data_1XBI # _model_server_result.job_id H2Xnf49GzaAtBVW9sFxwBQ _model_server_result.datetime_utc '2025-03-05 18:46:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1xbi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":150}' # _entry.id 1XBI # _exptl.entry_id 1XBI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1XBI _cell.length_a 43.665 _cell.length_b 48.869 _cell.length_c 51.914 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XBI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 83 n n N1 C6 EPE sing 84 n n N1 C9 EPE sing 85 n n C2 C3 EPE sing 86 n n C2 H21 EPE sing 87 n n C2 H22 EPE sing 88 n n C3 N4 EPE sing 89 n n C3 H31 EPE sing 90 n n C3 H32 EPE sing 91 n n N4 C5 EPE sing 92 n n N4 C7 EPE sing 93 n n C5 C6 EPE sing 94 n n C5 H51 EPE sing 95 n n C5 H52 EPE sing 96 n n C6 H61 EPE sing 97 n n C6 H62 EPE sing 98 n n C7 C8 EPE sing 99 n n C7 H71 EPE sing 100 n n C7 H72 EPE sing 101 n n C8 O8 EPE sing 102 n n C8 H81 EPE sing 103 n n C8 H82 EPE sing 104 n n O8 HO8 EPE sing 105 n n C9 C10 EPE sing 106 n n C9 H91 EPE sing 107 n n C9 H92 EPE sing 108 n n C10 S EPE sing 109 n n C10 H101 EPE sing 110 n n C10 H102 EPE sing 111 n n S O1S EPE doub 112 n n S O2S EPE doub 113 n n S O3S EPE sing 114 n n O3S HOS3 EPE sing 115 n n # _atom_sites.entry_id 1XBI _atom_sites.fract_transf_matrix[1][1] 0.022902 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020463 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019263 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EPE A 1 150 150 EPE EPE . C 3 HOH A 1 200 200 HOH HOH . C 3 HOH A 2 201 201 HOH HOH . C 3 HOH A 3 202 202 HOH HOH . C 3 HOH A 4 203 203 HOH HOH . C 3 HOH A 5 204 204 HOH HOH . C 3 HOH A 6 205 205 HOH HOH . C 3 HOH A 7 206 206 HOH HOH . C 3 HOH A 8 207 207 HOH HOH . C 3 HOH A 9 208 208 HOH HOH . C 3 HOH A 10 209 209 HOH HOH . C 3 HOH A 11 210 210 HOH HOH . C 3 HOH A 12 211 211 HOH HOH . C 3 HOH A 13 212 212 HOH HOH . C 3 HOH A 14 213 213 HOH HOH . C 3 HOH A 15 214 214 HOH HOH . C 3 HOH A 16 215 215 HOH HOH . C 3 HOH A 17 216 216 HOH HOH . C 3 HOH A 18 217 217 HOH HOH . C 3 HOH A 19 218 218 HOH HOH . C 3 HOH A 20 219 219 HOH HOH . C 3 HOH A 21 220 220 HOH HOH . C 3 HOH A 22 222 222 HOH HOH . C 3 HOH A 23 223 223 HOH HOH . C 3 HOH A 24 224 224 HOH HOH . C 3 HOH A 25 225 225 HOH HOH . C 3 HOH A 26 226 226 HOH HOH . C 3 HOH A 27 227 227 HOH HOH . C 3 HOH A 28 228 228 HOH HOH . C 3 HOH A 29 229 229 HOH HOH . C 3 HOH A 30 230 230 HOH HOH . C 3 HOH A 31 231 231 HOH HOH . C 3 HOH A 32 232 232 HOH HOH . C 3 HOH A 33 233 233 HOH HOH . C 3 HOH A 34 234 234 HOH HOH . C 3 HOH A 35 235 235 HOH HOH . C 3 HOH A 36 236 236 HOH HOH . C 3 HOH A 37 237 237 HOH HOH . C 3 HOH A 38 238 238 HOH HOH . C 3 HOH A 39 239 239 HOH HOH . C 3 HOH A 40 240 240 HOH HOH . C 3 HOH A 41 241 241 HOH HOH . C 3 HOH A 42 242 242 HOH HOH . C 3 HOH A 43 243 243 HOH HOH . C 3 HOH A 44 244 244 HOH HOH . C 3 HOH A 45 245 245 HOH HOH . C 3 HOH A 46 246 246 HOH HOH . C 3 HOH A 47 247 247 HOH HOH . C 3 HOH A 48 248 248 HOH HOH . C 3 HOH A 49 249 249 HOH HOH . C 3 HOH A 50 250 250 HOH HOH . C 3 HOH A 51 251 251 HOH HOH . C 3 HOH A 52 252 252 HOH HOH . C 3 HOH A 53 253 253 HOH HOH . C 3 HOH A 54 254 254 HOH HOH . C 3 HOH A 55 255 255 HOH HOH . C 3 HOH A 56 256 256 HOH HOH . C 3 HOH A 57 257 257 HOH HOH . C 3 HOH A 58 258 258 HOH HOH . C 3 HOH A 59 259 259 HOH HOH . C 3 HOH A 60 260 260 HOH HOH . C 3 HOH A 61 261 261 HOH HOH . C 3 HOH A 62 263 263 HOH HOH . C 3 HOH A 63 264 264 HOH HOH . C 3 HOH A 64 265 265 HOH HOH . C 3 HOH A 65 266 266 HOH HOH . C 3 HOH A 66 267 267 HOH HOH . C 3 HOH A 67 268 268 HOH HOH . C 3 HOH A 68 269 269 HOH HOH . C 3 HOH A 69 270 270 HOH HOH . C 3 HOH A 70 272 272 HOH HOH . C 3 HOH A 71 273 273 HOH HOH . C 3 HOH A 72 274 274 HOH HOH . C 3 HOH A 73 275 275 HOH HOH . C 3 HOH A 74 276 276 HOH HOH . C 3 HOH A 75 277 277 HOH HOH . C 3 HOH A 76 278 278 HOH HOH . C 3 HOH A 77 279 279 HOH HOH . C 3 HOH A 78 280 280 HOH HOH . C 3 HOH A 79 281 281 HOH HOH . C 3 HOH A 80 282 282 HOH HOH . C 3 HOH A 81 283 283 HOH HOH . C 3 HOH A 82 284 284 HOH HOH . C 3 HOH A 83 285 285 HOH HOH . C 3 HOH A 84 286 286 HOH HOH . C 3 HOH A 85 287 287 HOH HOH . C 3 HOH A 86 288 288 HOH HOH . C 3 HOH A 87 289 289 HOH HOH . C 3 HOH A 88 290 290 HOH HOH . C 3 HOH A 89 291 291 HOH HOH . C 3 HOH A 90 292 292 HOH HOH . C 3 HOH A 91 293 293 HOH HOH . C 3 HOH A 92 294 294 HOH HOH . C 3 HOH A 93 295 295 HOH HOH . C 3 HOH A 94 297 297 HOH HOH . C 3 HOH A 95 298 298 HOH HOH . C 3 HOH A 96 299 299 HOH HOH . C 3 HOH A 97 301 301 HOH HOH . C 3 HOH A 98 302 302 HOH HOH . C 3 HOH A 99 303 303 HOH HOH . C 3 HOH A 100 304 304 HOH HOH . C 3 HOH A 101 305 305 HOH HOH . C 3 HOH A 102 306 306 HOH HOH . C 3 HOH A 103 307 307 HOH HOH . C 3 HOH A 104 308 308 HOH HOH . C 3 HOH A 105 309 309 HOH HOH . C 3 HOH A 106 310 310 HOH HOH . C 3 HOH A 107 311 311 HOH HOH . C 3 HOH A 108 312 312 HOH HOH . C 3 HOH A 109 314 314 HOH HOH . C 3 HOH A 110 315 315 HOH HOH . C 3 HOH A 111 316 316 HOH HOH . C 3 HOH A 112 317 317 HOH HOH . C 3 HOH A 113 318 318 HOH HOH . C 3 HOH A 114 319 319 HOH HOH . C 3 HOH A 115 321 321 HOH HOH . C 3 HOH A 116 322 322 HOH HOH . C 3 HOH A 117 323 323 HOH HOH . C 3 HOH A 118 324 324 HOH HOH . C 3 HOH A 119 325 325 HOH HOH . C 3 HOH A 120 326 326 HOH HOH . C 3 HOH A 121 327 327 HOH HOH . C 3 HOH A 122 328 328 HOH HOH . C 3 HOH A 123 329 329 HOH HOH . C 3 HOH A 124 330 330 HOH HOH . C 3 HOH A 125 331 331 HOH HOH . C 3 HOH A 126 332 332 HOH HOH . C 3 HOH A 127 333 333 HOH HOH . C 3 HOH A 128 334 334 HOH HOH . C 3 HOH A 129 335 335 HOH HOH . C 3 HOH A 130 336 336 HOH HOH . C 3 HOH A 131 337 337 HOH HOH . C 3 HOH A 132 338 338 HOH HOH . C 3 HOH A 133 339 339 HOH HOH . C 3 HOH A 134 340 340 HOH HOH . C 3 HOH A 135 341 341 HOH HOH . C 3 HOH A 136 342 342 HOH HOH . C 3 HOH A 137 343 343 HOH HOH . C 3 HOH A 138 344 344 HOH HOH . C 3 HOH A 139 345 345 HOH HOH . C 3 HOH A 140 347 347 HOH HOH . C 3 HOH A 141 348 348 HOH HOH . C 3 HOH A 142 349 349 HOH HOH . C 3 HOH A 143 350 350 HOH HOH . C 3 HOH A 144 351 351 HOH HOH . C 3 HOH A 145 352 352 HOH HOH . C 3 HOH A 146 353 353 HOH HOH . C 3 HOH A 147 354 354 HOH HOH . C 3 HOH A 148 355 355 HOH HOH . C 3 HOH A 149 356 356 HOH HOH . C 3 HOH A 150 358 358 HOH HOH . C 3 HOH A 151 359 359 HOH HOH . C 3 HOH A 152 360 360 HOH HOH . C 3 HOH A 153 361 361 HOH HOH . C 3 HOH A 154 362 362 HOH HOH . C 3 HOH A 155 363 363 HOH HOH . C 3 HOH A 156 364 364 HOH HOH . C 3 HOH A 157 365 365 HOH HOH . C 3 HOH A 158 366 366 HOH HOH . C 3 HOH A 159 367 367 HOH HOH . C 3 HOH A 160 368 368 HOH HOH . C 3 HOH A 161 369 369 HOH HOH . C 3 HOH A 162 370 370 HOH HOH . C 3 HOH A 163 371 371 HOH HOH . C 3 HOH A 164 372 372 HOH HOH . C 3 HOH A 165 373 373 HOH HOH . C 3 HOH A 166 374 374 HOH HOH . C 3 HOH A 167 375 375 HOH HOH . C 3 HOH A 168 376 376 HOH HOH . C 3 HOH A 169 377 377 HOH HOH . C 3 HOH A 170 378 378 HOH HOH . C 3 HOH A 171 379 379 HOH HOH . C 3 HOH A 172 380 380 HOH HOH . C 3 HOH A 173 381 381 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . B 2 12.571 42.95 32.257 1 23.7 ? N1 EPE 150 A 1 HETATM 2 C C2 EPE . . . B 2 13.416 43.308 31.088 1 18.55 ? C2 EPE 150 A 1 HETATM 3 C C3 EPE . . . B 2 14.254 41.9 30.969 1 19.19 ? C3 EPE 150 A 1 HETATM 4 N N4 EPE . . . B 2 15.157 41.848 32.218 1 21.94 ? N4 EPE 150 A 1 HETATM 5 C C5 EPE . . . B 2 14.533 41.879 33.531 1 23.55 ? C5 EPE 150 A 1 HETATM 6 C C6 EPE . . . B 2 13.443 42.964 33.506 1 24.79 ? C6 EPE 150 A 1 HETATM 7 C C7 EPE . . . B 2 16.109 40.757 31.794 1 25.33 ? C7 EPE 150 A 1 HETATM 8 C C8 EPE . . . B 2 17.071 40.464 32.984 1 20.45 ? C8 EPE 150 A 1 HETATM 9 O O8 EPE . . . B 2 17.929 41.45 33.308 1 21.18 ? O8 EPE 150 A 1 HETATM 10 C C9 EPE . . . B 2 11.624 44.232 32.259 1 27.88 ? C9 EPE 150 A 1 HETATM 11 C C10 EPE . . . B 2 10.297 43.785 32.644 1 23.77 ? C10 EPE 150 A 1 HETATM 12 S S EPE . . . B 2 9.248 45.168 33.089 1 23.01 ? S EPE 150 A 1 HETATM 13 O O1S EPE . . . B 2 8.822 45.491 31.706 1 24.41 ? O1S EPE 150 A 1 HETATM 14 O O2S EPE . . . B 2 9.949 46.323 33.806 1 23.94 ? O2S EPE 150 A 1 HETATM 15 O O3S EPE . . . B 2 8.266 44.397 34.046 1 27.31 ? O3S EPE 150 A 1 # _model_server_stats.io_time_ms 39 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 15 #