data_1X14 # _model_server_result.job_id EhbtylcsYA2JodNDPKN_CA _model_server_result.datetime_utc '2024-11-09 02:35:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1x14 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1395}' # _entry.id 1X14 # _exptl.entry_id 1X14 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 663.425 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE-ADENINE-DINUCLEOTIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 67.08 _cell.angle_beta 80.69 _cell.angle_gamma 80.99 _cell.entry_id 1X14 _cell.length_a 38.773 _cell.length_b 66.985 _cell.length_c 76.619 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1X14 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H27 N7 O14 P2' _chem_comp.formula_weight 663.425 _chem_comp.id NAD _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE-ADENINE-DINUCLEOTIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAD doub 237 n n PA O2A NAD sing 238 n n PA O5B NAD sing 239 n n PA O3 NAD sing 240 n n O2A HOA2 NAD sing 241 n n O5B C5B NAD sing 242 n n C5B C4B NAD sing 243 n n C5B H51A NAD sing 244 n n C5B H52A NAD sing 245 n n C4B O4B NAD sing 246 n n C4B C3B NAD sing 247 n n C4B H4B NAD sing 248 n n O4B C1B NAD sing 249 n n C3B O3B NAD sing 250 n n C3B C2B NAD sing 251 n n C3B H3B NAD sing 252 n n O3B HO3A NAD sing 253 n n C2B O2B NAD sing 254 n n C2B C1B NAD sing 255 n n C2B H2B NAD sing 256 n n O2B HO2A NAD sing 257 n n C1B N9A NAD sing 258 n n C1B H1B NAD sing 259 n n N9A C8A NAD sing 260 n y N9A C4A NAD sing 261 n y C8A N7A NAD doub 262 n y C8A H8A NAD sing 263 n n N7A C5A NAD sing 264 n y C5A C6A NAD sing 265 n y C5A C4A NAD doub 266 n y C6A N6A NAD sing 267 n n C6A N1A NAD doub 268 n y N6A H61A NAD sing 269 n n N6A H62A NAD sing 270 n n N1A C2A NAD sing 271 n y C2A N3A NAD doub 272 n y C2A H2A NAD sing 273 n n N3A C4A NAD sing 274 n y O3 PN NAD sing 275 n n PN O1N NAD doub 276 n n PN O2N NAD sing 277 n n PN O5D NAD sing 278 n n O5D C5D NAD sing 279 n n C5D C4D NAD sing 280 n n C5D H51N NAD sing 281 n n C5D H52N NAD sing 282 n n C4D O4D NAD sing 283 n n C4D C3D NAD sing 284 n n C4D H4D NAD sing 285 n n O4D C1D NAD sing 286 n n C3D O3D NAD sing 287 n n C3D C2D NAD sing 288 n n C3D H3D NAD sing 289 n n O3D HO3N NAD sing 290 n n C2D O2D NAD sing 291 n n C2D C1D NAD sing 292 n n C2D H2D NAD sing 293 n n O2D HO2N NAD sing 294 n n C1D N1N NAD sing 295 n n C1D H1D NAD sing 296 n n N1N C2N NAD sing 297 n y N1N C6N NAD doub 298 n y C2N C3N NAD doub 299 n y C2N H2N NAD sing 300 n n C3N C7N NAD sing 301 n n C3N C4N NAD sing 302 n y C7N O7N NAD doub 303 n n C7N N7N NAD sing 304 n n N7N H71N NAD sing 305 n n N7N H72N NAD sing 306 n n C4N C5N NAD doub 307 n y C4N H4N NAD sing 308 n n C5N C6N NAD sing 309 n y C5N H5N NAD sing 310 n n C6N H6N NAD sing 311 n n # _atom_sites.entry_id 1X14 _atom_sites.fract_transf_matrix[1][1] 0.025791 _atom_sites.fract_transf_matrix[1][2] -0.00409 _atom_sites.fract_transf_matrix[1][3] -0.00291 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015115 _atom_sites.fract_transf_matrix[2][3] -0.006086 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014258 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAD B 1 1395 2 NAD NAD . D 3 HOH A 1 5 5 HOH HOH . D 3 HOH A 2 9 9 HOH HOH . D 3 HOH A 3 18 18 HOH HOH . D 3 HOH A 4 19 19 HOH HOH . D 3 HOH A 5 21 21 HOH HOH . D 3 HOH A 6 24 24 HOH HOH . D 3 HOH A 7 30 30 HOH HOH . D 3 HOH A 8 31 31 HOH HOH . D 3 HOH A 9 33 33 HOH HOH . D 3 HOH A 10 34 34 HOH HOH . D 3 HOH A 11 37 37 HOH HOH . D 3 HOH A 12 42 42 HOH HOH . D 3 HOH A 13 43 43 HOH HOH . D 3 HOH A 14 45 45 HOH HOH . D 3 HOH A 15 46 46 HOH HOH . D 3 HOH A 16 47 47 HOH HOH . D 3 HOH A 17 48 48 HOH HOH . D 3 HOH A 18 52 52 HOH HOH . D 3 HOH A 19 55 55 HOH HOH . D 3 HOH A 20 56 56 HOH HOH . D 3 HOH A 21 59 59 HOH HOH . D 3 HOH A 22 60 60 HOH HOH . D 3 HOH A 23 65 65 HOH HOH . D 3 HOH A 24 67 67 HOH HOH . D 3 HOH A 25 69 69 HOH HOH . D 3 HOH A 26 72 72 HOH HOH . D 3 HOH A 27 76 76 HOH HOH . D 3 HOH A 28 77 77 HOH HOH . D 3 HOH A 29 83 83 HOH HOH . D 3 HOH A 30 87 87 HOH HOH . D 3 HOH A 31 88 88 HOH HOH . D 3 HOH A 32 91 91 HOH HOH . D 3 HOH A 33 92 92 HOH HOH . D 3 HOH A 34 96 96 HOH HOH . D 3 HOH A 35 98 98 HOH HOH . D 3 HOH A 36 100 100 HOH HOH . D 3 HOH A 37 103 103 HOH HOH . D 3 HOH A 38 104 104 HOH HOH . D 3 HOH A 39 105 105 HOH HOH . D 3 HOH A 40 108 108 HOH HOH . D 3 HOH A 41 110 110 HOH HOH . D 3 HOH A 42 112 112 HOH HOH . D 3 HOH A 43 119 119 HOH HOH . D 3 HOH A 44 120 120 HOH HOH . D 3 HOH A 45 121 121 HOH HOH . D 3 HOH A 46 125 125 HOH HOH . D 3 HOH A 47 126 126 HOH HOH . D 3 HOH A 48 133 133 HOH HOH . D 3 HOH A 49 134 134 HOH HOH . D 3 HOH A 50 135 135 HOH HOH . D 3 HOH A 51 136 136 HOH HOH . D 3 HOH A 52 137 137 HOH HOH . D 3 HOH A 53 138 138 HOH HOH . D 3 HOH A 54 142 142 HOH HOH . D 3 HOH A 55 143 143 HOH HOH . D 3 HOH A 56 145 145 HOH HOH . D 3 HOH A 57 146 146 HOH HOH . D 3 HOH A 58 153 153 HOH HOH . D 3 HOH A 59 154 154 HOH HOH . D 3 HOH A 60 155 155 HOH HOH . D 3 HOH A 61 159 159 HOH HOH . D 3 HOH A 62 161 161 HOH HOH . D 3 HOH A 63 165 165 HOH HOH . D 3 HOH A 64 166 166 HOH HOH . D 3 HOH A 65 167 167 HOH HOH . D 3 HOH A 66 170 170 HOH HOH . D 3 HOH A 67 172 172 HOH HOH . D 3 HOH A 68 175 175 HOH HOH . D 3 HOH A 69 176 176 HOH HOH . E 3 HOH B 1 1 1 HOH HOH . E 3 HOH B 2 2 2 HOH HOH . E 3 HOH B 3 3 3 HOH HOH . E 3 HOH B 4 4 4 HOH HOH . E 3 HOH B 5 6 6 HOH HOH . E 3 HOH B 6 7 7 HOH HOH . E 3 HOH B 7 8 8 HOH HOH . E 3 HOH B 8 10 10 HOH HOH . E 3 HOH B 9 11 11 HOH HOH . E 3 HOH B 10 12 12 HOH HOH . E 3 HOH B 11 13 13 HOH HOH . E 3 HOH B 12 14 14 HOH HOH . E 3 HOH B 13 15 15 HOH HOH . E 3 HOH B 14 16 16 HOH HOH . E 3 HOH B 15 17 17 HOH HOH . E 3 HOH B 16 20 20 HOH HOH . E 3 HOH B 17 22 22 HOH HOH . E 3 HOH B 18 23 23 HOH HOH . E 3 HOH B 19 25 25 HOH HOH . E 3 HOH B 20 26 26 HOH HOH . E 3 HOH B 21 27 27 HOH HOH . E 3 HOH B 22 28 28 HOH HOH . E 3 HOH B 23 29 29 HOH HOH . E 3 HOH B 24 32 32 HOH HOH . E 3 HOH B 25 35 35 HOH HOH . E 3 HOH B 26 36 36 HOH HOH . E 3 HOH B 27 38 38 HOH HOH . E 3 HOH B 28 39 39 HOH HOH . E 3 HOH B 29 40 40 HOH HOH . E 3 HOH B 30 41 41 HOH HOH . E 3 HOH B 31 44 44 HOH HOH . E 3 HOH B 32 49 49 HOH HOH . E 3 HOH B 33 50 50 HOH HOH . E 3 HOH B 34 51 51 HOH HOH . E 3 HOH B 35 53 53 HOH HOH . E 3 HOH B 36 54 54 HOH HOH . E 3 HOH B 37 57 57 HOH HOH . E 3 HOH B 38 58 58 HOH HOH . E 3 HOH B 39 61 61 HOH HOH . E 3 HOH B 40 62 62 HOH HOH . E 3 HOH B 41 63 63 HOH HOH . E 3 HOH B 42 64 64 HOH HOH . E 3 HOH B 43 66 66 HOH HOH . E 3 HOH B 44 68 68 HOH HOH . E 3 HOH B 45 70 70 HOH HOH . E 3 HOH B 46 71 71 HOH HOH . E 3 HOH B 47 73 73 HOH HOH . E 3 HOH B 48 74 74 HOH HOH . E 3 HOH B 49 75 75 HOH HOH . E 3 HOH B 50 78 78 HOH HOH . E 3 HOH B 51 79 79 HOH HOH . E 3 HOH B 52 81 81 HOH HOH . E 3 HOH B 53 84 84 HOH HOH . E 3 HOH B 54 85 85 HOH HOH . E 3 HOH B 55 86 86 HOH HOH . E 3 HOH B 56 89 89 HOH HOH . E 3 HOH B 57 90 90 HOH HOH . E 3 HOH B 58 93 93 HOH HOH . E 3 HOH B 59 94 94 HOH HOH . E 3 HOH B 60 95 95 HOH HOH . E 3 HOH B 61 97 97 HOH HOH . E 3 HOH B 62 101 101 HOH HOH . E 3 HOH B 63 106 106 HOH HOH . E 3 HOH B 64 109 109 HOH HOH . E 3 HOH B 65 113 113 HOH HOH . E 3 HOH B 66 114 114 HOH HOH . E 3 HOH B 67 115 115 HOH HOH . E 3 HOH B 68 116 116 HOH HOH . E 3 HOH B 69 117 117 HOH HOH . E 3 HOH B 70 118 118 HOH HOH . E 3 HOH B 71 122 122 HOH HOH . E 3 HOH B 72 123 123 HOH HOH . E 3 HOH B 73 124 124 HOH HOH . E 3 HOH B 74 127 127 HOH HOH . E 3 HOH B 75 128 128 HOH HOH . E 3 HOH B 76 129 129 HOH HOH . E 3 HOH B 77 130 130 HOH HOH . E 3 HOH B 78 132 132 HOH HOH . E 3 HOH B 79 140 140 HOH HOH . E 3 HOH B 80 141 141 HOH HOH . E 3 HOH B 81 144 144 HOH HOH . E 3 HOH B 82 147 147 HOH HOH . E 3 HOH B 83 149 149 HOH HOH . E 3 HOH B 84 151 151 HOH HOH . E 3 HOH B 85 152 152 HOH HOH . E 3 HOH B 86 156 156 HOH HOH . E 3 HOH B 87 157 157 HOH HOH . E 3 HOH B 88 158 158 HOH HOH . E 3 HOH B 89 160 160 HOH HOH . E 3 HOH B 90 162 162 HOH HOH . E 3 HOH B 91 163 163 HOH HOH . E 3 HOH B 92 164 164 HOH HOH . E 3 HOH B 93 173 173 HOH HOH . E 3 HOH B 94 177 177 HOH HOH . E 3 HOH B 95 178 178 HOH HOH . E 3 HOH B 96 179 179 HOH HOH . E 3 HOH B 97 180 180 HOH HOH . E 3 HOH B 98 181 181 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAD . . . C 2 -22.191 13.818 32.862 1 52.58 ? PA NAD 1395 B 1 HETATM 2 O O1A NAD . . . C 2 -20.947 14.292 32.269 1 50.27 ? O1A NAD 1395 B 1 HETATM 3 O O2A NAD . . . C 2 -22.202 13.874 34.396 1 51.8 ? O2A NAD 1395 B 1 HETATM 4 O O5B NAD . . . C 2 -22.214 12.229 32.549 1 50.85 ? O5B NAD 1395 B 1 HETATM 5 C C5B NAD . . . C 2 -22.406 11.745 31.245 1 49.16 ? C5B NAD 1395 B 1 HETATM 6 C C4B NAD . . . C 2 -23.599 10.782 31.209 1 49.17 ? C4B NAD 1395 B 1 HETATM 7 O O4B NAD . . . C 2 -23.314 9.597 31.936 1 48.24 ? O4B NAD 1395 B 1 HETATM 8 C C3B NAD . . . C 2 -24.923 11.359 31.756 1 46.98 ? C3B NAD 1395 B 1 HETATM 9 O O3B NAD . . . C 2 -25.873 11.544 30.721 1 45.39 ? O3B NAD 1395 B 1 HETATM 10 C C2B NAD . . . C 2 -25.336 10.337 32.814 1 47.61 ? C2B NAD 1395 B 1 HETATM 11 O O2B NAD . . . C 2 -26.714 10.087 32.978 1 46.59 ? O2B NAD 1395 B 1 HETATM 12 C C1B NAD . . . C 2 -24.607 9.136 32.289 1 47.29 ? C1B NAD 1395 B 1 HETATM 13 N N9A NAD . . . C 2 -24.492 8.062 33.252 1 45.64 ? N9A NAD 1395 B 1 HETATM 14 C C8A NAD . . . C 2 -24.232 8.118 34.6 1 44.54 ? C8A NAD 1395 B 1 HETATM 15 N N7A NAD . . . C 2 -24.211 6.832 35.048 1 46.2 ? N7A NAD 1395 B 1 HETATM 16 C C5A NAD . . . C 2 -24.469 5.984 34.012 1 45.69 ? C5A NAD 1395 B 1 HETATM 17 C C6A NAD . . . C 2 -24.598 4.598 33.913 1 44.05 ? C6A NAD 1395 B 1 HETATM 18 N N6A NAD . . . C 2 -24.424 3.846 34.984 1 45.42 ? N6A NAD 1395 B 1 HETATM 19 N N1A NAD . . . C 2 -24.85 4.01 32.693 1 43.59 ? N1A NAD 1395 B 1 HETATM 20 C C2A NAD . . . C 2 -25.047 4.819 31.565 1 43.38 ? C2A NAD 1395 B 1 HETATM 21 N N3A NAD . . . C 2 -24.966 6.192 31.668 1 42.87 ? N3A NAD 1395 B 1 HETATM 22 C C4A NAD . . . C 2 -24.656 6.761 32.868 1 45.58 ? C4A NAD 1395 B 1 HETATM 23 O O3 NAD . . . C 2 -23.562 14.479 32.239 1 51.08 ? O3 NAD 1395 B 1 HETATM 24 P PN NAD . . . C 2 -23.867 15.685 31.178 1 57.79 ? PN NAD 1395 B 1 HETATM 25 O O1N NAD . . . C 2 -25.271 15.54 30.661 1 57.67 ? O1N NAD 1395 B 1 HETATM 26 O O2N NAD . . . C 2 -22.805 15.684 30.162 1 56.24 ? O2N NAD 1395 B 1 HETATM 27 O O5D NAD . . . C 2 -23.932 17.09 32.029 1 62.54 ? O5D NAD 1395 B 1 HETATM 28 C C5D NAD . . . C 2 -24.168 17.169 33.449 1 68.18 ? C5D NAD 1395 B 1 HETATM 29 C C4D NAD . . . C 2 -25.161 18.263 33.912 1 71.58 ? C4D NAD 1395 B 1 HETATM 30 O O4D NAD . . . C 2 -25.07 19.454 33.118 1 74.62 ? O4D NAD 1395 B 1 HETATM 31 C C3D NAD . . . C 2 -26.63 17.816 33.864 1 73.7 ? C3D NAD 1395 B 1 HETATM 32 O O3D NAD . . . C 2 -27.356 18.209 35.015 1 72.94 ? O3D NAD 1395 B 1 HETATM 33 C C2D NAD . . . C 2 -27.185 18.529 32.646 1 75.21 ? C2D NAD 1395 B 1 HETATM 34 O O2D NAD . . . C 2 -28.57 18.799 32.724 1 76.88 ? O2D NAD 1395 B 1 HETATM 35 C C1D NAD . . . C 2 -26.356 19.811 32.597 1 76 ? C1D NAD 1395 B 1 HETATM 36 N N1N NAD . . . C 2 -26.41 20.322 31.198 1 76.59 ? N1N NAD 1395 B 1 HETATM 37 C C2N NAD . . . C 2 -27.446 21.157 30.889 1 77.14 ? C2N NAD 1395 B 1 HETATM 38 C C3N NAD . . . C 2 -27.609 21.669 29.603 1 77.69 ? C3N NAD 1395 B 1 HETATM 39 C C7N NAD . . . C 2 -28.758 22.606 29.284 1 76.94 ? C7N NAD 1395 B 1 HETATM 40 O O7N NAD . . . C 2 -28.893 23.117 27.982 1 75.57 ? O7N NAD 1395 B 1 HETATM 41 N N7N NAD . . . C 2 -29.632 22.964 30.227 1 76.93 ? N7N NAD 1395 B 1 HETATM 42 C C4N NAD . . . C 2 -26.693 21.297 28.614 1 77.9 ? C4N NAD 1395 B 1 HETATM 43 C C5N NAD . . . C 2 -25.647 20.437 28.935 1 77.49 ? C5N NAD 1395 B 1 HETATM 44 C C6N NAD . . . C 2 -25.517 19.946 30.234 1 76.68 ? C6N NAD 1395 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 44 #