data_1XC3 # _model_server_result.job_id Mx65NHYd8GPqi6VTFjKEfg _model_server_result.datetime_utc '2024-11-15 22:52:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1xc3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 1XC3 # _exptl.entry_id 1XC3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PLATINUM (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1XC3 _cell.length_a 112.66 _cell.length_b 112.66 _cell.length_c 75.087 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XC3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA,PQS dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G 1 1 A,B,C,D,E,F,G 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SD MET 36 A MET 33 1_555 B PT PT . A PT 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.88 ? metalc ? metalc2 A SD MET 97 A MET 94 1_555 D PT PT . A PT 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc3 A ND1 HIS 156 A HIS 153 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc4 A SG CYS 171 A CYS 168 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc5 A ND1 HIS 174 A HIS 171 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? metalc ? metalc6 A SG CYS 177 A CYS 174 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc7 D PT PT . A PT 303 1_555 G O HOH . A HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.578 ? # _chem_comp.formula 'Pt 2' _chem_comp.formula_weight 195.078 _chem_comp.id PT _chem_comp.mon_nstd_flag . _chem_comp.name 'PLATINUM (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1XC3 _atom_sites.fract_transf_matrix[1][1] 0.008876 _atom_sites.fract_transf_matrix[1][2] 0.005125 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010249 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013318 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PT A 1 301 1 PT PT . C 3 ZN A 1 302 2 ZN ZN . D 2 PT A 1 303 3 PT PT . E 4 GOL A 1 305 5 GOL GOL . F 4 GOL A 1 306 6 GOL GOL . G 5 HOH A 1 307 1 HOH HOH . G 5 HOH A 2 308 2 HOH HOH . G 5 HOH A 3 309 3 HOH HOH . G 5 HOH A 4 310 4 HOH HOH . G 5 HOH A 5 311 5 HOH HOH . G 5 HOH A 6 312 6 HOH HOH . G 5 HOH A 7 313 7 HOH HOH . G 5 HOH A 8 314 8 HOH HOH . G 5 HOH A 9 315 9 HOH HOH . G 5 HOH A 10 316 10 HOH HOH . G 5 HOH A 11 317 11 HOH HOH . G 5 HOH A 12 318 12 HOH HOH . G 5 HOH A 13 319 13 HOH HOH . G 5 HOH A 14 320 14 HOH HOH . G 5 HOH A 15 321 15 HOH HOH . G 5 HOH A 16 322 16 HOH HOH . G 5 HOH A 17 323 17 HOH HOH . G 5 HOH A 18 324 18 HOH HOH . G 5 HOH A 19 325 19 HOH HOH . G 5 HOH A 20 326 20 HOH HOH . G 5 HOH A 21 327 21 HOH HOH . G 5 HOH A 22 328 22 HOH HOH . G 5 HOH A 23 329 23 HOH HOH . G 5 HOH A 24 330 24 HOH HOH . G 5 HOH A 25 331 25 HOH HOH . G 5 HOH A 26 332 26 HOH HOH . G 5 HOH A 27 333 27 HOH HOH . G 5 HOH A 28 334 28 HOH HOH . G 5 HOH A 29 335 29 HOH HOH . G 5 HOH A 30 336 30 HOH HOH . G 5 HOH A 31 337 31 HOH HOH . G 5 HOH A 32 338 32 HOH HOH . G 5 HOH A 33 339 33 HOH HOH . G 5 HOH A 34 340 34 HOH HOH . G 5 HOH A 35 341 35 HOH HOH . G 5 HOH A 36 342 36 HOH HOH . G 5 HOH A 37 343 37 HOH HOH . G 5 HOH A 38 344 38 HOH HOH . G 5 HOH A 39 345 39 HOH HOH . G 5 HOH A 40 346 40 HOH HOH . G 5 HOH A 41 347 41 HOH HOH . G 5 HOH A 42 348 42 HOH HOH . G 5 HOH A 43 349 43 HOH HOH . G 5 HOH A 44 350 44 HOH HOH . G 5 HOH A 45 351 45 HOH HOH . G 5 HOH A 46 352 46 HOH HOH . G 5 HOH A 47 353 47 HOH HOH . G 5 HOH A 48 354 48 HOH HOH . G 5 HOH A 49 355 49 HOH HOH . G 5 HOH A 50 356 50 HOH HOH . G 5 HOH A 51 357 51 HOH HOH . G 5 HOH A 52 358 52 HOH HOH . G 5 HOH A 53 359 53 HOH HOH . G 5 HOH A 54 360 54 HOH HOH . G 5 HOH A 55 361 55 HOH HOH . G 5 HOH A 56 362 56 HOH HOH . G 5 HOH A 57 363 57 HOH HOH . G 5 HOH A 58 364 58 HOH HOH . G 5 HOH A 59 365 59 HOH HOH . G 5 HOH A 60 366 60 HOH HOH . G 5 HOH A 61 367 61 HOH HOH . G 5 HOH A 62 368 62 HOH HOH . G 5 HOH A 63 369 63 HOH HOH . G 5 HOH A 64 370 64 HOH HOH . G 5 HOH A 65 371 65 HOH HOH . G 5 HOH A 66 372 66 HOH HOH . G 5 HOH A 67 373 67 HOH HOH . G 5 HOH A 68 374 68 HOH HOH . G 5 HOH A 69 375 69 HOH HOH . G 5 HOH A 70 376 70 HOH HOH . G 5 HOH A 71 377 71 HOH HOH . G 5 HOH A 72 378 72 HOH HOH . G 5 HOH A 73 379 73 HOH HOH . G 5 HOH A 74 380 74 HOH HOH . G 5 HOH A 75 381 75 HOH HOH . G 5 HOH A 76 382 76 HOH HOH . G 5 HOH A 77 383 77 HOH HOH . G 5 HOH A 78 384 78 HOH HOH . G 5 HOH A 79 385 79 HOH HOH . G 5 HOH A 80 386 80 HOH HOH . G 5 HOH A 81 387 81 HOH HOH . G 5 HOH A 82 388 82 HOH HOH . G 5 HOH A 83 389 83 HOH HOH . G 5 HOH A 84 390 84 HOH HOH . G 5 HOH A 85 391 85 HOH HOH . G 5 HOH A 86 392 86 HOH HOH . G 5 HOH A 87 393 87 HOH HOH . G 5 HOH A 88 394 88 HOH HOH . G 5 HOH A 89 395 89 HOH HOH . G 5 HOH A 90 396 90 HOH HOH . G 5 HOH A 91 397 91 HOH HOH . G 5 HOH A 92 398 92 HOH HOH . G 5 HOH A 93 399 93 HOH HOH . G 5 HOH A 94 400 94 HOH HOH . G 5 HOH A 95 401 95 HOH HOH . G 5 HOH A 96 402 96 HOH HOH . G 5 HOH A 97 403 97 HOH HOH . G 5 HOH A 98 404 98 HOH HOH . G 5 HOH A 99 405 99 HOH HOH . G 5 HOH A 100 406 100 HOH HOH . G 5 HOH A 101 407 101 HOH HOH . G 5 HOH A 102 408 102 HOH HOH . G 5 HOH A 103 409 103 HOH HOH . G 5 HOH A 104 410 104 HOH HOH . G 5 HOH A 105 411 105 HOH HOH . G 5 HOH A 106 412 106 HOH HOH . G 5 HOH A 107 413 107 HOH HOH . G 5 HOH A 108 414 108 HOH HOH . G 5 HOH A 109 415 109 HOH HOH . G 5 HOH A 110 416 110 HOH HOH . G 5 HOH A 111 417 111 HOH HOH . G 5 HOH A 112 418 112 HOH HOH . G 5 HOH A 113 419 113 HOH HOH . G 5 HOH A 114 420 114 HOH HOH . G 5 HOH A 115 421 115 HOH HOH . G 5 HOH A 116 422 116 HOH HOH . G 5 HOH A 117 423 117 HOH HOH . G 5 HOH A 118 424 118 HOH HOH . G 5 HOH A 119 425 119 HOH HOH . G 5 HOH A 120 426 120 HOH HOH . G 5 HOH A 121 427 121 HOH HOH . G 5 HOH A 122 428 122 HOH HOH . G 5 HOH A 123 429 123 HOH HOH . G 5 HOH A 124 430 124 HOH HOH . G 5 HOH A 125 431 125 HOH HOH . G 5 HOH A 126 432 126 HOH HOH . G 5 HOH A 127 433 127 HOH HOH . G 5 HOH A 128 434 128 HOH HOH . G 5 HOH A 129 435 129 HOH HOH . G 5 HOH A 130 436 130 HOH HOH . G 5 HOH A 131 437 131 HOH HOH . G 5 HOH A 132 438 132 HOH HOH . G 5 HOH A 133 439 133 HOH HOH . G 5 HOH A 134 440 134 HOH HOH . G 5 HOH A 135 441 135 HOH HOH . G 5 HOH A 136 442 136 HOH HOH . G 5 HOH A 137 443 137 HOH HOH . G 5 HOH A 138 444 138 HOH HOH . G 5 HOH A 139 445 139 HOH HOH . G 5 HOH A 140 446 140 HOH HOH . G 5 HOH A 141 447 141 HOH HOH . G 5 HOH A 142 448 142 HOH HOH . G 5 HOH A 143 449 143 HOH HOH . G 5 HOH A 144 450 144 HOH HOH . G 5 HOH A 145 451 145 HOH HOH . G 5 HOH A 146 452 146 HOH HOH . G 5 HOH A 147 453 147 HOH HOH . G 5 HOH A 148 454 148 HOH HOH . G 5 HOH A 149 455 149 HOH HOH . G 5 HOH A 150 456 150 HOH HOH . G 5 HOH A 151 457 151 HOH HOH . G 5 HOH A 152 458 152 HOH HOH . G 5 HOH A 153 459 153 HOH HOH . G 5 HOH A 154 460 154 HOH HOH . G 5 HOH A 155 461 155 HOH HOH . G 5 HOH A 156 462 156 HOH HOH . G 5 HOH A 157 463 157 HOH HOH . G 5 HOH A 158 464 158 HOH HOH . G 5 HOH A 159 465 159 HOH HOH . G 5 HOH A 160 466 160 HOH HOH . G 5 HOH A 161 467 161 HOH HOH . G 5 HOH A 162 468 162 HOH HOH . G 5 HOH A 163 469 163 HOH HOH . G 5 HOH A 164 470 164 HOH HOH . G 5 HOH A 165 471 165 HOH HOH . G 5 HOH A 166 472 166 HOH HOH . G 5 HOH A 167 473 167 HOH HOH . G 5 HOH A 168 474 168 HOH HOH . G 5 HOH A 169 475 169 HOH HOH . G 5 HOH A 170 476 170 HOH HOH . G 5 HOH A 171 477 171 HOH HOH . G 5 HOH A 172 478 172 HOH HOH . G 5 HOH A 173 479 173 HOH HOH . G 5 HOH A 174 480 174 HOH HOH . G 5 HOH A 175 481 175 HOH HOH . G 5 HOH A 176 482 176 HOH HOH . G 5 HOH A 177 483 177 HOH HOH . G 5 HOH A 178 484 178 HOH HOH . G 5 HOH A 179 485 179 HOH HOH . G 5 HOH A 180 486 180 HOH HOH . G 5 HOH A 181 487 181 HOH HOH . G 5 HOH A 182 488 182 HOH HOH . G 5 HOH A 183 489 183 HOH HOH . G 5 HOH A 184 490 184 HOH HOH . G 5 HOH A 185 491 185 HOH HOH . G 5 HOH A 186 492 186 HOH HOH . G 5 HOH A 187 493 187 HOH HOH . G 5 HOH A 188 494 188 HOH HOH . G 5 HOH A 189 495 189 HOH HOH . G 5 HOH A 190 496 190 HOH HOH . G 5 HOH A 191 497 191 HOH HOH . G 5 HOH A 192 498 192 HOH HOH . G 5 HOH A 193 499 193 HOH HOH . G 5 HOH A 194 500 194 HOH HOH . G 5 HOH A 195 501 195 HOH HOH . G 5 HOH A 196 502 196 HOH HOH . G 5 HOH A 197 503 197 HOH HOH . G 5 HOH A 198 504 198 HOH HOH . G 5 HOH A 199 505 199 HOH HOH . G 5 HOH A 200 506 200 HOH HOH . G 5 HOH A 201 507 201 HOH HOH . G 5 HOH A 202 508 202 HOH HOH . G 5 HOH A 203 509 203 HOH HOH . G 5 HOH A 204 510 204 HOH HOH . G 5 HOH A 205 511 205 HOH HOH . G 5 HOH A 206 512 206 HOH HOH . G 5 HOH A 207 513 207 HOH HOH . G 5 HOH A 208 514 208 HOH HOH . G 5 HOH A 209 515 209 HOH HOH . G 5 HOH A 210 516 210 HOH HOH . G 5 HOH A 211 517 211 HOH HOH . G 5 HOH A 212 518 212 HOH HOH . G 5 HOH A 213 519 213 HOH HOH . G 5 HOH A 214 520 214 HOH HOH . G 5 HOH A 215 521 215 HOH HOH . G 5 HOH A 216 522 216 HOH HOH . G 5 HOH A 217 523 217 HOH HOH . G 5 HOH A 218 524 218 HOH HOH . G 5 HOH A 219 525 219 HOH HOH . G 5 HOH A 220 526 220 HOH HOH . G 5 HOH A 221 527 221 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol PT _atom_site.label_atom_id PT _atom_site.label_comp_id PT _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -1.95 _atom_site.Cartn_y 67.149 _atom_site.Cartn_z 11.611 _atom_site.occupancy 0.76 _atom_site.B_iso_or_equiv 52.33 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id PT _atom_site.auth_comp_id PT _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 1 #