data_1X8K
#
_model_server_result.job_id            ZjeV-94jGLfaN-FVGXVsVg 
_model_server_result.datetime_utc      '2024-10-20 00:38:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1x8k 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":1102}' 
#
_entry.id    1X8K 
#
_exptl.entry_id    1X8K 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              268.436 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            ANHYDRORETINOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          110.66 
_cell.angle_gamma         90 
_cell.entry_id            1X8K 
_cell.length_a            81.286 
_cell.length_b            66.661 
_cell.length_c            84.464 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1X8K 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O GLU 118 A GLU 118 1_555 D CA CA . A CA 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? 
metalc ? metalc2 A OD1 ASN 121 A ASN 121 1_555 D CA CA . A CA 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? 
metalc ? metalc3 A OD1 ASP 122 A ASP 122 1_555 D CA CA . A CA 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? 
metalc ? metalc4 A SG CYS 318 A CYS 318 1_555 C HG EMC . A EMC 1103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.828 ? 
metalc ? metalc5 B O GLU 118 B GLU 118 1_555 G CA CA . B CA 2204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? 
metalc ? metalc6 B OD1 ASN 121 B ASN 121 1_555 G CA CA . B CA 2204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.554 ? 
metalc ? metalc7 B OD1 ASP 122 B ASP 122 1_555 G CA CA . B CA 2204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.598 ? 
metalc ? metalc8 B SG CYS 318 B CYS 318 1_555 F HG EMC . B EMC 2203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.759 ? 
#
_chem_comp.formula           'C20 H28' 
_chem_comp.formula_weight    268.436 
_chem_comp.id                ANR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              ANHYDRORETINOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     (6E)-6-[(2E,4E,6E)-3,7-DIMETHYLNONA-2,4,6,8-TETRAENYLIDENE]-1,5,5-TRIMETHYLCYCLOHEXENE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C15 C14 ANR doub 57 n n 
C15 H151 ANR sing 58 n n 
C15 H152 ANR sing 59 n n 
C14 C13 ANR sing 60 n n 
C14 H14 ANR sing 61 n n 
C13 C20 ANR sing 62 n n 
C13 C12 ANR doub 63 e n 
C20 H201 ANR sing 64 n n 
C20 H202 ANR sing 65 n n 
C20 H203 ANR sing 66 n n 
C12 C11 ANR sing 67 n n 
C12 H12 ANR sing 68 n n 
C11 C10 ANR doub 69 e n 
C11 H11 ANR sing 70 n n 
C10 C9 ANR sing 71 n n 
C10 H10 ANR sing 72 n n 
C9 C19 ANR sing 73 n n 
C9 C8 ANR doub 74 e n 
C19 H191 ANR sing 75 n n 
C19 H192 ANR sing 76 n n 
C19 H193 ANR sing 77 n n 
C8 C7 ANR sing 78 n n 
C8 H8 ANR sing 79 n n 
C7 C6 ANR doub 80 z n 
C7 H7 ANR sing 81 n n 
C6 C1 ANR sing 82 n n 
C6 C5 ANR sing 83 n n 
C1 C17 ANR sing 84 n n 
C1 C18 ANR sing 85 n n 
C1 C2 ANR sing 86 n n 
C17 H171 ANR sing 87 n n 
C17 H172 ANR sing 88 n n 
C17 H173 ANR sing 89 n n 
C18 H181 ANR sing 90 n n 
C18 H182 ANR sing 91 n n 
C18 H183 ANR sing 92 n n 
C2 C3 ANR sing 93 n n 
C2 H21 ANR sing 94 n n 
C2 H22 ANR sing 95 n n 
C3 C4 ANR sing 96 n n 
C3 H31 ANR sing 97 n n 
C3 H32 ANR sing 98 n n 
C4 C5 ANR doub 99 n n 
C4 H4 ANR sing 100 n n 
C5 C16 ANR sing 101 n n 
C16 H161 ANR sing 102 n n 
C16 H162 ANR sing 103 n n 
C16 H163 ANR sing 104 n n 
#
_atom_sites.entry_id                     1X8K 
_atom_sites.fract_transf_matrix[1][1]    0.012302 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004639 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015001 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012653 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 EMC A 1 1103 1103 EMC EMC . 
D 3 CA A 1 1104 1104 CA CA . 
E 4 ANR A 1 1102 1102 ANR ANR . 
F 2 EMC B 1 2203 2203 EMC EMC . 
G 3 CA B 1 2204 2204 CA CA . 
H 5 A3P B 1 1101 1101 A3P A3P . 
I 5 A3P B 1 2201 2201 A3P A3P . 
J 4 ANR B 1 2202 2202 ANR ANR . 
K 6 HOH A 1 1105 1 HOH HOH . 
K 6 HOH A 2 1106 3 HOH HOH . 
K 6 HOH A 3 1107 5 HOH HOH . 
K 6 HOH A 4 1108 7 HOH HOH . 
K 6 HOH A 5 1109 9 HOH HOH . 
K 6 HOH A 6 1110 12 HOH HOH . 
K 6 HOH A 7 1111 17 HOH HOH . 
K 6 HOH A 8 1112 19 HOH HOH . 
K 6 HOH A 9 1113 20 HOH HOH . 
K 6 HOH A 10 1114 21 HOH HOH . 
K 6 HOH A 11 1115 24 HOH HOH . 
K 6 HOH A 12 1116 26 HOH HOH . 
K 6 HOH A 13 1117 27 HOH HOH . 
K 6 HOH A 14 1118 29 HOH HOH . 
K 6 HOH A 15 1119 31 HOH HOH . 
K 6 HOH A 16 1120 35 HOH HOH . 
K 6 HOH A 17 1121 36 HOH HOH . 
K 6 HOH A 18 1122 37 HOH HOH . 
K 6 HOH A 19 1123 38 HOH HOH . 
K 6 HOH A 20 1124 39 HOH HOH . 
K 6 HOH A 21 1125 41 HOH HOH . 
K 6 HOH A 22 1126 42 HOH HOH . 
K 6 HOH A 23 1127 44 HOH HOH . 
K 6 HOH A 24 1128 45 HOH HOH . 
K 6 HOH A 25 1129 47 HOH HOH . 
K 6 HOH A 26 1130 48 HOH HOH . 
K 6 HOH A 27 1131 50 HOH HOH . 
K 6 HOH A 28 1132 52 HOH HOH . 
K 6 HOH A 29 1133 53 HOH HOH . 
K 6 HOH A 30 1134 54 HOH HOH . 
K 6 HOH A 31 1135 57 HOH HOH . 
K 6 HOH A 32 1136 58 HOH HOH . 
K 6 HOH A 33 1137 59 HOH HOH . 
K 6 HOH A 34 1138 60 HOH HOH . 
K 6 HOH A 35 1139 61 HOH HOH . 
K 6 HOH A 36 1140 64 HOH HOH . 
K 6 HOH A 37 1141 67 HOH HOH . 
K 6 HOH A 38 1142 68 HOH HOH . 
K 6 HOH A 39 1143 70 HOH HOH . 
K 6 HOH A 40 1144 71 HOH HOH . 
K 6 HOH A 41 1145 73 HOH HOH . 
L 6 HOH B 1 2205 2 HOH HOH . 
L 6 HOH B 2 2206 4 HOH HOH . 
L 6 HOH B 3 2207 6 HOH HOH . 
L 6 HOH B 4 2208 8 HOH HOH . 
L 6 HOH B 5 2209 10 HOH HOH . 
L 6 HOH B 6 2210 11 HOH HOH . 
L 6 HOH B 7 2211 13 HOH HOH . 
L 6 HOH B 8 2212 14 HOH HOH . 
L 6 HOH B 9 2213 15 HOH HOH . 
L 6 HOH B 10 2214 16 HOH HOH . 
L 6 HOH B 11 2215 18 HOH HOH . 
L 6 HOH B 12 2216 22 HOH HOH . 
L 6 HOH B 13 2217 23 HOH HOH . 
L 6 HOH B 14 2218 25 HOH HOH . 
L 6 HOH B 15 2219 28 HOH HOH . 
L 6 HOH B 16 2220 30 HOH HOH . 
L 6 HOH B 17 2221 32 HOH HOH . 
L 6 HOH B 18 2222 33 HOH HOH . 
L 6 HOH B 19 2223 34 HOH HOH . 
L 6 HOH B 20 2224 40 HOH HOH . 
L 6 HOH B 21 2225 43 HOH HOH . 
L 6 HOH B 22 2226 46 HOH HOH . 
L 6 HOH B 23 2227 49 HOH HOH . 
L 6 HOH B 24 2228 51 HOH HOH . 
L 6 HOH B 25 2229 55 HOH HOH . 
L 6 HOH B 26 2230 56 HOH HOH . 
L 6 HOH B 27 2231 62 HOH HOH . 
L 6 HOH B 28 2232 63 HOH HOH . 
L 6 HOH B 29 2233 65 HOH HOH . 
L 6 HOH B 30 2234 66 HOH HOH . 
L 6 HOH B 31 2235 69 HOH HOH . 
L 6 HOH B 32 2236 72 HOH HOH . 
L 6 HOH B 33 2237 74 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C15 ANR . . . E 4 13.083 -3.006 38.821 1 55.03 ? C15 ANR 1102 A 1 
HETATM 2 C C14 ANR . . . E 4 14.354 -3.239 39.274 1 57.09 ? C14 ANR 1102 A 1 
HETATM 3 C C13 ANR . . . E 4 14.883 -3.759 40.461 1 57.86 ? C13 ANR 1102 A 1 
HETATM 4 C C20 ANR . . . E 4 14.084 -3.835 41.799 1 57.73 ? C20 ANR 1102 A 1 
HETATM 5 C C12 ANR . . . E 4 16.19 -4.235 40.435 1 59 ? C12 ANR 1102 A 1 
HETATM 6 C C11 ANR . . . E 4 16.976 -4.813 41.426 1 60.13 ? C11 ANR 1102 A 1 
HETATM 7 C C10 ANR . . . E 4 17.507 -6.074 41.306 1 59.86 ? C10 ANR 1102 A 1 
HETATM 8 C C9 ANR . . . E 4 18.286 -6.911 42.076 1 59.13 ? C9 ANR 1102 A 1 
HETATM 9 C C19 ANR . . . E 4 17.659 -7.829 43.171 1 58.34 ? C19 ANR 1102 A 1 
HETATM 10 C C8 ANR . . . E 4 19.643 -6.913 41.815 1 57.73 ? C8 ANR 1102 A 1 
HETATM 11 C C7 ANR . . . E 4 20.613 -7.672 42.398 1 56.55 ? C7 ANR 1102 A 1 
HETATM 12 C C6 ANR . . . E 4 21.968 -8.066 42.304 1 55.56 ? C6 ANR 1102 A 1 
HETATM 13 C C1 ANR . . . E 4 23.157 -7.585 41.257 1 55.07 ? C1 ANR 1102 A 1 
HETATM 14 C C17 ANR . . . E 4 23.48 -6.062 41.396 1 55.75 ? C17 ANR 1102 A 1 
HETATM 15 C C18 ANR . . . E 4 22.956 -8.03 39.797 1 55.42 ? C18 ANR 1102 A 1 
HETATM 16 C C2 ANR . . . E 4 24.598 -8.183 41.403 1 53.87 ? C2 ANR 1102 A 1 
HETATM 17 C C3 ANR . . . E 4 24.826 -9.191 42.535 1 55.4 ? C3 ANR 1102 A 1 
HETATM 18 C C4 ANR . . . E 4 23.58 -9.484 43.381 1 55.18 ? C4 ANR 1102 A 1 
HETATM 19 C C5 ANR . . . E 4 22.312 -8.991 43.284 1 55.2 ? C5 ANR 1102 A 1 
HETATM 20 C C16 ANR . . . E 4 21.391 -9.597 44.388 1 54.71 ? C16 ANR 1102 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           280 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           20 
#