data_1X27
#
_model_server_result.job_id            qyGix8rcbdOhyZk9WOegSA 
_model_server_result.datetime_utc      '2025-02-27 21:16:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1x27 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":227}' 
#
_entry.id    1X27 
#
_exptl.entry_id    1X27 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1X27 
_cell.length_a            77.415 
_cell.length_b            107.289 
_cell.length_c            166.389 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1X27 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dodecameric 
_pdbx_struct_assembly.oligomeric_count      12 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 M N N 
? 3 N N N 
? 3 O N N 
? 3 P N N 
? 3 Q N N 
? 3 R N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 G C ASP 3 I ASP 761 1_555 G N PTR 4 I PTR 762 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale2 G C PTR 4 I PTR 762 1_555 G N ASP 5 I ASP 763 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale3 H C ASP 3 J ASP 761 1_555 H N PTR 4 J PTR 762 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale4 H C PTR 4 J PTR 762 1_555 H N ASP 5 J ASP 763 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale5 I C PTR 4 K PTR 762 1_555 I N ASP 5 K ASP 763 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale6 J C ASP 3 L ASP 761 1_555 J N PTR 4 L PTR 762 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale7 J C PTR 4 L PTR 762 1_555 J N ASP 5 L ASP 763 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale8 K C PTR 4 M PTR 762 1_555 K N ASP 5 M ASP 763 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale9 L C ASP 3 N ASP 761 1_555 L N PTR 4 N PTR 762 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale10 L C PTR 4 N PTR 762 1_555 L N ASP 5 N ASP 763 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
metalc ? metalc1 A O GLU 64 A GLU 123 1_555 M NA NA . A NA 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? 
metalc ? metalc2 A O GLU 66 A GLU 125 1_555 M NA NA . A NA 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.694 ? 
metalc ? metalc3 A O PHE 69 A PHE 128 1_555 M NA NA . A NA 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.841 ? 
metalc ? metalc4 N NA NA . B NA 6 1_555 B O GLU 64 B GLU 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.787 ? 
metalc ? metalc5 N NA NA . B NA 6 1_555 B O GLU 66 B GLU 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.778 ? 
metalc ? metalc6 N NA NA . B NA 6 1_555 B O PHE 69 B PHE 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? 
metalc ? metalc7 O NA NA . C NA 14 1_555 C O GLU 64 C GLU 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.644 ? 
metalc ? metalc8 O NA NA . C NA 14 1_555 C O GLU 66 C GLU 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.735 ? 
metalc ? metalc9 O NA NA . C NA 14 1_555 C O PHE 69 C PHE 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.603 ? 
metalc ? metalc10 P NA NA . D NA 10 1_555 D O GLU 64 D GLU 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.833 ? 
metalc ? metalc11 P NA NA . D NA 10 1_555 D O GLU 66 D GLU 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.679 ? 
metalc ? metalc12 P NA NA . D NA 10 1_555 D O PHE 69 D PHE 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.841 ? 
metalc ? metalc13 E O GLU 64 E GLU 123 1_555 Q NA NA . E NA 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.734 ? 
metalc ? metalc14 E O GLU 66 E GLU 125 1_555 Q NA NA . E NA 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.712 ? 
metalc ? metalc15 E O PHE 69 E PHE 128 1_555 Q NA NA . E NA 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.644 ? 
metalc ? metalc16 R NA NA . F NA 21 1_555 F O GLU 64 F GLU 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.641 ? 
metalc ? metalc17 R NA NA . F NA 21 1_555 F O GLU 66 F GLU 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.579 ? 
metalc ? metalc18 R NA NA . F NA 21 1_555 F O PHE 69 F PHE 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.624 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1X27 
_atom_sites.fract_transf_matrix[1][1]    0.012917 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009321 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00601 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
M 3 NA A 1 227 78 NA NA . 
N 3 NA B 1 6 6 NA NA . 
O 3 NA C 1 14 14 NA NA . 
P 3 NA D 1 10 10 NA NA . 
Q 3 NA E 1 227 79 NA NA . 
R 3 NA F 1 21 21 NA NA . 
S 4 HOH A 1 228 46 HOH HOH . 
S 4 HOH A 2 229 63 HOH HOH . 
S 4 HOH A 3 230 70 HOH HOH . 
S 4 HOH A 4 231 81 HOH HOH . 
S 4 HOH A 5 232 88 HOH HOH . 
S 4 HOH A 6 233 95 HOH HOH . 
S 4 HOH A 7 234 109 HOH HOH . 
T 4 HOH B 1 227 27 HOH HOH . 
T 4 HOH B 2 228 39 HOH HOH . 
T 4 HOH B 3 229 41 HOH HOH . 
T 4 HOH B 4 230 44 HOH HOH . 
T 4 HOH B 5 231 66 HOH HOH . 
T 4 HOH B 6 232 118 HOH HOH . 
T 4 HOH B 7 233 121 HOH HOH . 
U 4 HOH C 1 227 20 HOH HOH . 
U 4 HOH C 2 228 28 HOH HOH . 
U 4 HOH C 3 229 43 HOH HOH . 
U 4 HOH C 4 230 56 HOH HOH . 
U 4 HOH C 5 231 77 HOH HOH . 
U 4 HOH C 6 232 112 HOH HOH . 
U 4 HOH C 7 233 114 HOH HOH . 
U 4 HOH C 8 234 124 HOH HOH . 
V 4 HOH D 1 227 15 HOH HOH . 
V 4 HOH D 2 228 22 HOH HOH . 
V 4 HOH D 3 229 25 HOH HOH . 
V 4 HOH D 4 230 34 HOH HOH . 
V 4 HOH D 5 231 38 HOH HOH . 
V 4 HOH D 6 232 75 HOH HOH . 
V 4 HOH D 7 233 84 HOH HOH . 
V 4 HOH D 8 234 120 HOH HOH . 
W 4 HOH E 1 228 8 HOH HOH . 
W 4 HOH E 2 229 11 HOH HOH . 
W 4 HOH E 3 230 16 HOH HOH . 
W 4 HOH E 4 231 29 HOH HOH . 
W 4 HOH E 5 232 30 HOH HOH . 
W 4 HOH E 6 233 48 HOH HOH . 
W 4 HOH E 7 234 52 HOH HOH . 
W 4 HOH E 8 235 53 HOH HOH . 
W 4 HOH E 9 236 74 HOH HOH . 
W 4 HOH E 10 237 102 HOH HOH . 
W 4 HOH E 11 238 107 HOH HOH . 
W 4 HOH E 12 239 117 HOH HOH . 
X 4 HOH F 1 227 32 HOH HOH . 
X 4 HOH F 2 228 55 HOH HOH . 
X 4 HOH F 3 229 62 HOH HOH . 
X 4 HOH F 4 230 76 HOH HOH . 
X 4 HOH F 5 231 100 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         M 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               52.055 
_atom_site.Cartn_y               50.586 
_atom_site.Cartn_z               111.512 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        51.93 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           227 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           259 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#