data_1XCH
#
_model_server_result.job_id            X8yRvgw85ocBkgv37YWBBA 
_model_server_result.datetime_utc      '2024-10-14 06:17:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1xch 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":154}' 
#
_entry.id    1XCH 
#
_exptl.entry_id    1XCH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          107.17 
_cell.angle_gamma         90 
_cell.entry_id            1XCH 
_cell.length_a            64.566 
_cell.length_b            28.872 
_cell.length_c            35.882 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1XCH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 93 A HIS 93 1_555 C FE HEM . A HEM 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? 
metalc ? metalc2 C FE HEM . A HEM 154 1_555 D O HOH . A HOH 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 116 n n 
CHA C4D HEM doub 117 n n 
CHA HHA HEM sing 118 n n 
CHB C4A HEM sing 119 n n 
CHB C1B HEM doub 120 n n 
CHB HHB HEM sing 121 n n 
CHC C4B HEM sing 122 n n 
CHC C1C HEM doub 123 n n 
CHC HHC HEM sing 124 n n 
CHD C4C HEM doub 125 n n 
CHD C1D HEM sing 126 n n 
CHD HHD HEM sing 127 n n 
C1A C2A HEM doub 128 n y 
C1A NA HEM sing 129 n y 
C2A C3A HEM sing 130 n y 
C2A CAA HEM sing 131 n n 
C3A C4A HEM doub 132 n y 
C3A CMA HEM sing 133 n n 
C4A NA HEM sing 134 n y 
CMA HMA HEM sing 135 n n 
CMA HMAA HEM sing 136 n n 
CMA HMAB HEM sing 137 n n 
CAA CBA HEM sing 138 n n 
CAA HAA HEM sing 139 n n 
CAA HAAA HEM sing 140 n n 
CBA CGA HEM sing 141 n n 
CBA HBA HEM sing 142 n n 
CBA HBAA HEM sing 143 n n 
CGA O1A HEM doub 144 n n 
CGA O2A HEM sing 145 n n 
C1B C2B HEM sing 146 n n 
C1B NB HEM sing 147 n n 
C2B C3B HEM doub 148 n n 
C2B CMB HEM sing 149 n n 
C3B C4B HEM sing 150 n n 
C3B CAB HEM sing 151 n n 
C4B NB HEM doub 152 n n 
CMB HMB HEM sing 153 n n 
CMB HMBA HEM sing 154 n n 
CMB HMBB HEM sing 155 n n 
CAB CBB HEM doub 156 n n 
CAB HAB HEM sing 157 n n 
CBB HBB HEM sing 158 n n 
CBB HBBA HEM sing 159 n n 
C1C C2C HEM sing 160 n y 
C1C NC HEM sing 161 n y 
C2C C3C HEM doub 162 n y 
C2C CMC HEM sing 163 n n 
C3C C4C HEM sing 164 n y 
C3C CAC HEM sing 165 n n 
C4C NC HEM sing 166 n y 
CMC HMC HEM sing 167 n n 
CMC HMCA HEM sing 168 n n 
CMC HMCB HEM sing 169 n n 
CAC CBC HEM doub 170 n n 
CAC HAC HEM sing 171 n n 
CBC HBC HEM sing 172 n n 
CBC HBCA HEM sing 173 n n 
C1D C2D HEM sing 174 n n 
C1D ND HEM doub 175 n n 
C2D C3D HEM doub 176 n n 
C2D CMD HEM sing 177 n n 
C3D C4D HEM sing 178 n n 
C3D CAD HEM sing 179 n n 
C4D ND HEM sing 180 n n 
CMD HMD HEM sing 181 n n 
CMD HMDA HEM sing 182 n n 
CMD HMDB HEM sing 183 n n 
CAD CBD HEM sing 184 n n 
CAD HAD HEM sing 185 n n 
CAD HADA HEM sing 186 n n 
CBD CGD HEM sing 187 n n 
CBD HBD HEM sing 188 n n 
CBD HBDA HEM sing 189 n n 
CGD O1D HEM doub 190 n n 
CGD O2D HEM sing 191 n n 
O2A H2A HEM sing 192 n n 
O2D H2D HEM sing 193 n n 
FE NA HEM sing 194 n n 
FE NB HEM sing 195 n n 
FE NC HEM sing 196 n n 
FE ND HEM sing 197 n n 
#
_atom_sites.entry_id                     1XCH 
_atom_sites.fract_transf_matrix[1][1]    0.015488 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004785 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.034636 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.029169 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 155 155 SO4 SO4 . 
C 3 HEM A 1 154 154 HEM HEM . 
D 4 HOH A 1 156 156 HOH HOH . 
D 4 HOH A 2 157 157 HOH HOH . 
D 4 HOH A 3 158 158 HOH HOH . 
D 4 HOH A 4 159 159 HOH HOH . 
D 4 HOH A 5 160 160 HOH HOH . 
D 4 HOH A 6 161 161 HOH HOH . 
D 4 HOH A 7 162 162 HOH HOH . 
D 4 HOH A 8 163 163 HOH HOH . 
D 4 HOH A 9 164 164 HOH HOH . 
D 4 HOH A 10 165 165 HOH HOH . 
D 4 HOH A 11 166 166 HOH HOH . 
D 4 HOH A 12 167 167 HOH HOH . 
D 4 HOH A 13 171 171 HOH HOH . 
D 4 HOH A 14 172 172 HOH HOH . 
D 4 HOH A 15 173 173 HOH HOH . 
D 4 HOH A 16 174 174 HOH HOH . 
D 4 HOH A 17 175 175 HOH HOH . 
D 4 HOH A 18 176 176 HOH HOH . 
D 4 HOH A 19 178 178 HOH HOH . 
D 4 HOH A 20 179 179 HOH HOH . 
D 4 HOH A 21 180 180 HOH HOH . 
D 4 HOH A 22 181 181 HOH HOH . 
D 4 HOH A 23 183 183 HOH HOH . 
D 4 HOH A 24 184 184 HOH HOH . 
D 4 HOH A 25 185 185 HOH HOH . 
D 4 HOH A 26 187 187 HOH HOH . 
D 4 HOH A 27 188 188 HOH HOH . 
D 4 HOH A 28 189 189 HOH HOH . 
D 4 HOH A 29 192 192 HOH HOH . 
D 4 HOH A 30 193 193 HOH HOH . 
D 4 HOH A 31 195 195 HOH HOH . 
D 4 HOH A 32 197 197 HOH HOH . 
D 4 HOH A 33 201 201 HOH HOH . 
D 4 HOH A 34 202 202 HOH HOH . 
D 4 HOH A 35 203 203 HOH HOH . 
D 4 HOH A 36 205 205 HOH HOH . 
D 4 HOH A 37 208 208 HOH HOH . 
D 4 HOH A 38 209 209 HOH HOH . 
D 4 HOH A 39 213 213 HOH HOH . 
D 4 HOH A 40 214 214 HOH HOH . 
D 4 HOH A 41 215 215 HOH HOH . 
D 4 HOH A 42 217 217 HOH HOH . 
D 4 HOH A 43 218 218 HOH HOH . 
D 4 HOH A 44 219 219 HOH HOH . 
D 4 HOH A 45 220 220 HOH HOH . 
D 4 HOH A 46 221 221 HOH HOH . 
D 4 HOH A 47 223 223 HOH HOH . 
D 4 HOH A 48 224 224 HOH HOH . 
D 4 HOH A 49 225 225 HOH HOH . 
D 4 HOH A 50 227 227 HOH HOH . 
D 4 HOH A 51 228 228 HOH HOH . 
D 4 HOH A 52 231 231 HOH HOH . 
D 4 HOH A 53 233 233 HOH HOH . 
D 4 HOH A 54 234 234 HOH HOH . 
D 4 HOH A 55 235 235 HOH HOH . 
D 4 HOH A 56 236 236 HOH HOH . 
D 4 HOH A 57 238 238 HOH HOH . 
D 4 HOH A 58 241 241 HOH HOH . 
D 4 HOH A 59 242 242 HOH HOH . 
D 4 HOH A 60 243 243 HOH HOH . 
D 4 HOH A 61 244 244 HOH HOH . 
D 4 HOH A 62 245 245 HOH HOH . 
D 4 HOH A 63 246 246 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . C 3 15.752 32.529 5.185 1 9.63 ? CHA HEM 154 A 1 
HETATM 2 C CHB HEM . . . C 3 13.859 29.426 8.322 1 9.1 ? CHB HEM 154 A 1 
HETATM 3 C CHC HEM . . . C 3 13.08 26.305 4.809 1 10.91 ? CHC HEM 154 A 1 
HETATM 4 C CHD HEM . . . C 3 15.327 29.224 1.724 1 8.87 ? CHD HEM 154 A 1 
HETATM 5 C C1A HEM . . . C 3 15.244 32.02 6.35 1 8.64 ? C1A HEM 154 A 1 
HETATM 6 C C2A HEM . . . C 3 15.155 32.66 7.641 1 7.24 ? C2A HEM 154 A 1 
HETATM 7 C C3A HEM . . . C 3 14.624 31.811 8.499 1 7.84 ? C3A HEM 154 A 1 
HETATM 8 C C4A HEM . . . C 3 14.408 30.556 7.792 1 8.78 ? C4A HEM 154 A 1 
HETATM 9 C CMA HEM . . . C 3 14.273 32.018 9.977 1 8.72 ? CMA HEM 154 A 1 
HETATM 10 C CAA HEM . . . C 3 15.529 34.155 7.872 1 10.4 ? CAA HEM 154 A 1 
HETATM 11 C CBA HEM . . . C 3 14.313 35.109 8.024 1 10.24 ? CBA HEM 154 A 1 
HETATM 12 C CGA HEM . . . C 3 13.407 35.101 6.775 1 13.03 ? CGA HEM 154 A 1 
HETATM 13 O O1A HEM . . . C 3 13.973 35.374 5.691 1 12.31 ? O1A HEM 154 A 1 
HETATM 14 O O2A HEM . . . C 3 12.204 34.784 7.008 1 14.26 ? O2A HEM 154 A 1 
HETATM 15 C C1B HEM . . . C 3 13.454 28.28 7.688 1 9.8 ? C1B HEM 154 A 1 
HETATM 16 C C2B HEM . . . C 3 12.822 27.141 8.285 1 9.48 ? C2B HEM 154 A 1 
HETATM 17 C C3B HEM . . . C 3 12.575 26.296 7.294 1 11.73 ? C3B HEM 154 A 1 
HETATM 18 C C4B HEM . . . C 3 13.151 26.859 6.086 1 10.28 ? C4B HEM 154 A 1 
HETATM 19 C CMB HEM . . . C 3 12.391 27.04 9.786 1 10.33 ? CMB HEM 154 A 1 
HETATM 20 C CAB HEM . . . C 3 11.935 24.907 7.306 1 11.35 ? CAB HEM 154 A 1 
HETATM 21 C CBB HEM . . . C 3 12.375 23.849 7.955 1 14.88 ? CBB HEM 154 A 1 
HETATM 22 C C1C HEM . . . C 3 13.724 26.737 3.659 1 7.78 ? C1C HEM 154 A 1 
HETATM 23 C C2C HEM . . . C 3 13.878 26.026 2.416 1 10.28 ? C2C HEM 154 A 1 
HETATM 24 C C3C HEM . . . C 3 14.556 26.819 1.579 1 9.7 ? C3C HEM 154 A 1 
HETATM 25 C C4C HEM . . . C 3 14.764 28.096 2.273 1 8.71 ? C4C HEM 154 A 1 
HETATM 26 C CMC HEM . . . C 3 13.445 24.56 2.23 1 10.59 ? CMC HEM 154 A 1 
HETATM 27 C CAC HEM . . . C 3 15.105 26.685 0.137 1 9.84 ? CAC HEM 154 A 1 
HETATM 28 C CBC HEM . . . C 3 15.182 25.5 -0.45 1 11.53 ? CBC HEM 154 A 1 
HETATM 29 C C1D HEM . . . C 3 15.635 30.421 2.353 1 10.82 ? C1D HEM 154 A 1 
HETATM 30 C C2D HEM . . . C 3 16.3 31.55 1.782 1 11.75 ? C2D HEM 154 A 1 
HETATM 31 C C3D HEM . . . C 3 16.414 32.465 2.758 1 12.51 ? C3D HEM 154 A 1 
HETATM 32 C C4D HEM . . . C 3 15.804 31.912 3.936 1 9.74 ? C4D HEM 154 A 1 
HETATM 33 C CMD HEM . . . C 3 16.776 31.711 0.324 1 11.82 ? CMD HEM 154 A 1 
HETATM 34 C CAD HEM . . . C 3 17.149 33.831 2.724 1 15.81 ? CAD HEM 154 A 1 
HETATM 35 C CBD HEM . . . C 3 18.648 33.553 3.055 1 20.66 ? CBD HEM 154 A 1 
HETATM 36 C CGD HEM . . . C 3 19.56 34.744 3.095 1 23.94 ? CGD HEM 154 A 1 
HETATM 37 O O1D HEM . . . C 3 20.041 35.16 2.014 1 25.89 ? O1D HEM 154 A 1 
HETATM 38 O O2D HEM . . . C 3 19.877 35.215 4.202 1 27.24 ? O2D HEM 154 A 1 
HETATM 39 N NA HEM . . . C 3 14.738 30.725 6.458 1 9.71 ? NA HEM 154 A 1 
HETATM 40 N NB HEM . . . C 3 13.651 28.129 6.326 1 11.19 ? NB HEM 154 A 1 
HETATM 41 N NC HEM . . . C 3 14.199 28.021 3.527 1 10.33 ? NC HEM 154 A 1 
HETATM 42 N ND HEM . . . C 3 15.328 30.622 3.693 1 11.56 ? ND HEM 154 A 1 
HETATM 43 FE FE HEM . . . C 3 14.414 29.395 4.996 1 12.59 ? FE HEM 154 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           287 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           43 
#