H 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           26 
#