data_1X9S # _model_server_result.job_id zip9aatfIuLBAcTCLhUkhw _model_server_result.datetime_utc '2025-08-18 19:46:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1x9s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":3001}' # _entry.id 1X9S # _exptl.entry_id 1X9S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1X9S _cell.length_a 104.579 _cell.length_b 211.103 _cell.length_c 51.991 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1X9S _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A O3' DA 21 P DA 21 1_555 A P 2DT 22 P 2DT 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.606 ? metalc ? metalc1 C OD1 ASP 5 A ASP 5 1_555 E MG MG . A MG 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? hydrog 'DG-DC PAIR' hydrog1 A N2 DG 12 P DG 12 1_555 B O2 DC 15 T DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N1 DG 13 P DG 13 1_555 B N3 DC 14 T DC 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A N2 DG 13 P DG 13 1_555 B O2 DC 14 T DC 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A O6 DG 13 P DG 13 1_555 B N4 DC 14 T DC 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N3 DT 14 P DT 14 1_555 B N1 DA 13 T DA 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O4 DT 14 P DT 14 1_555 B N6 DA 13 T DA 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N1 DA 15 P DA 15 1_555 B N3 DT 12 T DT 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N6 DA 15 P DA 15 1_555 B O4 DT 12 T DT 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N1 DG 16 P DG 16 1_555 B N3 DC 11 T DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N2 DG 16 P DG 16 1_555 B O2 DC 11 T DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A O6 DG 16 P DG 16 1_555 B N4 DC 11 T DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N3 DT 17 P DT 17 1_555 B N1 DA 10 T DA 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A O4 DT 17 P DT 17 1_555 B N6 DA 10 T DA 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N1 DG 18 P DG 18 1_555 B N3 DC 9 T DC 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A N2 DG 18 P DG 18 1_555 B O2 DC 9 T DC 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A O6 DG 18 P DG 18 1_555 B N4 DC 9 T DC 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A N3 DT 19 P DT 19 1_555 B N1 DA 8 T DA 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A O4 DT 19 P DT 19 1_555 B N6 DA 8 T DA 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A N1 DG 20 P DG 20 1_555 B N3 DC 7 T DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 A N2 DG 20 P DG 20 1_555 B O2 DC 7 T DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 A O6 DG 20 P DG 20 1_555 B N4 DC 7 T DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 A N1 DA 21 P DA 21 1_555 B N3 DT 6 T DT 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 A N6 DA 21 P DA 21 1_555 B O4 DT 6 T DT 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 A N3 2DT 22 P 2DT 22 1_555 B N1 DA 5 T DA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 A O4 2DT 22 P 2DT 22 1_555 B N6 DA 5 T DA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1X9S _atom_sites.fract_transf_matrix[1][1] 0.009562 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004737 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019234 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 MG A 1 3001 3001 MG MG . F 6 HOH T 1 4020 4020 HOH HOH . F 6 HOH T 2 4027 4027 HOH HOH . F 6 HOH T 3 4030 4030 HOH HOH . F 6 HOH T 4 4049 4049 HOH HOH . F 6 HOH T 5 4055 4055 HOH HOH . F 6 HOH T 6 4057 4057 HOH HOH . G 6 HOH A 1 4001 4001 HOH HOH . G 6 HOH A 2 4002 4002 HOH HOH . G 6 HOH A 3 4003 4003 HOH HOH . G 6 HOH A 4 4004 4004 HOH HOH . G 6 HOH A 5 4005 4005 HOH HOH . G 6 HOH A 6 4007 4007 HOH HOH . G 6 HOH A 7 4008 4008 HOH HOH . G 6 HOH A 8 4009 4009 HOH HOH . G 6 HOH A 9 4010 4010 HOH HOH . G 6 HOH A 10 4011 4011 HOH HOH . G 6 HOH A 11 4012 4012 HOH HOH . G 6 HOH A 12 4013 4013 HOH HOH . G 6 HOH A 13 4015 4015 HOH HOH . G 6 HOH A 14 4017 4017 HOH HOH . G 6 HOH A 15 4018 4018 HOH HOH . G 6 HOH A 16 4021 4021 HOH HOH . G 6 HOH A 17 4023 4023 HOH HOH . G 6 HOH A 18 4024 4024 HOH HOH . G 6 HOH A 19 4025 4025 HOH HOH . G 6 HOH A 20 4026 4026 HOH HOH . G 6 HOH A 21 4031 4031 HOH HOH . G 6 HOH A 22 4032 4032 HOH HOH . G 6 HOH A 23 4033 4033 HOH HOH . G 6 HOH A 24 4034 4034 HOH HOH . G 6 HOH A 25 4036 4036 HOH HOH . G 6 HOH A 26 4038 4038 HOH HOH . G 6 HOH A 27 4039 4039 HOH HOH . G 6 HOH A 28 4040 4040 HOH HOH . G 6 HOH A 29 4041 4041 HOH HOH . G 6 HOH A 30 4042 4042 HOH HOH . G 6 HOH A 31 4043 4043 HOH HOH . G 6 HOH A 32 4044 4044 HOH HOH . G 6 HOH A 33 4045 4045 HOH HOH . G 6 HOH A 34 4046 4046 HOH HOH . G 6 HOH A 35 4047 4047 HOH HOH . G 6 HOH A 36 4048 4048 HOH HOH . G 6 HOH A 37 4050 4050 HOH HOH . G 6 HOH A 38 4051 4051 HOH HOH . G 6 HOH A 39 4052 4052 HOH HOH . G 6 HOH A 40 4053 4053 HOH HOH . G 6 HOH A 41 4056 4056 HOH HOH . G 6 HOH A 42 4058 4058 HOH HOH . G 6 HOH A 43 4059 4059 HOH HOH . H 6 HOH B 1 4028 4028 HOH HOH . H 6 HOH B 2 4035 4035 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 5 _atom_site.Cartn_x 77.805 _atom_site.Cartn_y 22.96 _atom_site.Cartn_z 7.676 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 26.56 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 3001 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 44 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #