data_1X7P
#
_model_server_result.job_id            zEdZC_yha_1wEzyRi-aocQ 
_model_server_result.datetime_utc      '2024-11-05 04:07:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1x7p 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":302}' 
#
_entry.id    1X7P 
#
_exptl.entry_id    1X7P 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              398.437 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            S-ADENOSYLMETHIONINE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1X7P 
_cell.length_a            76.881 
_cell.length_b            76.881 
_cell.length_c            209.818 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1X7P 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C15 H22 N6 O5 S' 
_chem_comp.formula_weight    398.437 
_chem_comp.id                SAM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              S-ADENOSYLMETHIONINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA SAM sing 277 n n 
N HN1 SAM sing 278 n n 
N HN2 SAM sing 279 n n 
CA C SAM sing 280 n n 
CA CB SAM sing 281 n n 
CA HA SAM sing 282 n n 
C O SAM doub 283 n n 
C OXT SAM sing 284 n n 
CB CG SAM sing 285 n n 
CB HB1 SAM sing 286 n n 
CB HB2 SAM sing 287 n n 
CG SD SAM sing 288 n n 
CG HG1 SAM sing 289 n n 
CG HG2 SAM sing 290 n n 
SD CE SAM sing 291 n n 
SD C5' SAM sing 292 n n 
CE HE1 SAM sing 293 n n 
CE HE2 SAM sing 294 n n 
CE HE3 SAM sing 295 n n 
C5' C4' SAM sing 296 n n 
C5' "H5'1" SAM sing 297 n n 
C5' "H5'2" SAM sing 298 n n 
C4' O4' SAM sing 299 n n 
C4' C3' SAM sing 300 n n 
C4' H4' SAM sing 301 n n 
O4' C1' SAM sing 302 n n 
C3' O3' SAM sing 303 n n 
C3' C2' SAM sing 304 n n 
C3' H3' SAM sing 305 n n 
O3' HO3' SAM sing 306 n n 
C2' O2' SAM sing 307 n n 
C2' C1' SAM sing 308 n n 
C2' H2' SAM sing 309 n n 
O2' HO2' SAM sing 310 n n 
C1' N9 SAM sing 311 n n 
C1' H1' SAM sing 312 n n 
N9 C8 SAM sing 313 n y 
N9 C4 SAM sing 314 n y 
C8 N7 SAM doub 315 n y 
C8 H8 SAM sing 316 n n 
N7 C5 SAM sing 317 n y 
C5 C6 SAM sing 318 n y 
C5 C4 SAM doub 319 n y 
C6 N6 SAM sing 320 n n 
C6 N1 SAM doub 321 n y 
N6 HN61 SAM sing 322 n n 
N6 HN62 SAM sing 323 n n 
N1 C2 SAM sing 324 n y 
C2 N3 SAM doub 325 n y 
C2 H2 SAM sing 326 n n 
N3 C4 SAM sing 327 n y 
#
_atom_sites.entry_id                     1X7P 
_atom_sites.fract_transf_matrix[1][1]    0.013007 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013007 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004766 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SAM A 1 301 301 SAM SAM . 
D 2 SAM B 1 302 302 SAM SAM . 
E 3 HOH A 1 302 1 HOH HOH . 
E 3 HOH A 2 303 2 HOH HOH . 
E 3 HOH A 3 304 3 HOH HOH . 
E 3 HOH A 4 305 5 HOH HOH . 
E 3 HOH A 5 306 6 HOH HOH . 
E 3 HOH A 6 307 9 HOH HOH . 
E 3 HOH A 7 308 11 HOH HOH . 
E 3 HOH A 8 309 12 HOH HOH . 
E 3 HOH A 9 310 14 HOH HOH . 
E 3 HOH A 10 311 15 HOH HOH . 
E 3 HOH A 11 312 16 HOH HOH . 
E 3 HOH A 12 313 17 HOH HOH . 
E 3 HOH A 13 314 18 HOH HOH . 
E 3 HOH A 14 315 21 HOH HOH . 
E 3 HOH A 15 316 22 HOH HOH . 
E 3 HOH A 16 317 23 HOH HOH . 
E 3 HOH A 17 318 24 HOH HOH . 
E 3 HOH A 18 319 25 HOH HOH . 
E 3 HOH A 19 320 27 HOH HOH . 
E 3 HOH A 20 321 30 HOH HOH . 
E 3 HOH A 21 322 31 HOH HOH . 
E 3 HOH A 22 323 33 HOH HOH . 
E 3 HOH A 23 324 34 HOH HOH . 
E 3 HOH A 24 325 35 HOH HOH . 
E 3 HOH A 25 326 37 HOH HOH . 
E 3 HOH A 26 327 41 HOH HOH . 
E 3 HOH A 27 328 42 HOH HOH . 
E 3 HOH A 28 329 45 HOH HOH . 
E 3 HOH A 29 330 46 HOH HOH . 
E 3 HOH A 30 331 47 HOH HOH . 
E 3 HOH A 31 332 48 HOH HOH . 
E 3 HOH A 32 333 51 HOH HOH . 
E 3 HOH A 33 334 52 HOH HOH . 
E 3 HOH A 34 335 55 HOH HOH . 
E 3 HOH A 35 336 58 HOH HOH . 
E 3 HOH A 36 337 59 HOH HOH . 
E 3 HOH A 37 338 60 HOH HOH . 
E 3 HOH A 38 339 61 HOH HOH . 
E 3 HOH A 39 340 62 HOH HOH . 
E 3 HOH A 40 341 63 HOH HOH . 
E 3 HOH A 41 342 64 HOH HOH . 
E 3 HOH A 42 343 65 HOH HOH . 
E 3 HOH A 43 344 67 HOH HOH . 
E 3 HOH A 44 345 68 HOH HOH . 
E 3 HOH A 45 346 69 HOH HOH . 
E 3 HOH A 46 347 70 HOH HOH . 
E 3 HOH A 47 348 71 HOH HOH . 
E 3 HOH A 48 349 72 HOH HOH . 
E 3 HOH A 49 350 73 HOH HOH . 
E 3 HOH A 50 351 74 HOH HOH . 
E 3 HOH A 51 352 75 HOH HOH . 
E 3 HOH A 52 353 76 HOH HOH . 
E 3 HOH A 53 354 77 HOH HOH . 
E 3 HOH A 54 355 78 HOH HOH . 
E 3 HOH A 55 356 79 HOH HOH . 
E 3 HOH A 56 357 80 HOH HOH . 
E 3 HOH A 57 358 82 HOH HOH . 
E 3 HOH A 58 359 83 HOH HOH . 
F 3 HOH B 1 303 4 HOH HOH . 
F 3 HOH B 2 304 7 HOH HOH . 
F 3 HOH B 3 305 8 HOH HOH . 
F 3 HOH B 4 306 10 HOH HOH . 
F 3 HOH B 5 307 13 HOH HOH . 
F 3 HOH B 6 308 19 HOH HOH . 
F 3 HOH B 7 309 20 HOH HOH . 
F 3 HOH B 8 310 26 HOH HOH . 
F 3 HOH B 9 311 28 HOH HOH . 
F 3 HOH B 10 312 29 HOH HOH . 
F 3 HOH B 11 313 32 HOH HOH . 
F 3 HOH B 12 314 36 HOH HOH . 
F 3 HOH B 13 315 38 HOH HOH . 
F 3 HOH B 14 316 39 HOH HOH . 
F 3 HOH B 15 317 40 HOH HOH . 
F 3 HOH B 16 318 43 HOH HOH . 
F 3 HOH B 17 319 44 HOH HOH . 
F 3 HOH B 18 320 49 HOH HOH . 
F 3 HOH B 19 321 50 HOH HOH . 
F 3 HOH B 20 322 53 HOH HOH . 
F 3 HOH B 21 323 54 HOH HOH . 
F 3 HOH B 22 324 56 HOH HOH . 
F 3 HOH B 23 325 57 HOH HOH . 
F 3 HOH B 24 326 66 HOH HOH . 
F 3 HOH B 25 327 81 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N SAM . . . D 2 52.564 5.636 104.404 1 66.41 ? N SAM 302 B 1 
HETATM 2 C CA SAM . . . D 2 51.284 6.334 104.558 1 66.26 ? CA SAM 302 B 1 
HETATM 3 C C SAM . . . D 2 50.723 6.017 105.954 1 67 ? C SAM 302 B 1 
HETATM 4 O O SAM . . . D 2 51.481 5.804 106.923 1 67.32 ? O SAM 302 B 1 
HETATM 5 O OXT SAM . . . D 2 49.497 5.982 106.137 1 67.92 ? OXT SAM 302 B 1 
HETATM 6 C CB SAM . . . D 2 50.248 6.069 103.424 1 65.59 ? CB SAM 302 B 1 
HETATM 7 C CG SAM . . . D 2 50.746 5.588 102.045 1 62.58 ? CG SAM 302 B 1 
HETATM 8 S SD SAM . . . D 2 50.558 6.737 100.633 1 56.57 ? SD SAM 302 B 1 
HETATM 9 C CE SAM . . . D 2 48.757 6.886 100.476 1 57.39 ? CE SAM 302 B 1 
HETATM 10 C C5' SAM . . . D 2 50.959 5.65 99.231 1 52.38 ? C5' SAM 302 B 1 
HETATM 11 C C4' SAM . . . D 2 52.403 5.628 98.723 1 49.23 ? C4' SAM 302 B 1 
HETATM 12 O O4' SAM . . . D 2 52.629 6.681 97.778 1 47.32 ? O4' SAM 302 B 1 
HETATM 13 C C3' SAM . . . D 2 53.496 5.772 99.781 1 47.03 ? C3' SAM 302 B 1 
HETATM 14 O O3' SAM . . . D 2 53.969 4.516 100.172 1 47.18 ? O3' SAM 302 B 1 
HETATM 15 C C2' SAM . . . D 2 54.586 6.558 99.08 1 45.56 ? C2' SAM 302 B 1 
HETATM 16 O O2' SAM . . . D 2 55.455 5.717 98.353 1 45.86 ? O2' SAM 302 B 1 
HETATM 17 C C1' SAM . . . D 2 53.841 7.371 98.056 1 43.52 ? C1' SAM 302 B 1 
HETATM 18 N N9 SAM . . . D 2 53.614 8.753 98.518 1 39.56 ? N9 SAM 302 B 1 
HETATM 19 C C8 SAM . . . D 2 52.433 9.396 98.778 1 37.71 ? C8 SAM 302 B 1 
HETATM 20 N N7 SAM . . . D 2 52.713 10.676 99.135 1 37.08 ? N7 SAM 302 B 1 
HETATM 21 C C5 SAM . . . D 2 54.051 10.849 99.102 1 35.53 ? C5 SAM 302 B 1 
HETATM 22 C C6 SAM . . . D 2 54.881 11.926 99.382 1 35.88 ? C6 SAM 302 B 1 
HETATM 23 N N6 SAM . . . D 2 54.396 13.113 99.759 1 34.22 ? N6 SAM 302 B 1 
HETATM 24 N N1 SAM . . . D 2 56.244 11.75 99.267 1 34.61 ? N1 SAM 302 B 1 
HETATM 25 C C2 SAM . . . D 2 56.782 10.553 98.868 1 34.64 ? C2 SAM 302 B 1 
HETATM 26 N N3 SAM . . . D 2 55.951 9.494 98.614 1 35.01 ? N3 SAM 302 B 1 
HETATM 27 C C4 SAM . . . D 2 54.62 9.646 98.723 1 36.22 ? C4 SAM 302 B 1 
#
_model_server_stats.io_time_ms              61 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           312 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           27 
#