data_1X79 # _model_server_result.job_id tv2rEoXW0jCqsy-8uzx7hg _model_server_result.datetime_utc '2025-03-05 18:38:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1x79 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":394}' # _entry.id 1X79 # _exptl.entry_id 1X79 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 154.251 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2,3-DIHYDROXY-1,4-DITHIOBUTANE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1X79 _cell.length_a 155.222 _cell.length_b 155.222 _cell.length_c 53.052 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1X79 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 G N N # _chem_comp.formula 'C4 H10 O2 S2' _chem_comp.formula_weight 154.251 _chem_comp.id DTT _chem_comp.mon_nstd_flag . _chem_comp.name 2,3-DIHYDROXY-1,4-DITHIOBUTANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1,4-DITHIOTHREITOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S1 C1 DTT sing 83 n n S1 HS1 DTT sing 84 n n C1 C2 DTT sing 85 n n C1 H11 DTT sing 86 n n C1 H12 DTT sing 87 n n C2 O2 DTT sing 88 n n C2 C3 DTT sing 89 n n C2 H2 DTT sing 90 n n O2 HO2 DTT sing 91 n n C3 O3 DTT sing 92 n n C3 C4 DTT sing 93 n n C3 H3 DTT sing 94 n n O3 HO3 DTT sing 95 n n C4 S4 DTT sing 96 n n C4 H41 DTT sing 97 n n C4 H42 DTT sing 98 n n S4 HS2 DTT sing 99 n n # _atom_sites.entry_id 1X79 _atom_sites.fract_transf_matrix[1][1] 0.006442 _atom_sites.fract_transf_matrix[1][2] 0.00372 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007439 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018849 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 SO4 B 1 391 391 SO4 SO4 . E 4 DTT B 1 395 395 DTT DTT . F 3 SO4 C 1 392 392 SO4 SO4 . G 4 DTT C 1 394 394 DTT DTT . H 5 HOH A 1 401 401 HOH TIP . H 5 HOH A 2 402 402 HOH TIP . H 5 HOH A 3 419 419 HOH TIP . H 5 HOH A 4 420 420 HOH TIP . H 5 HOH A 5 421 421 HOH TIP . H 5 HOH A 6 422 422 HOH TIP . H 5 HOH A 7 423 423 HOH TIP . H 5 HOH A 8 444 444 HOH TIP . H 5 HOH A 9 445 445 HOH TIP . H 5 HOH A 10 446 446 HOH TIP . H 5 HOH A 11 447 447 HOH TIP . H 5 HOH A 12 449 449 HOH TIP . H 5 HOH A 13 450 450 HOH TIP . H 5 HOH A 14 451 451 HOH TIP . H 5 HOH A 15 464 464 HOH TIP . H 5 HOH A 16 465 465 HOH TIP . H 5 HOH A 17 467 467 HOH TIP . H 5 HOH A 18 468 468 HOH TIP . H 5 HOH A 19 477 477 HOH TIP . H 5 HOH A 20 490 490 HOH TIP . H 5 HOH A 21 491 491 HOH TIP . H 5 HOH A 22 492 492 HOH TIP . H 5 HOH A 23 500 500 HOH TIP . H 5 HOH A 24 501 501 HOH TIP . H 5 HOH A 25 502 502 HOH TIP . H 5 HOH A 26 507 507 HOH TIP . H 5 HOH A 27 508 508 HOH TIP . H 5 HOH A 28 509 509 HOH TIP . I 5 HOH B 1 403 403 HOH TIP . I 5 HOH B 2 404 404 HOH TIP . I 5 HOH B 3 405 405 HOH TIP . I 5 HOH B 4 406 406 HOH TIP . I 5 HOH B 5 407 407 HOH TIP . I 5 HOH B 6 408 408 HOH TIP . I 5 HOH B 7 409 409 HOH TIP . I 5 HOH B 8 410 410 HOH TIP . I 5 HOH B 9 411 411 HOH TIP . I 5 HOH B 10 424 424 HOH TIP . I 5 HOH B 11 425 425 HOH TIP . I 5 HOH B 12 426 426 HOH TIP . I 5 HOH B 13 427 427 HOH TIP . I 5 HOH B 14 428 428 HOH TIP . I 5 HOH B 15 429 429 HOH TIP . I 5 HOH B 16 430 430 HOH TIP . I 5 HOH B 17 431 431 HOH TIP . I 5 HOH B 18 432 432 HOH TIP . I 5 HOH B 19 433 433 HOH TIP . I 5 HOH B 20 452 452 HOH TIP . I 5 HOH B 21 453 453 HOH TIP . I 5 HOH B 22 454 454 HOH TIP . I 5 HOH B 23 455 455 HOH TIP . I 5 HOH B 24 456 456 HOH TIP . I 5 HOH B 25 469 469 HOH TIP . I 5 HOH B 26 470 470 HOH TIP . I 5 HOH B 27 471 471 HOH TIP . I 5 HOH B 28 472 472 HOH TIP . I 5 HOH B 29 488 488 HOH TIP . I 5 HOH B 30 493 493 HOH TIP . I 5 HOH B 31 494 494 HOH TIP . I 5 HOH B 32 495 495 HOH TIP . I 5 HOH B 33 496 496 HOH TIP . I 5 HOH B 34 497 497 HOH TIP . I 5 HOH B 35 503 503 HOH TIP . I 5 HOH B 36 504 504 HOH TIP . I 5 HOH B 37 505 505 HOH TIP . I 5 HOH B 38 510 510 HOH TIP . I 5 HOH B 39 511 511 HOH TIP . I 5 HOH B 40 512 512 HOH TIP . I 5 HOH B 41 513 513 HOH TIP . I 5 HOH B 42 514 514 HOH TIP . J 5 HOH C 1 412 412 HOH TIP . J 5 HOH C 2 413 413 HOH TIP . J 5 HOH C 3 414 414 HOH TIP . J 5 HOH C 4 415 415 HOH TIP . J 5 HOH C 5 416 416 HOH TIP . J 5 HOH C 6 417 417 HOH TIP . J 5 HOH C 7 418 418 HOH TIP . J 5 HOH C 8 434 434 HOH TIP . J 5 HOH C 9 435 435 HOH TIP . J 5 HOH C 10 436 436 HOH TIP . J 5 HOH C 11 437 437 HOH TIP . J 5 HOH C 12 438 438 HOH TIP . J 5 HOH C 13 439 439 HOH TIP . J 5 HOH C 14 440 440 HOH TIP . J 5 HOH C 15 441 441 HOH TIP . J 5 HOH C 16 442 442 HOH TIP . J 5 HOH C 17 443 443 HOH TIP . J 5 HOH C 18 448 448 HOH TIP . J 5 HOH C 19 457 457 HOH TIP . J 5 HOH C 20 458 458 HOH TIP . J 5 HOH C 21 459 459 HOH TIP . J 5 HOH C 22 460 460 HOH TIP . J 5 HOH C 23 461 461 HOH TIP . J 5 HOH C 24 462 462 HOH TIP . J 5 HOH C 25 463 463 HOH TIP . J 5 HOH C 26 466 466 HOH TIP . J 5 HOH C 27 473 473 HOH TIP . J 5 HOH C 28 474 474 HOH TIP . J 5 HOH C 29 475 475 HOH TIP . J 5 HOH C 30 476 476 HOH TIP . J 5 HOH C 31 478 478 HOH TIP . J 5 HOH C 32 479 479 HOH TIP . J 5 HOH C 33 480 480 HOH TIP . J 5 HOH C 34 481 481 HOH TIP . J 5 HOH C 35 482 482 HOH TIP . J 5 HOH C 36 483 483 HOH TIP . J 5 HOH C 37 484 484 HOH TIP . J 5 HOH C 38 485 485 HOH TIP . J 5 HOH C 39 486 486 HOH TIP . J 5 HOH C 40 487 487 HOH TIP . J 5 HOH C 41 489 489 HOH TIP . J 5 HOH C 42 498 498 HOH TIP . J 5 HOH C 43 499 499 HOH TIP . J 5 HOH C 44 506 506 HOH TIP . J 5 HOH C 45 515 515 HOH TIP . J 5 HOH C 46 516 516 HOH TIP . J 5 HOH C 47 517 517 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S1 DTT . . . G 4 88.827 37.918 21.791 1 86.64 ? S1 DTT 394 C 1 HETATM 2 C C1 DTT . . . G 4 88.823 37.482 20.066 1 75.12 ? C1 DTT 394 C 1 HETATM 3 C C2 DTT . . . G 4 88.194 36.178 20.242 1 65.42 ? C2 DTT 394 C 1 HETATM 4 O O2 DTT . . . G 4 87.16 36.344 19.958 1 57.61 ? O2 DTT 394 C 1 HETATM 5 C C3 DTT . . . G 4 88.893 35.092 19.595 1 66.01 ? C3 DTT 394 C 1 HETATM 6 O O3 DTT . . . G 4 88.251 34.015 20.063 1 57.86 ? O3 DTT 394 C 1 HETATM 7 C C4 DTT . . . G 4 90.258 34.842 19.895 1 74.38 ? C4 DTT 394 C 1 HETATM 8 S S4 DTT . . . G 4 90.627 34.582 18.214 1 83.95 ? S4 DTT 394 C 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 8 #