data_1X9T # _model_server_result.job_id FZk0M-mg2OyFU1GJyuMZ2Q _model_server_result.datetime_utc '2025-03-04 14:03:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1x9t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":2000}' # _entry.id 1X9T # _exptl.entry_id 1X9T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 336.554 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-DODECYL-N,N-DIMETHYL-3-AMMONIO-1-PROPANESULFONATE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.22 _cell.angle_gamma 90 _cell.entry_id 1X9T _cell.length_a 438.37 _cell.length_b 299.825 _cell.length_c 419.583 _cell.Z_PDB 240 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1X9T _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? 'complete icosahedral assembly' 120 'complete icosahedral assembly' 1 ? dimeric 2 'icosahedral asymmetric unit' 2 ? decameric 10 'icosahedral pentamer' 3 ? dodecameric 12 'icosahedral 23 hexamer' 4 ? dimeric 2 'icosahedral asymmetric unit, std point frame' 5 ? 120-meric 120 'crystal asymmetric unit, crystal frame' 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D 1 (1-60) A,B,C,D 2 1 A,B,C,D 3 (1-5) A,B,C,D 4 (1,2,6,10,23,24) A,B,C,D 5 P A,B,C,D 6 (X0)(1-60) # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] P 'transform to point frame' ? ? -0.591297 -0.285911 0.754071 -0.741822 -0.173945 -0.647644 0.316336 -0.942336 -0.109242 -25.24568 130.92688 -16.51795 X0 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'point symmetry operation' ? ? 0.319118 0.48681 -0.813129 -0.337591 0.8601 0.382441 0.885548 0.152461 0.438816 142.48943 -9.50758 -20.15926 3 'point symmetry operation' ? ? -0.782572 0.450084 -0.430123 -0.059424 0.633736 0.771264 0.619718 0.629129 -0.469198 199.72409 -73.49794 95.72627 4 'point symmetry operation' ? ? -0.782572 -0.059424 0.619718 0.450084 0.633736 0.629129 -0.430123 0.771264 -0.469198 92.60763 -103.53857 187.50672 5 'point symmetry operation' ? ? 0.319118 -0.337591 0.885548 0.48681 0.8601 0.152461 -0.813129 0.382441 0.438816 -30.82865 -58.11435 128.34463 6 'point symmetry operation' ? ? -0.799863 -0.59619 -0.069114 -0.59619 0.775995 0.205885 -0.069114 0.205885 -0.976132 164.39348 31.11223 207.66218 7 'point symmetry operation' ? ? -0.115186 -0.912701 0.392056 -0.269903 0.408591 0.871898 -0.955973 -0.005386 -0.293405 57.48308 -65.36687 215.53476 8 'point symmetry operation' ? ? 0.618547 -0.781315 -0.083352 0.54804 0.352969 0.758331 -0.563074 -0.514743 0.646519 41.84425 -125.28671 85.28474 9 'point symmetry operation' ? ? 0.387342 -0.383601 -0.838341 0.727269 0.685996 0.02213 0.566609 -0.618272 0.544696 139.08933 -65.84011 -3.08677 10 'point symmetry operation' ? ? -0.489283 -0.269188 -0.829542 0.020096 0.947441 -0.3193 0.871893 -0.172899 -0.458157 214.82892 30.81974 72.54664 11 'point symmetry operation' ? ? 0.100599 0.258073 0.960874 0.258073 -0.939486 0.22531 0.960874 0.22531 -0.161113 -19.40492 -45.56698 34.46516 12 'point symmetry operation' ? ? 0.79588 0.417438 0.438544 0.599041 -0.648068 -0.470275 0.087896 0.636988 -0.765846 -26.89471 -4.40412 172.48527 13 'point symmetry operation' ? ? 0.501409 0.813342 -0.295068 -0.006505 -0.337482 -0.941309 -0.865186 0.4739 -0.163926 73.70021 96.59477 194.39218 14 'point symmetry operation' ? ? -0.375865 0.898659 -0.226136 -0.72172 -0.436948 -0.53684 -0.581246 -0.038573 0.812813 143.36108 117.85266 69.91129 15 'point symmetry operation' ? ? -0.623579 0.555484 0.550079 -0.558201 -0.809007 0.18417 0.547321 -0.19221 0.814552 85.81894 29.99187 -28.92905 16 'point symmetry operation' ? ? -0.300736 0.338117 -0.891759 0.338117 -0.836509 -0.431195 -0.891759 -0.431195 0.137246 204.6993 14.41735 165.97922 17 'point symmetry operation' ? ? -0.999812 0.008454 -0.017471 0.008454 -0.620623 -0.784063 -0.017471 -0.784063 0.620435 176.61007 79.24116 40.24579 18 'point symmetry operation' ? ? -0.337383 -0.482111 0.808543 -0.482111 -0.649222 -0.588285 0.808543 -0.588285 -0.013395 34.41931 102.15247 32.70337 19 'point symmetry operation' ? ? 0.771095 -0.455634 0.444759 -0.455634 -0.882783 -0.114419 0.444759 -0.114419 -0.888312 -25.37018 51.48862 153.77533 20 'point symmetry operation' ? ? 0.793744 0.051295 -0.606085 0.051295 -0.998533 -0.017332 -0.606085 -0.017332 -0.795211 79.86864 -2.73467 236.14433 21 'point symmetry operation' ? ? 0.016923 0.71427 -0.699665 0.711455 0.483073 0.510365 0.702528 -0.506417 -0.499996 157.33366 -114.27246 91.61846 22 'point symmetry operation' ? ? -0.855318 0.51591 -0.047619 0.51591 0.839645 -0.169802 -0.047619 -0.169802 -0.984327 167.05881 -27.77908 206.6156 23 'point symmetry operation' ? ? -0.489283 0.020096 0.871893 -0.269188 0.947441 -0.172899 -0.829542 -0.3193 -0.458157 41.23992 41.17274 221.28807 24 'point symmetry operation' ? ? 0.60918 -0.087973 0.788137 -0.558861 0.657489 0.505354 -0.562649 -0.74831 0.351365 -46.24557 -2.70608 115.35902 25 'point symmetry operation' ? ? 0.922033 0.34105 -0.183139 0.04721 0.370494 0.927634 0.384222 -0.863955 0.325507 25.50431 -98.7765 35.21879 26 'point symmetry operation' ? ? -0.39102 0.40013 0.828854 -0.892343 0.055777 -0.447898 -0.225448 -0.914759 0.335244 37.04428 123.6991 87.52341 27 'point symmetry operation' ? ? 0.474128 0.280167 0.834691 -0.700228 -0.454716 0.550377 0.533745 -0.845423 -0.019412 -39.18532 5.04863 57.33831 28 'point symmetry operation' ? ? 0.79588 0.599041 0.087896 0.417438 -0.648068 0.636988 0.438544 -0.470275 -0.765846 8.88246 -101.4984 141.82054 29 'point symmetry operation' ? ? 0.129585 0.916078 -0.379486 0.916078 -0.257074 -0.307757 -0.379486 -0.307757 -0.872511 114.81959 -48.69761 224.21853 30 'point symmetry operation' ? ? -0.60396 0.793144 0.078452 0.106589 0.177926 -0.978254 -0.789855 -0.582464 -0.192 132.22455 90.4821 190.66106 31 'point symmetry operation' ? ? -0.486253 -0.824321 0.289919 0.686636 -0.155242 0.710233 -0.540452 0.544422 0.641496 100.34405 -132.50054 83.82942 32 'point symmetry operation' ? ? 0.379848 -0.90151 0.207354 0.900472 0.309021 -0.306034 0.211816 0.302963 0.929165 33.05084 -47.5039 -11.28745 33 'point symmetry operation' ? ? 0.60918 -0.558861 -0.562649 -0.087973 0.657489 -0.74831 0.788137 0.505354 0.351365 91.56625 84.0352 -2.71769 34 'point symmetry operation' ? ? -0.115186 -0.269903 -0.955973 -0.912701 0.408591 -0.005386 0.392056 0.871898 -0.293405 195.02398 80.33418 97.6956 35 'point symmetry operation' ? ? -0.792202 -0.433966 -0.429057 -0.433966 -0.093704 0.896043 -0.429057 0.896043 -0.114094 200.44896 -53.49227 151.18465 36 'point symmetry operation' ? ? 0.86035 -0.29008 -0.419107 -0.505748 -0.383607 -0.7727 0.063372 0.876755 -0.476744 54.96586 123.0365 145.13527 37 'point symmetry operation' ? ? 0.001342 0.105432 -0.994426 -0.716154 -0.69395 -0.074541 -0.697941 0.712262 0.074574 188.76353 70.19694 155.4401 38 'point symmetry operation' ? ? -0.915777 -0.060276 -0.39714 -0.060276 -0.956862 0.284221 -0.39714 0.284221 0.872639 207.99923 -23.74695 47.71563 39 'point symmetry operation' ? ? -0.623579 -0.558201 0.547321 0.555484 -0.809007 -0.19221 0.550079 0.18417 0.814552 86.08986 -28.9679 -29.16659 40 'point symmetry operation' ? ? 0.474128 -0.700228 0.533745 0.280167 -0.454716 -0.845423 0.834691 0.550377 -0.019412 -8.48996 61.74926 31.04206 41 'point symmetry operation' ? ? 0.016923 0.711455 0.702528 0.71427 0.483073 -0.506417 -0.699665 0.510365 -0.499996 14.27259 -10.77969 214.21044 42 'point symmetry operation' ? ? 0.387342 0.727269 0.566609 -0.383601 0.685996 -0.618272 -0.838341 0.02213 0.544696 -4.24266 96.61244 119.74275 43 'point symmetry operation' ? ? 0.379848 0.900472 0.211816 -0.90151 0.309021 0.302963 0.207354 -0.306034 0.929165 32.61248 47.89502 -10.9031 44 'point symmetry operation' ? ? 0.004798 0.991703 0.12846 -0.123723 -0.126885 0.984171 0.992305 -0.020615 0.122087 73.90547 -89.60613 2.82101 45 'point symmetry operation' ? ? -0.219502 0.874884 0.431737 0.874884 -0.019315 0.483947 0.431737 0.483947 -0.761183 62.5708 -125.86909 141.94883 46 'point symmetry operation' ? ? -0.486253 0.686636 -0.540452 -0.824321 -0.155242 0.544422 0.289919 0.710233 0.641496 185.07809 16.50743 11.23836 47 'point symmetry operation' ? ? -0.865571 0.271464 0.420826 0.271464 -0.451809 0.849809 0.420826 0.849809 0.317379 120.15898 -110.44873 32.86403 48 'point symmetry operation' ? ? 0.004798 -0.123723 0.992305 0.991703 -0.126885 -0.020615 0.12846 0.984171 0.122087 -14.24021 -84.60385 78.34948 49 'point symmetry operation' ? ? 0.922033 0.04721 0.384222 0.34105 0.370494 -0.863955 -0.183139 0.927634 0.325507 -32.38438 58.32533 84.83535 50 'point symmetry operation' ? ? 0.618547 0.54804 -0.563074 -0.781315 0.352969 -0.514743 -0.083352 0.758331 0.646519 90.80111 120.81554 43.3584 51 'point symmetry operation' ? ? 0.86035 -0.505748 0.063372 -0.29008 -0.383607 0.876755 -0.419107 -0.7727 -0.476744 5.73807 -64.10597 187.29915 52 'point symmetry operation' ? ? 0.501409 -0.006505 -0.865186 0.813342 -0.337482 0.4739 -0.295068 -0.941309 -0.163926 131.85981 -119.46684 144.53807 53 'point symmetry operation' ? ? -0.60396 0.106589 -0.789855 0.793144 0.177926 -0.582464 0.078452 -0.978254 -0.192 220.80859 -9.9191 114.74824 54 'point symmetry operation' ? ? -0.928173 -0.322759 0.18526 -0.322759 0.450342 -0.832478 0.18526 -0.832478 -0.522169 149.66023 113.146 139.09819 55 'point symmetry operation' ? ? -0.02318 -0.701204 0.712583 -0.992229 0.103295 0.069369 -0.122249 -0.705438 -0.69815 16.73934 79.65667 183.93712 56 'point symmetry operation' ? ? -0.39102 -0.892343 -0.225448 0.40013 0.055777 -0.914759 0.828854 -0.447898 0.335244 144.5991 58.34082 -4.64139 57 'point symmetry operation' ? ? -0.02318 -0.992229 -0.122249 -0.701204 0.103295 -0.705438 0.712583 0.069369 -0.69815 101.91173 133.26573 110.9617 58 'point symmetry operation' ? ? 0.219313 -0.883338 -0.414265 -0.883338 -0.360061 0.300117 -0.414265 0.300117 -0.859252 110.507 46.59052 225.91194 59 'point symmetry operation' ? ? 0.001342 -0.716154 -0.697941 0.105432 -0.69395 0.712262 -0.994426 -0.074541 0.074574 158.50653 -81.90261 181.35201 60 'point symmetry operation' ? ? -0.375865 -0.72172 -0.581246 0.898659 -0.436948 -0.038573 -0.226136 -0.53684 0.812813 179.57661 -74.64053 38.86221 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C17 H38 N O3 S 1' _chem_comp.formula_weight 336.554 _chem_comp.id C15 _chem_comp.mon_nstd_flag . _chem_comp.name N-DODECYL-N,N-DIMETHYL-3-AMMONIO-1-PROPANESULFONATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 C15 sing 70 n n C1 S1 C15 sing 71 n n C1 H1C1 C15 sing 72 n n C1 H1C2 C15 sing 73 n n C2 C3 C15 sing 74 n n C2 H2C1 C15 sing 75 n n C2 H2C2 C15 sing 76 n n C3 N1 C15 sing 77 n n C3 H3C1 C15 sing 78 n n C3 H3C2 C15 sing 79 n n C5 C6 C15 sing 80 n n C5 H5C1 C15 sing 81 n n C5 H5C2 C15 sing 82 n n C5 H5C3 C15 sing 83 n n C6 C7 C15 sing 84 n n C6 H6C1 C15 sing 85 n n C6 H6C2 C15 sing 86 n n C7 C8 C15 sing 87 n n C7 H7C1 C15 sing 88 n n C7 H7C2 C15 sing 89 n n C8 C9 C15 sing 90 n n C8 H8C1 C15 sing 91 n n C8 H8C2 C15 sing 92 n n N1 C1N C15 sing 93 n n N1 C2N C15 sing 94 n n N1 C16 C15 sing 95 n n C1N HCN1 C15 sing 96 n n C1N HCN2 C15 sing 97 n n C1N HCN3 C15 sing 98 n n C2N HCN4 C15 sing 99 n n C2N HCN5 C15 sing 100 n n C2N HCN6 C15 sing 101 n n C9 C10 C15 sing 102 n n C9 H9C1 C15 sing 103 n n C9 H9C2 C15 sing 104 n n C10 C11 C15 sing 105 n n C10 H101 C15 sing 106 n n C10 H102 C15 sing 107 n n C11 C12 C15 sing 108 n n C11 H111 C15 sing 109 n n C11 H112 C15 sing 110 n n C12 C13 C15 sing 111 n n C12 H121 C15 sing 112 n n C12 H122 C15 sing 113 n n C13 C14 C15 sing 114 n n C13 H131 C15 sing 115 n n C13 H132 C15 sing 116 n n C14 C15 C15 sing 117 n n C14 H141 C15 sing 118 n n C14 H142 C15 sing 119 n n C15 C16 C15 sing 120 n n C15 H151 C15 sing 121 n n C15 H152 C15 sing 122 n n C16 H161 C15 sing 123 n n C16 H162 C15 sing 124 n n S1 O1S C15 doub 125 n n S1 O2S C15 doub 126 n n S1 O3S C15 sing 127 n n O3S H3S C15 sing 128 n n # _atom_sites.entry_id 1X9T _atom_sites.fract_transf_matrix[1][1] 0.002281 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000536 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.003335 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002448 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 C15 A 1 1014 1014 C15 C15 . D 3 C15 A 1 2000 2000 C15 C15 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 C15 . . . D 3 98.375 -105.755 94.677 1 138.13 ? C1 C15 2000 A 1 HETATM 2 C C2 C15 . . . D 3 97.548 -106.242 95.901 1 135.33 ? C2 C15 2000 A 1 HETATM 3 C C3 C15 . . . D 3 96.048 -106.378 95.527 1 132.94 ? C3 C15 2000 A 1 HETATM 4 C C5 C15 . . . D 3 88.41 -105.132 108.366 1 127.3 ? C5 C15 2000 A 1 HETATM 5 C C6 C15 . . . D 3 88.841 -106.535 108.085 1 128.23 ? C6 C15 2000 A 1 HETATM 6 C C7 C15 . . . D 3 89.423 -106.516 106.65 1 129.58 ? C7 C15 2000 A 1 HETATM 7 C C8 C15 . . . D 3 90.465 -107.582 106.218 1 130.8 ? C8 C15 2000 A 1 HETATM 8 N N1 C15 . . . D 3 95.179 -105.575 96.408 1 131.82 ? N1 C15 2000 A 1 HETATM 9 C C9 C15 . . . D 3 90.801 -107.177 104.735 1 132.49 ? C9 C15 2000 A 1 HETATM 10 C C10 C15 . . . D 3 90.002 -107.779 103.589 1 133.67 ? C10 C15 2000 A 1 HETATM 11 C C11 C15 . . . D 3 90.975 -108.337 102.463 1 134.75 ? C11 C15 2000 A 1 HETATM 12 C C12 C15 . . . D 3 91.684 -107.318 101.565 1 134.86 ? C12 C15 2000 A 1 HETATM 13 C C13 C15 . . . D 3 93.065 -107.723 100.87 1 134.43 ? C13 C15 2000 A 1 HETATM 14 C C14 C15 . . . D 3 93.758 -106.532 99.973 1 133.78 ? C14 C15 2000 A 1 HETATM 15 C C15 C15 . . . D 3 94.728 -106.931 98.687 1 132.83 ? C15 C15 2000 A 1 HETATM 16 C C16 C15 . . . D 3 94.217 -106.224 97.349 1 131.79 ? C16 C15 2000 A 1 HETATM 17 S S1 C15 . . . D 3 100.198 -105.506 94.789 1 139.72 ? S1 C15 2000 A 1 HETATM 18 O O1S C15 . . . D 3 100.521 -104.661 93.675 1 139.8 ? O1S C15 2000 A 1 HETATM 19 O O2S C15 . . . D 3 100.63 -104.795 95.955 1 139.41 ? O2S C15 2000 A 1 HETATM 20 O O3S C15 . . . D 3 101.072 -107.012 94.461 1 138.91 ? O3S C15 2000 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 20 #