data_1X9R # _model_server_result.job_id 4kXThBaggCcTc5_6Oxzhjw _model_server_result.datetime_utc '2024-10-10 06:30:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1x9r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":116}' # _entry.id 1X9R # _exptl.entry_id 1X9R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 63.546 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COPPER (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1X9R _cell.length_a 92.69 _cell.length_b 92.69 _cell.length_c 47.31 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1X9R _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 58 A CYS 57 1_555 A SG CYS 92 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 B SG CYS 58 B CYS 57 1_555 B SG CYS 92 B CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc1 A ND1 HIS 45 A HIS 44 1_555 C CU CU . A CU 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.885 ? metalc ? metalc2 A SG CYS 86 A CYS 85 1_555 C CU CU . A CU 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc3 A ND1 HIS 91 A HIS 90 1_555 C CU CU . A CU 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? metalc ? metalc4 A OE1 GLN 96 A GLN 95 1_555 C CU CU . A CU 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc5 B ND1 HIS 45 B HIS 44 1_555 D CU CU . B CU 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc6 B SG CYS 86 B CYS 85 1_555 D CU CU . B CU 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc7 B ND1 HIS 91 B HIS 90 1_555 D CU CU . B CU 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? metalc ? metalc8 B OE1 GLN 96 B GLN 95 1_555 D CU CU . B CU 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? # _chem_comp.formula 'Cu 2' _chem_comp.formula_weight 63.546 _chem_comp.id CU _chem_comp.mon_nstd_flag . _chem_comp.name 'COPPER (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1X9R _atom_sites.fract_transf_matrix[1][1] 0.010789 _atom_sites.fract_transf_matrix[1][2] 0.006229 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012458 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021137 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CU A 1 116 105 CU CU . D 2 CU B 1 116 105 CU CU . E 3 HOH A 1 117 4 HOH HOH . E 3 HOH A 2 118 7 HOH HOH . E 3 HOH A 3 119 9 HOH HOH . E 3 HOH A 4 120 16 HOH HOH . E 3 HOH A 5 121 29 HOH HOH . E 3 HOH A 6 122 30 HOH HOH . E 3 HOH A 7 123 32 HOH HOH . E 3 HOH A 8 124 35 HOH HOH . E 3 HOH A 9 125 36 HOH HOH . E 3 HOH A 10 126 38 HOH HOH . E 3 HOH A 11 127 42 HOH HOH . E 3 HOH A 12 128 45 HOH HOH . E 3 HOH A 13 129 46 HOH HOH . E 3 HOH A 14 130 48 HOH HOH . E 3 HOH A 15 131 49 HOH HOH . E 3 HOH A 16 132 53 HOH HOH . E 3 HOH A 17 133 54 HOH HOH . E 3 HOH A 18 134 56 HOH HOH . E 3 HOH A 19 135 57 HOH HOH . E 3 HOH A 20 136 58 HOH HOH . E 3 HOH A 21 137 61 HOH HOH . E 3 HOH A 22 138 63 HOH HOH . E 3 HOH A 23 139 66 HOH HOH . E 3 HOH A 24 140 67 HOH HOH . E 3 HOH A 25 141 70 HOH HOH . E 3 HOH A 26 142 72 HOH HOH . E 3 HOH A 27 143 73 HOH HOH . E 3 HOH A 28 144 75 HOH HOH . E 3 HOH A 29 145 78 HOH HOH . E 3 HOH A 30 146 81 HOH HOH . E 3 HOH A 31 147 82 HOH HOH . E 3 HOH A 32 148 84 HOH HOH . E 3 HOH A 33 149 87 HOH HOH . E 3 HOH A 34 150 88 HOH HOH . E 3 HOH A 35 151 90 HOH HOH . E 3 HOH A 36 152 91 HOH HOH . E 3 HOH A 37 153 92 HOH HOH . E 3 HOH A 38 154 93 HOH HOH . E 3 HOH A 39 155 105 HOH HOH . E 3 HOH A 40 156 107 HOH HOH . E 3 HOH A 41 157 113 HOH HOH . E 3 HOH A 42 158 114 HOH HOH . E 3 HOH A 43 159 119 HOH HOH . E 3 HOH A 44 160 123 HOH HOH . E 3 HOH A 45 161 125 HOH HOH . E 3 HOH A 46 162 129 HOH HOH . E 3 HOH A 47 163 130 HOH HOH . E 3 HOH A 48 164 134 HOH HOH . E 3 HOH A 49 165 137 HOH HOH . E 3 HOH A 50 166 140 HOH HOH . E 3 HOH A 51 167 143 HOH HOH . E 3 HOH A 52 168 144 HOH HOH . E 3 HOH A 53 169 145 HOH HOH . E 3 HOH A 54 170 151 HOH HOH . E 3 HOH A 55 171 152 HOH HOH . E 3 HOH A 56 172 153 HOH HOH . E 3 HOH A 57 173 156 HOH HOH . E 3 HOH A 58 174 157 HOH HOH . E 3 HOH A 59 175 159 HOH HOH . E 3 HOH A 60 176 160 HOH HOH . E 3 HOH A 61 177 161 HOH HOH . E 3 HOH A 62 178 162 HOH HOH . E 3 HOH A 63 179 163 HOH HOH . E 3 HOH A 64 180 164 HOH HOH . E 3 HOH A 65 181 168 HOH HOH . E 3 HOH A 66 182 169 HOH HOH . E 3 HOH A 67 183 174 HOH HOH . E 3 HOH A 68 184 176 HOH HOH . E 3 HOH A 69 185 177 HOH HOH . E 3 HOH A 70 186 182 HOH HOH . E 3 HOH A 71 187 183 HOH HOH . E 3 HOH A 72 188 184 HOH HOH . E 3 HOH A 73 189 187 HOH HOH . E 3 HOH A 74 190 189 HOH HOH . E 3 HOH A 75 191 192 HOH HOH . E 3 HOH A 76 192 193 HOH HOH . E 3 HOH A 77 193 197 HOH HOH . E 3 HOH A 78 194 198 HOH HOH . E 3 HOH A 79 195 200 HOH HOH . E 3 HOH A 80 196 201 HOH HOH . E 3 HOH A 81 197 202 HOH HOH . E 3 HOH A 82 198 204 HOH HOH . E 3 HOH A 83 199 206 HOH HOH . E 3 HOH A 84 200 207 HOH HOH . E 3 HOH A 85 201 209 HOH HOH . E 3 HOH A 86 202 211 HOH HOH . E 3 HOH A 87 203 212 HOH HOH . E 3 HOH A 88 204 213 HOH HOH . E 3 HOH A 89 205 216 HOH HOH . E 3 HOH A 90 206 217 HOH HOH . E 3 HOH A 91 207 219 HOH HOH . E 3 HOH A 92 208 220 HOH HOH . E 3 HOH A 93 209 223 HOH HOH . E 3 HOH A 94 210 228 HOH HOH . E 3 HOH A 95 211 229 HOH HOH . E 3 HOH A 96 212 231 HOH HOH . E 3 HOH A 97 213 233 HOH HOH . E 3 HOH A 98 214 234 HOH HOH . E 3 HOH A 99 215 242 HOH HOH . E 3 HOH A 100 216 244 HOH HOH . E 3 HOH A 101 217 246 HOH HOH . E 3 HOH A 102 218 248 HOH HOH . E 3 HOH A 103 219 249 HOH HOH . E 3 HOH A 104 220 250 HOH HOH . E 3 HOH A 105 221 251 HOH HOH . E 3 HOH A 106 222 252 HOH HOH . E 3 HOH A 107 223 253 HOH HOH . E 3 HOH A 108 224 255 HOH HOH . E 3 HOH A 109 225 257 HOH HOH . E 3 HOH A 110 226 258 HOH HOH . E 3 HOH A 111 227 260 HOH HOH . E 3 HOH A 112 228 261 HOH HOH . E 3 HOH A 113 229 264 HOH HOH . E 3 HOH A 114 230 266 HOH HOH . E 3 HOH A 115 231 268 HOH HOH . E 3 HOH A 116 232 271 HOH HOH . E 3 HOH A 117 233 272 HOH HOH . E 3 HOH A 118 234 275 HOH HOH . E 3 HOH A 119 235 277 HOH HOH . E 3 HOH A 120 236 278 HOH HOH . E 3 HOH A 121 237 279 HOH HOH . E 3 HOH A 122 238 284 HOH HOH . E 3 HOH A 123 239 287 HOH HOH . E 3 HOH A 124 240 288 HOH HOH . E 3 HOH A 125 241 289 HOH HOH . E 3 HOH A 126 242 291 HOH HOH . E 3 HOH A 127 243 292 HOH HOH . E 3 HOH A 128 244 294 HOH HOH . E 3 HOH A 129 245 298 HOH HOH . E 3 HOH A 130 246 299 HOH HOH . E 3 HOH A 131 247 301 HOH HOH . E 3 HOH A 132 248 303 HOH HOH . E 3 HOH A 133 249 306 HOH HOH . E 3 HOH A 134 250 314 HOH HOH . E 3 HOH A 135 251 324 HOH HOH . E 3 HOH A 136 252 326 HOH HOH . E 3 HOH A 137 253 327 HOH HOH . E 3 HOH A 138 254 330 HOH HOH . E 3 HOH A 139 255 332 HOH HOH . E 3 HOH A 140 256 333 HOH HOH . E 3 HOH A 141 257 339 HOH HOH . F 3 HOH B 1 117 1 HOH HOH . F 3 HOH B 2 118 2 HOH HOH . F 3 HOH B 3 119 6 HOH HOH . F 3 HOH B 4 120 15 HOH HOH . F 3 HOH B 5 121 17 HOH HOH . F 3 HOH B 6 122 18 HOH HOH . F 3 HOH B 7 123 19 HOH HOH . F 3 HOH B 8 124 22 HOH HOH . F 3 HOH B 9 125 23 HOH HOH . F 3 HOH B 10 126 24 HOH HOH . F 3 HOH B 11 127 26 HOH HOH . F 3 HOH B 12 128 27 HOH HOH . F 3 HOH B 13 129 28 HOH HOH . F 3 HOH B 14 130 31 HOH HOH . F 3 HOH B 15 131 40 HOH HOH . F 3 HOH B 16 132 47 HOH HOH . F 3 HOH B 17 133 50 HOH HOH . F 3 HOH B 18 134 51 HOH HOH . F 3 HOH B 19 135 59 HOH HOH . F 3 HOH B 20 136 62 HOH HOH . F 3 HOH B 21 137 64 HOH HOH . F 3 HOH B 22 138 68 HOH HOH . F 3 HOH B 23 139 69 HOH HOH . F 3 HOH B 24 140 76 HOH HOH . F 3 HOH B 25 141 77 HOH HOH . F 3 HOH B 26 142 79 HOH HOH . F 3 HOH B 27 143 80 HOH HOH . F 3 HOH B 28 144 83 HOH HOH . F 3 HOH B 29 145 97 HOH HOH . F 3 HOH B 30 146 109 HOH HOH . F 3 HOH B 31 147 110 HOH HOH . F 3 HOH B 32 148 111 HOH HOH . F 3 HOH B 33 149 112 HOH HOH . F 3 HOH B 34 150 116 HOH HOH . F 3 HOH B 35 151 117 HOH HOH . F 3 HOH B 36 152 118 HOH HOH . F 3 HOH B 37 153 121 HOH HOH . F 3 HOH B 38 154 122 HOH HOH . F 3 HOH B 39 155 124 HOH HOH . F 3 HOH B 40 156 127 HOH HOH . F 3 HOH B 41 157 128 HOH HOH . F 3 HOH B 42 158 131 HOH HOH . F 3 HOH B 43 159 132 HOH HOH . F 3 HOH B 44 160 133 HOH HOH . F 3 HOH B 45 161 135 HOH HOH . F 3 HOH B 46 162 139 HOH HOH . F 3 HOH B 47 163 141 HOH HOH . F 3 HOH B 48 164 142 HOH HOH . F 3 HOH B 49 165 146 HOH HOH . F 3 HOH B 50 166 148 HOH HOH . F 3 HOH B 51 167 149 HOH HOH . F 3 HOH B 52 168 154 HOH HOH . F 3 HOH B 53 169 155 HOH HOH . F 3 HOH B 54 170 158 HOH HOH . F 3 HOH B 55 171 165 HOH HOH . F 3 HOH B 56 172 166 HOH HOH . F 3 HOH B 57 173 167 HOH HOH . F 3 HOH B 58 174 170 HOH HOH . F 3 HOH B 59 175 171 HOH HOH . F 3 HOH B 60 176 172 HOH HOH . F 3 HOH B 61 177 173 HOH HOH . F 3 HOH B 62 178 175 HOH HOH . F 3 HOH B 63 179 178 HOH HOH . F 3 HOH B 64 180 179 HOH HOH . F 3 HOH B 65 181 180 HOH HOH . F 3 HOH B 66 182 181 HOH HOH . F 3 HOH B 67 183 186 HOH HOH . F 3 HOH B 68 184 188 HOH HOH . F 3 HOH B 69 185 190 HOH HOH . F 3 HOH B 70 186 191 HOH HOH . F 3 HOH B 71 187 194 HOH HOH . F 3 HOH B 72 188 195 HOH HOH . F 3 HOH B 73 189 196 HOH HOH . F 3 HOH B 74 190 203 HOH HOH . F 3 HOH B 75 191 205 HOH HOH . F 3 HOH B 76 192 208 HOH HOH . F 3 HOH B 77 193 221 HOH HOH . F 3 HOH B 78 194 222 HOH HOH . F 3 HOH B 79 195 224 HOH HOH . F 3 HOH B 80 196 225 HOH HOH . F 3 HOH B 81 197 226 HOH HOH . F 3 HOH B 82 198 227 HOH HOH . F 3 HOH B 83 199 230 HOH HOH . F 3 HOH B 84 200 232 HOH HOH . F 3 HOH B 85 201 235 HOH HOH . F 3 HOH B 86 202 237 HOH HOH . F 3 HOH B 87 203 240 HOH HOH . F 3 HOH B 88 204 243 HOH HOH . F 3 HOH B 89 205 245 HOH HOH . F 3 HOH B 90 206 256 HOH HOH . F 3 HOH B 91 207 259 HOH HOH . F 3 HOH B 92 208 262 HOH HOH . F 3 HOH B 93 209 265 HOH HOH . F 3 HOH B 94 210 267 HOH HOH . F 3 HOH B 95 211 269 HOH HOH . F 3 HOH B 96 212 270 HOH HOH . F 3 HOH B 97 213 273 HOH HOH . F 3 HOH B 98 214 274 HOH HOH . F 3 HOH B 99 215 276 HOH HOH . F 3 HOH B 100 216 280 HOH HOH . F 3 HOH B 101 217 281 HOH HOH . F 3 HOH B 102 218 282 HOH HOH . F 3 HOH B 103 219 283 HOH HOH . F 3 HOH B 104 220 285 HOH HOH . F 3 HOH B 105 221 286 HOH HOH . F 3 HOH B 106 222 290 HOH HOH . F 3 HOH B 107 223 293 HOH HOH . F 3 HOH B 108 224 296 HOH HOH . F 3 HOH B 109 225 297 HOH HOH . F 3 HOH B 110 226 300 HOH HOH . F 3 HOH B 111 227 304 HOH HOH . F 3 HOH B 112 228 305 HOH HOH . F 3 HOH B 113 229 307 HOH HOH . F 3 HOH B 114 230 308 HOH HOH . F 3 HOH B 115 231 309 HOH HOH . F 3 HOH B 116 232 310 HOH HOH . F 3 HOH B 117 233 311 HOH HOH . F 3 HOH B 118 234 312 HOH HOH . F 3 HOH B 119 235 313 HOH HOH . F 3 HOH B 120 236 315 HOH HOH . F 3 HOH B 121 237 316 HOH HOH . F 3 HOH B 122 238 319 HOH HOH . F 3 HOH B 123 239 320 HOH HOH . F 3 HOH B 124 240 321 HOH HOH . F 3 HOH B 125 241 323 HOH HOH . F 3 HOH B 126 242 329 HOH HOH . F 3 HOH B 127 243 331 HOH HOH . F 3 HOH B 128 244 334 HOH HOH . F 3 HOH B 129 245 336 HOH HOH . F 3 HOH B 130 246 337 HOH HOH . F 3 HOH B 131 247 338 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CU _atom_site.label_atom_id CU _atom_site.label_comp_id CU _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 6.81 _atom_site.Cartn_y 33.453 _atom_site.Cartn_z 18.15 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 17.06 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CU _atom_site.auth_comp_id CU _atom_site.auth_seq_id 116 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #