data_1X77 # _model_server_result.job_id t2CQXT2G2jZiU7AeQ_Z7TQ _model_server_result.datetime_utc '2024-11-18 11:34:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1x77 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":200}' # _entry.id 1X77 # _exptl.entry_id 1X77 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1X77 _cell.length_a 61.473 _cell.length_b 65.704 _cell.length_c 117.8 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1X77 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 70 n n N1 C10 FMN doub 71 n n C2 O2 FMN doub 72 n n C2 N3 FMN sing 73 n n N3 C4 FMN sing 74 n n N3 HN3 FMN sing 75 n n C4 O4 FMN doub 76 n n C4 C4A FMN sing 77 n n C4A N5 FMN doub 78 n n C4A C10 FMN sing 79 n n N5 C5A FMN sing 80 n n C5A C6 FMN doub 81 n y C5A C9A FMN sing 82 n y C6 C7 FMN sing 83 n y C6 H6 FMN sing 84 n n C7 C7M FMN sing 85 n n C7 C8 FMN doub 86 n y C7M HM71 FMN sing 87 n n C7M HM72 FMN sing 88 n n C7M HM73 FMN sing 89 n n C8 C8M FMN sing 90 n n C8 C9 FMN sing 91 n y C8M HM81 FMN sing 92 n n C8M HM82 FMN sing 93 n n C8M HM83 FMN sing 94 n n C9 C9A FMN doub 95 n y C9 H9 FMN sing 96 n n C9A N10 FMN sing 97 n n N10 C10 FMN sing 98 n n N10 C1' FMN sing 99 n n C1' C2' FMN sing 100 n n C1' "H1'1" FMN sing 101 n n C1' "H1'2" FMN sing 102 n n C2' O2' FMN sing 103 n n C2' C3' FMN sing 104 n n C2' H2' FMN sing 105 n n O2' HO2' FMN sing 106 n n C3' O3' FMN sing 107 n n C3' C4' FMN sing 108 n n C3' H3' FMN sing 109 n n O3' HO3' FMN sing 110 n n C4' O4' FMN sing 111 n n C4' C5' FMN sing 112 n n C4' H4' FMN sing 113 n n O4' HO4' FMN sing 114 n n C5' O5' FMN sing 115 n n C5' "H5'1" FMN sing 116 n n C5' "H5'2" FMN sing 117 n n O5' P FMN sing 118 n n P O1P FMN doub 119 n n P O2P FMN sing 120 n n P O3P FMN sing 121 n n O2P HOP2 FMN sing 122 n n O3P HOP3 FMN sing 123 n n # _atom_sites.entry_id 1X77 _atom_sites.fract_transf_matrix[1][1] 0.016267 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01522 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008489 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FMN A 1 200 200 FMN FMN . D 2 FMN B 1 200 200 FMN FMN . E 3 HOH A 1 201 10 HOH HOH . E 3 HOH A 2 202 11 HOH HOH . E 3 HOH A 3 203 12 HOH HOH . E 3 HOH A 4 204 13 HOH HOH . E 3 HOH A 5 205 14 HOH HOH . E 3 HOH A 6 206 16 HOH HOH . E 3 HOH A 7 207 17 HOH HOH . E 3 HOH A 8 208 18 HOH HOH . E 3 HOH A 9 209 20 HOH HOH . E 3 HOH A 10 210 21 HOH HOH . E 3 HOH A 11 211 23 HOH HOH . E 3 HOH A 12 212 24 HOH HOH . E 3 HOH A 13 213 25 HOH HOH . E 3 HOH A 14 214 26 HOH HOH . E 3 HOH A 15 215 27 HOH HOH . E 3 HOH A 16 216 28 HOH HOH . E 3 HOH A 17 217 30 HOH HOH . E 3 HOH A 18 218 31 HOH HOH . E 3 HOH A 19 219 34 HOH HOH . E 3 HOH A 20 220 35 HOH HOH . E 3 HOH A 21 221 36 HOH HOH . E 3 HOH A 22 222 37 HOH HOH . E 3 HOH A 23 223 38 HOH HOH . E 3 HOH A 24 224 39 HOH HOH . E 3 HOH A 25 225 40 HOH HOH . E 3 HOH A 26 226 41 HOH HOH . E 3 HOH A 27 227 43 HOH HOH . E 3 HOH A 28 228 44 HOH HOH . E 3 HOH A 29 229 47 HOH HOH . E 3 HOH A 30 230 49 HOH HOH . E 3 HOH A 31 231 50 HOH HOH . E 3 HOH A 32 232 51 HOH HOH . E 3 HOH A 33 233 53 HOH HOH . E 3 HOH A 34 234 54 HOH HOH . E 3 HOH A 35 235 56 HOH HOH . E 3 HOH A 36 236 58 HOH HOH . E 3 HOH A 37 237 59 HOH HOH . E 3 HOH A 38 238 62 HOH HOH . E 3 HOH A 39 239 63 HOH HOH . E 3 HOH A 40 240 64 HOH HOH . E 3 HOH A 41 241 65 HOH HOH . E 3 HOH A 42 242 71 HOH HOH . E 3 HOH A 43 243 72 HOH HOH . E 3 HOH A 44 244 75 HOH HOH . E 3 HOH A 45 245 76 HOH HOH . E 3 HOH A 46 246 77 HOH HOH . E 3 HOH A 47 247 83 HOH HOH . E 3 HOH A 48 248 86 HOH HOH . E 3 HOH A 49 249 88 HOH HOH . E 3 HOH A 50 250 90 HOH HOH . E 3 HOH A 51 251 93 HOH HOH . E 3 HOH A 52 252 95 HOH HOH . E 3 HOH A 53 253 97 HOH HOH . E 3 HOH A 54 254 98 HOH HOH . E 3 HOH A 55 255 99 HOH HOH . E 3 HOH A 56 256 107 HOH HOH . E 3 HOH A 57 257 109 HOH HOH . E 3 HOH A 58 258 113 HOH HOH . E 3 HOH A 59 259 116 HOH HOH . E 3 HOH A 60 260 117 HOH HOH . E 3 HOH A 61 261 120 HOH HOH . E 3 HOH A 62 262 126 HOH HOH . E 3 HOH A 63 263 131 HOH HOH . E 3 HOH A 64 264 137 HOH HOH . E 3 HOH A 65 265 139 HOH HOH . E 3 HOH A 66 266 143 HOH HOH . E 3 HOH A 67 267 145 HOH HOH . E 3 HOH A 68 268 146 HOH HOH . E 3 HOH A 69 269 149 HOH HOH . E 3 HOH A 70 270 151 HOH HOH . E 3 HOH A 71 271 153 HOH HOH . E 3 HOH A 72 272 156 HOH HOH . E 3 HOH A 73 273 159 HOH HOH . E 3 HOH A 74 274 161 HOH HOH . E 3 HOH A 75 275 163 HOH HOH . E 3 HOH A 76 276 174 HOH HOH . E 3 HOH A 77 277 175 HOH HOH . E 3 HOH A 78 278 182 HOH HOH . E 3 HOH A 79 279 192 HOH HOH . E 3 HOH A 80 280 193 HOH HOH . E 3 HOH A 81 281 198 HOH HOH . E 3 HOH A 82 282 199 HOH HOH . E 3 HOH A 83 283 203 HOH HOH . E 3 HOH A 84 284 204 HOH HOH . E 3 HOH A 85 285 211 HOH HOH . E 3 HOH A 86 286 214 HOH HOH . E 3 HOH A 87 287 223 HOH HOH . E 3 HOH A 88 288 232 HOH HOH . F 3 HOH B 1 201 1 HOH HOH . F 3 HOH B 2 202 2 HOH HOH . F 3 HOH B 3 203 3 HOH HOH . F 3 HOH B 4 204 4 HOH HOH . F 3 HOH B 5 205 5 HOH HOH . F 3 HOH B 6 206 6 HOH HOH . F 3 HOH B 7 207 7 HOH HOH . F 3 HOH B 8 208 8 HOH HOH . F 3 HOH B 9 209 9 HOH HOH . F 3 HOH B 10 210 15 HOH HOH . F 3 HOH B 11 211 19 HOH HOH . F 3 HOH B 12 212 22 HOH HOH . F 3 HOH B 13 213 29 HOH HOH . F 3 HOH B 14 214 32 HOH HOH . F 3 HOH B 15 215 33 HOH HOH . F 3 HOH B 16 216 42 HOH HOH . F 3 HOH B 17 217 45 HOH HOH . F 3 HOH B 18 218 46 HOH HOH . F 3 HOH B 19 219 48 HOH HOH . F 3 HOH B 20 220 52 HOH HOH . F 3 HOH B 21 221 55 HOH HOH . F 3 HOH B 22 222 57 HOH HOH . F 3 HOH B 23 223 60 HOH HOH . F 3 HOH B 24 224 61 HOH HOH . F 3 HOH B 25 225 66 HOH HOH . F 3 HOH B 26 226 67 HOH HOH . F 3 HOH B 27 227 68 HOH HOH . F 3 HOH B 28 228 69 HOH HOH . F 3 HOH B 29 229 70 HOH HOH . F 3 HOH B 30 230 74 HOH HOH . F 3 HOH B 31 231 79 HOH HOH . F 3 HOH B 32 232 80 HOH HOH . F 3 HOH B 33 233 81 HOH HOH . F 3 HOH B 34 234 82 HOH HOH . F 3 HOH B 35 235 84 HOH HOH . F 3 HOH B 36 236 87 HOH HOH . F 3 HOH B 37 237 89 HOH HOH . F 3 HOH B 38 238 92 HOH HOH . F 3 HOH B 39 239 94 HOH HOH . F 3 HOH B 40 240 96 HOH HOH . F 3 HOH B 41 241 100 HOH HOH . F 3 HOH B 42 242 101 HOH HOH . F 3 HOH B 43 243 102 HOH HOH . F 3 HOH B 44 244 103 HOH HOH . F 3 HOH B 45 245 104 HOH HOH . F 3 HOH B 46 246 119 HOH HOH . F 3 HOH B 47 247 122 HOH HOH . F 3 HOH B 48 248 124 HOH HOH . F 3 HOH B 49 249 141 HOH HOH . F 3 HOH B 50 250 142 HOH HOH . F 3 HOH B 51 251 147 HOH HOH . F 3 HOH B 52 252 150 HOH HOH . F 3 HOH B 53 253 152 HOH HOH . F 3 HOH B 54 254 155 HOH HOH . F 3 HOH B 55 255 157 HOH HOH . F 3 HOH B 56 256 158 HOH HOH . F 3 HOH B 57 257 169 HOH HOH . F 3 HOH B 58 258 171 HOH HOH . F 3 HOH B 59 259 172 HOH HOH . F 3 HOH B 60 260 183 HOH HOH . F 3 HOH B 61 261 188 HOH HOH . F 3 HOH B 62 262 195 HOH HOH . F 3 HOH B 63 263 201 HOH HOH . F 3 HOH B 64 264 202 HOH HOH . F 3 HOH B 65 265 207 HOH HOH . F 3 HOH B 66 266 208 HOH HOH . F 3 HOH B 67 267 210 HOH HOH . F 3 HOH B 68 268 215 HOH HOH . F 3 HOH B 69 269 227 HOH HOH . F 3 HOH B 70 270 229 HOH HOH . F 3 HOH B 71 271 231 HOH HOH . F 3 HOH B 72 272 236 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . D 2 29.364 19.574 23.51 1 37.81 ? N1 FMN 200 B 1 HETATM 2 C C2 FMN . . . D 2 30.28 19.082 22.613 1 39.56 ? C2 FMN 200 B 1 HETATM 3 O O2 FMN . . . D 2 31.461 18.969 22.872 1 43.08 ? O2 FMN 200 B 1 HETATM 4 N N3 FMN . . . D 2 29.773 18.716 21.357 1 38.52 ? N3 FMN 200 B 1 HETATM 5 C C4 FMN . . . D 2 28.431 18.798 20.913 1 36.04 ? C4 FMN 200 B 1 HETATM 6 O O4 FMN . . . D 2 28.131 18.446 19.786 1 38.38 ? O4 FMN 200 B 1 HETATM 7 C C4A FMN . . . D 2 27.553 19.302 21.848 1 34.83 ? C4A FMN 200 B 1 HETATM 8 N N5 FMN . . . D 2 26.227 19.472 21.636 1 33.92 ? N5 FMN 200 B 1 HETATM 9 C C5A FMN . . . D 2 25.242 19.967 22.45 1 35.32 ? C5A FMN 200 B 1 HETATM 10 C C6 FMN . . . D 2 23.861 20.067 21.981 1 35.5 ? C6 FMN 200 B 1 HETATM 11 C C7 FMN . . . D 2 22.854 20.619 22.895 1 35.19 ? C7 FMN 200 B 1 HETATM 12 C C7M FMN . . . D 2 21.43 20.71 22.365 1 37.35 ? C7M FMN 200 B 1 HETATM 13 C C8 FMN . . . D 2 23.251 21.049 24.256 1 35.57 ? C8 FMN 200 B 1 HETATM 14 C C8M FMN . . . D 2 22.281 21.653 25.309 1 33.62 ? C8M FMN 200 B 1 HETATM 15 C C9 FMN . . . D 2 24.633 20.913 24.653 1 35.1 ? C9 FMN 200 B 1 HETATM 16 C C9A FMN . . . D 2 25.65 20.365 23.746 1 34.55 ? C9A FMN 200 B 1 HETATM 17 N N10 FMN . . . D 2 27.035 20.201 24.031 1 33.71 ? N10 FMN 200 B 1 HETATM 18 C C10 FMN . . . D 2 28.049 19.685 23.159 1 34.56 ? C10 FMN 200 B 1 HETATM 19 C C1' FMN . . . D 2 27.418 20.647 25.444 1 33.72 ? C1' FMN 200 B 1 HETATM 20 C C2' FMN . . . D 2 27.819 22.125 25.584 1 35.91 ? C2' FMN 200 B 1 HETATM 21 O O2' FMN . . . D 2 29.023 22.408 24.871 1 35.68 ? O2' FMN 200 B 1 HETATM 22 C C3' FMN . . . D 2 28.045 22.444 27.05 1 36.75 ? C3' FMN 200 B 1 HETATM 23 O O3' FMN . . . D 2 26.843 22.151 27.781 1 36.3 ? O3' FMN 200 B 1 HETATM 24 C C4' FMN . . . D 2 28.467 23.939 27.249 1 37.55 ? C4' FMN 200 B 1 HETATM 25 O O4' FMN . . . D 2 28.766 24.171 28.638 1 40.56 ? O4' FMN 200 B 1 HETATM 26 C C5' FMN . . . D 2 27.421 24.97 26.982 1 37.75 ? C5' FMN 200 B 1 HETATM 27 O O5' FMN . . . D 2 27.981 26.236 27.254 1 40.71 ? O5' FMN 200 B 1 HETATM 28 P P FMN . . . D 2 27.185 27.569 27.124 1 38.94 ? P FMN 200 B 1 HETATM 29 O O1P FMN . . . D 2 26.656 27.637 25.752 1 44.57 ? O1P FMN 200 B 1 HETATM 30 O O2P FMN . . . D 2 26.137 27.437 28.139 1 38.19 ? O2P FMN 200 B 1 HETATM 31 O O3P FMN . . . D 2 28.147 28.591 27.499 1 39.67 ? O3P FMN 200 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 232 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 31 #