data_1X3F # _model_server_result.job_id QIKMbEy1rQOT_KgnZTiRFA _model_server_result.datetime_utc '2024-10-18 17:22:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1x3f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1002}' # _entry.id 1X3F # _exptl.entry_id 1X3F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 112.411 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CADMIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1X3F _cell.length_a 78.014 _cell.length_b 78.014 _cell.length_c 71.018 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1X3F _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 71.018 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 51 A GLU 51 1_555 C CD CD . A CD 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc2 A OE1 GLU 51 A GLU 51 1_555 C CD CD . A CD 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.437 ? metalc ? metalc3 A OE1 GLU 100 A GLU 100 6_656 D CD CD . B CD 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? metalc ? metalc4 A OE2 GLU 100 A GLU 100 6_656 D CD CD . B CD 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? metalc ? metalc5 C CD CD . A CD 1002 1_555 E O HOH . A HOH 1016 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? metalc ? metalc6 C CD CD . A CD 1002 1_555 E O HOH . A HOH 1017 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? metalc ? metalc7 C CD CD . A CD 1002 1_555 B OE1 GLU 69 B GLU 69 3_664 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc8 C CD CD . A CD 1002 1_555 B OE2 GLU 69 B GLU 69 3_664 ? ? ? ? ? ? ? ? ? ? ? ? 3.004 ? metalc ? metalc9 E O HOH . A HOH 1011 6_656 D CD CD . B CD 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.506 ? metalc ? metalc10 E O HOH . A HOH 1012 6_656 D CD CD . B CD 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc11 B OE2 GLU 65 B GLU 65 1_555 D CD CD . B CD 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.552 ? metalc ? metalc12 B OE1 GLU 65 B GLU 65 1_555 D CD CD . B CD 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? # _chem_comp.formula 'Cd 2' _chem_comp.formula_weight 112.411 _chem_comp.id CD _chem_comp.mon_nstd_flag . _chem_comp.name 'CADMIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1X3F _atom_sites.fract_transf_matrix[1][1] 0.012818 _atom_sites.fract_transf_matrix[1][2] 0.007401 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014801 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014081 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CD A 1 1002 2 CD CD . D 2 CD B 1 1001 1 CD CD . E 3 HOH A 1 1003 1 HOH HOH . E 3 HOH A 2 1004 5 HOH HOH . E 3 HOH A 3 1005 6 HOH HOH . E 3 HOH A 4 1006 7 HOH HOH . E 3 HOH A 5 1007 8 HOH HOH . E 3 HOH A 6 1008 9 HOH HOH . E 3 HOH A 7 1009 11 HOH HOH . E 3 HOH A 8 1010 12 HOH HOH . E 3 HOH A 9 1011 16 HOH HOH . E 3 HOH A 10 1012 17 HOH HOH . E 3 HOH A 11 1013 18 HOH HOH . E 3 HOH A 12 1014 19 HOH HOH . E 3 HOH A 13 1015 20 HOH HOH . E 3 HOH A 14 1016 21 HOH HOH . E 3 HOH A 15 1017 22 HOH HOH . E 3 HOH A 16 1018 23 HOH HOH . E 3 HOH A 17 1019 24 HOH HOH . E 3 HOH A 18 1020 25 HOH HOH . E 3 HOH A 19 1021 26 HOH HOH . E 3 HOH A 20 1022 35 HOH HOH . E 3 HOH A 21 1023 36 HOH HOH . E 3 HOH A 22 1024 37 HOH HOH . E 3 HOH A 23 1025 38 HOH HOH . E 3 HOH A 24 1026 39 HOH HOH . E 3 HOH A 25 1027 41 HOH HOH . E 3 HOH A 26 1028 42 HOH HOH . E 3 HOH A 27 1029 43 HOH HOH . E 3 HOH A 28 1030 45 HOH HOH . E 3 HOH A 29 1031 46 HOH HOH . E 3 HOH A 30 1032 47 HOH HOH . E 3 HOH A 31 1033 48 HOH HOH . E 3 HOH A 32 1034 49 HOH HOH . E 3 HOH A 33 1035 50 HOH HOH . E 3 HOH A 34 1036 51 HOH HOH . E 3 HOH A 35 1037 62 HOH HOH . E 3 HOH A 36 1038 63 HOH HOH . E 3 HOH A 37 1039 64 HOH HOH . E 3 HOH A 38 1040 65 HOH HOH . E 3 HOH A 39 1041 66 HOH HOH . E 3 HOH A 40 1042 67 HOH HOH . E 3 HOH A 41 1043 68 HOH HOH . E 3 HOH A 42 1044 70 HOH HOH . E 3 HOH A 43 1045 71 HOH HOH . E 3 HOH A 44 1046 74 HOH HOH . E 3 HOH A 45 1047 75 HOH HOH . E 3 HOH A 46 1048 77 HOH HOH . E 3 HOH A 47 1049 78 HOH HOH . E 3 HOH A 48 1050 79 HOH HOH . E 3 HOH A 49 1051 80 HOH HOH . E 3 HOH A 50 1052 81 HOH HOH . E 3 HOH A 51 1053 91 HOH HOH . E 3 HOH A 52 1054 92 HOH HOH . E 3 HOH A 53 1055 93 HOH HOH . E 3 HOH A 54 1056 94 HOH HOH . E 3 HOH A 55 1057 95 HOH HOH . E 3 HOH A 56 1058 97 HOH HOH . E 3 HOH A 57 1059 98 HOH HOH . E 3 HOH A 58 1060 99 HOH HOH . E 3 HOH A 59 1061 100 HOH HOH . E 3 HOH A 60 1062 101 HOH HOH . E 3 HOH A 61 1063 110 HOH HOH . E 3 HOH A 62 1064 111 HOH HOH . E 3 HOH A 63 1065 112 HOH HOH . E 3 HOH A 64 1066 113 HOH HOH . E 3 HOH A 65 1067 114 HOH HOH . E 3 HOH A 66 1068 115 HOH HOH . E 3 HOH A 67 1069 116 HOH HOH . E 3 HOH A 68 1070 117 HOH HOH . E 3 HOH A 69 1071 118 HOH HOH . E 3 HOH A 70 1072 119 HOH HOH . E 3 HOH A 71 1073 121 HOH HOH . E 3 HOH A 72 1074 122 HOH HOH . E 3 HOH A 73 1075 123 HOH HOH . E 3 HOH A 74 1076 124 HOH HOH . E 3 HOH A 75 1077 125 HOH HOH . E 3 HOH A 76 1078 127 HOH HOH . E 3 HOH A 77 1079 145 HOH HOH . E 3 HOH A 78 1080 146 HOH HOH . E 3 HOH A 79 1081 149 HOH HOH . E 3 HOH A 80 1082 150 HOH HOH . E 3 HOH A 81 1083 151 HOH HOH . E 3 HOH A 82 1084 152 HOH HOH . E 3 HOH A 83 1085 153 HOH HOH . E 3 HOH A 84 1086 154 HOH HOH . E 3 HOH A 85 1087 155 HOH HOH . E 3 HOH A 86 1088 161 HOH HOH . E 3 HOH A 87 1089 162 HOH HOH . E 3 HOH A 88 1090 163 HOH HOH . E 3 HOH A 89 1091 165 HOH HOH . E 3 HOH A 90 1092 169 HOH HOH . F 3 HOH B 1 1002 2 HOH HOH . F 3 HOH B 2 1003 3 HOH HOH . F 3 HOH B 3 1004 4 HOH HOH . F 3 HOH B 4 1005 10 HOH HOH . F 3 HOH B 5 1006 13 HOH HOH . F 3 HOH B 6 1007 14 HOH HOH . F 3 HOH B 7 1008 15 HOH HOH . F 3 HOH B 8 1009 27 HOH HOH . F 3 HOH B 9 1010 28 HOH HOH . F 3 HOH B 10 1011 29 HOH HOH . F 3 HOH B 11 1012 30 HOH HOH . F 3 HOH B 12 1013 31 HOH HOH . F 3 HOH B 13 1014 32 HOH HOH . F 3 HOH B 14 1015 33 HOH HOH . F 3 HOH B 15 1016 34 HOH HOH . F 3 HOH B 16 1017 40 HOH HOH . F 3 HOH B 17 1018 44 HOH HOH . F 3 HOH B 18 1019 52 HOH HOH . F 3 HOH B 19 1020 53 HOH HOH . F 3 HOH B 20 1021 54 HOH HOH . F 3 HOH B 21 1022 55 HOH HOH . F 3 HOH B 22 1023 56 HOH HOH . F 3 HOH B 23 1024 57 HOH HOH . F 3 HOH B 24 1025 58 HOH HOH . F 3 HOH B 25 1026 59 HOH HOH . F 3 HOH B 26 1027 60 HOH HOH . F 3 HOH B 27 1028 61 HOH HOH . F 3 HOH B 28 1029 69 HOH HOH . F 3 HOH B 29 1030 72 HOH HOH . F 3 HOH B 30 1031 73 HOH HOH . F 3 HOH B 31 1032 76 HOH HOH . F 3 HOH B 32 1033 82 HOH HOH . F 3 HOH B 33 1034 83 HOH HOH . F 3 HOH B 34 1035 84 HOH HOH . F 3 HOH B 35 1036 85 HOH HOH . F 3 HOH B 36 1037 86 HOH HOH . F 3 HOH B 37 1038 87 HOH HOH . F 3 HOH B 38 1039 88 HOH HOH . F 3 HOH B 39 1040 89 HOH HOH . F 3 HOH B 40 1041 90 HOH HOH . F 3 HOH B 41 1042 96 HOH HOH . F 3 HOH B 42 1043 102 HOH HOH . F 3 HOH B 43 1044 103 HOH HOH . F 3 HOH B 44 1045 104 HOH HOH . F 3 HOH B 45 1046 105 HOH HOH . F 3 HOH B 46 1047 106 HOH HOH . F 3 HOH B 47 1048 107 HOH HOH . F 3 HOH B 48 1049 108 HOH HOH . F 3 HOH B 49 1050 109 HOH HOH . F 3 HOH B 50 1051 120 HOH HOH . F 3 HOH B 51 1052 126 HOH HOH . F 3 HOH B 52 1053 128 HOH HOH . F 3 HOH B 53 1054 129 HOH HOH . F 3 HOH B 54 1055 130 HOH HOH . F 3 HOH B 55 1056 131 HOH HOH . F 3 HOH B 56 1057 132 HOH HOH . F 3 HOH B 57 1058 133 HOH HOH . F 3 HOH B 58 1059 134 HOH HOH . F 3 HOH B 59 1060 135 HOH HOH . F 3 HOH B 60 1061 136 HOH HOH . F 3 HOH B 61 1062 137 HOH HOH . F 3 HOH B 62 1063 138 HOH HOH . F 3 HOH B 63 1064 139 HOH HOH . F 3 HOH B 64 1065 140 HOH HOH . F 3 HOH B 65 1066 141 HOH HOH . F 3 HOH B 66 1067 142 HOH HOH . F 3 HOH B 67 1068 143 HOH HOH . F 3 HOH B 68 1069 144 HOH HOH . F 3 HOH B 69 1070 147 HOH HOH . F 3 HOH B 70 1071 148 HOH HOH . F 3 HOH B 71 1072 156 HOH HOH . F 3 HOH B 72 1073 157 HOH HOH . F 3 HOH B 73 1074 158 HOH HOH . F 3 HOH B 74 1075 159 HOH HOH . F 3 HOH B 75 1076 160 HOH HOH . F 3 HOH B 76 1077 164 HOH HOH . F 3 HOH B 77 1078 166 HOH HOH . F 3 HOH B 78 1079 167 HOH HOH . F 3 HOH B 79 1080 168 HOH HOH . F 3 HOH B 80 1081 170 HOH HOH . F 3 HOH B 81 1082 171 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CD _atom_site.label_atom_id CD _atom_site.label_comp_id CD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 35.536 _atom_site.Cartn_y 36.74 _atom_site.Cartn_z 36.575 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 44.23 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CD _atom_site.auth_comp_id CD _atom_site.auth_seq_id 1002 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #