data_1XA5 # _model_server_result.job_id g-vaSN8pXrpDfD0mUN7w-Q _model_server_result.datetime_utc '2024-12-26 18:42:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1xa5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":151}' # _entry.id 1XA5 # _exptl.entry_id 1XA5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1XA5 _cell.length_a 37.573 _cell.length_b 37.573 _cell.length_c 356.662 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XA5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 20 A ASP 20 1_555 B CA CA . A CA 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc2 A OD1 ASP 22 A ASP 22 1_555 B CA CA . A CA 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? metalc ? metalc3 A OD1 ASP 24 A ASP 24 1_555 B CA CA . A CA 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc4 A O THR 26 A THR 26 1_555 B CA CA . A CA 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc5 A OE2 GLU 31 A GLU 31 1_555 B CA CA . A CA 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc6 A OE1 GLU 31 A GLU 31 1_555 B CA CA . A CA 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.708 ? metalc ? metalc7 A OD1 ASP 56 A ASP 56 1_555 E CA CA . A CA 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc8 A OD1 ASP 58 A ASP 58 1_555 E CA CA . A CA 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc9 A OD1 ASN 60 A ASN 60 1_555 E CA CA . A CA 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? metalc ? metalc10 A O THR 62 A THR 62 1_555 E CA CA . A CA 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc11 A OE1 GLU 67 A GLU 67 1_555 E CA CA . A CA 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? metalc ? metalc12 A OE2 GLU 67 A GLU 67 1_555 E CA CA . A CA 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.618 ? metalc ? metalc13 A OD1 ASP 93 A ASP 93 1_555 C CA CA . A CA 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc14 A OD1 ASP 95 A ASP 95 1_555 C CA CA . A CA 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc15 A OD1 ASN 97 A ASN 97 1_555 C CA CA . A CA 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc16 A O TYR 99 A TYR 99 1_555 C CA CA . A CA 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc17 A OE2 GLU 104 A GLU 104 1_555 C CA CA . A CA 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc18 A OE1 GLU 104 A GLU 104 1_555 C CA CA . A CA 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.573 ? metalc ? metalc19 A OD1 ASP 129 A ASP 129 1_555 D CA CA . A CA 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc20 A OD1 ASP 131 A ASP 131 1_555 D CA CA . A CA 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.582 ? metalc ? metalc21 A OD1 ASP 133 A ASP 133 1_555 D CA CA . A CA 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc22 A O GLN 135 A GLN 135 1_555 D CA CA . A CA 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc23 A OE2 GLU 140 A GLU 140 1_555 D CA CA . A CA 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.543 ? metalc ? metalc24 A OE1 GLU 140 A GLU 140 1_555 D CA CA . A CA 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.567 ? metalc ? metalc25 B CA CA . A CA 149 1_555 G O HOH . A HOH 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.636 ? metalc ? metalc26 E CA CA . A CA 150 1_555 G O HOH . A HOH 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc27 C CA CA . A CA 151 1_555 G O HOH . A HOH 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? metalc ? metalc28 D CA CA . A CA 152 1_555 G O HOH . A HOH 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.537 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1XA5 _atom_sites.fract_transf_matrix[1][1] 0.026615 _atom_sites.fract_transf_matrix[1][2] 0.015366 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.030732 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002804 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 149 149 CA CA . C 2 CA A 1 151 151 CA CA . D 2 CA A 1 152 152 CA CA . E 2 CA A 1 150 150 CA CA . F 3 KAR A 1 153 1 KAR KAR . G 4 HOH A 1 154 2 HOH HOH . G 4 HOH A 2 155 3 HOH HOH . G 4 HOH A 3 156 4 HOH HOH . G 4 HOH A 4 157 5 HOH HOH . G 4 HOH A 5 158 6 HOH HOH . G 4 HOH A 6 159 8 HOH HOH . G 4 HOH A 7 160 9 HOH HOH . G 4 HOH A 8 161 11 HOH HOH . G 4 HOH A 9 162 13 HOH HOH . G 4 HOH A 10 163 14 HOH HOH . G 4 HOH A 11 164 15 HOH HOH . G 4 HOH A 12 165 16 HOH HOH . G 4 HOH A 13 166 17 HOH HOH . G 4 HOH A 14 167 19 HOH HOH . G 4 HOH A 15 168 22 HOH HOH . G 4 HOH A 16 169 23 HOH HOH . G 4 HOH A 17 170 24 HOH HOH . G 4 HOH A 18 171 26 HOH HOH . G 4 HOH A 19 172 27 HOH HOH . G 4 HOH A 20 173 28 HOH HOH . G 4 HOH A 21 174 29 HOH HOH . G 4 HOH A 22 175 30 HOH HOH . G 4 HOH A 23 176 32 HOH HOH . G 4 HOH A 24 177 33 HOH HOH . G 4 HOH A 25 178 34 HOH HOH . G 4 HOH A 26 179 35 HOH HOH . G 4 HOH A 27 180 36 HOH HOH . G 4 HOH A 28 181 37 HOH HOH . G 4 HOH A 29 182 38 HOH HOH . G 4 HOH A 30 183 39 HOH HOH . G 4 HOH A 31 184 40 HOH HOH . G 4 HOH A 32 185 41 HOH HOH . G 4 HOH A 33 186 42 HOH HOH . G 4 HOH A 34 187 43 HOH HOH . G 4 HOH A 35 188 45 HOH HOH . G 4 HOH A 36 189 46 HOH HOH . G 4 HOH A 37 190 47 HOH HOH . G 4 HOH A 38 191 49 HOH HOH . G 4 HOH A 39 192 50 HOH HOH . G 4 HOH A 40 193 51 HOH HOH . G 4 HOH A 41 194 52 HOH HOH . G 4 HOH A 42 195 55 HOH HOH . G 4 HOH A 43 196 56 HOH HOH . G 4 HOH A 44 197 58 HOH HOH . G 4 HOH A 45 198 59 HOH HOH . G 4 HOH A 46 199 62 HOH HOH . G 4 HOH A 47 200 64 HOH HOH . G 4 HOH A 48 201 67 HOH HOH . G 4 HOH A 49 202 68 HOH HOH . G 4 HOH A 50 203 69 HOH HOH . G 4 HOH A 51 204 70 HOH HOH . G 4 HOH A 52 205 71 HOH HOH . G 4 HOH A 53 206 72 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 8.901 _atom_site.Cartn_y 26.195 _atom_site.Cartn_z 150.618 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 28.77 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 151 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 1 #