data_1XCO # _model_server_result.job_id ZaVVT5uq9ws7DkofM98yog _model_server_result.datetime_utc '2024-11-29 14:09:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1xco # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":408}' # _entry.id 1XCO # _exptl.entry_id 1XCO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 140.032 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ACETYLPHOSPHATE _entity.pdbx_number_of_molecules 23 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1XCO _cell.length_a 184.661 _cell.length_b 184.661 _cell.length_c 259.456 _cell.Z_PDB 72 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XCO _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 ? dimeric 2 author_defined_assembly 3 ? dimeric 2 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,G,H,I,J,K,L,M,N,O,GA,HA 1 1 C,D,P,Q,R,S,T,U,V,W,X,IA,JA 2 1 E,Y,Z,AA,BA,CA,KA 3 1,2 F,DA,EA,FA,LA 4 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 92.3305 159.921117 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 Q N N ? 3 R N N ? 3 S N N ? 3 T N N ? 3 U N N ? 3 V N N ? 3 W N N ? 3 X N N ? 3 Z N N ? 3 AA N N ? 3 BA N N ? 3 CA N N ? 3 DA N N ? 3 EA N N ? 3 FA N N # _chem_comp.formula 'C2 H5 O5 P' _chem_comp.formula_weight 140.032 _chem_comp.id UVW _chem_comp.mon_nstd_flag . _chem_comp.name ACETYLPHOSPHATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 UVW doub 334 n n C1 C1M UVW sing 335 n n C1 O2 UVW sing 336 n n C1M H1M1 UVW sing 337 n n C1M H1M2 UVW sing 338 n n C1M H1M3 UVW sing 339 n n O2 P UVW sing 340 n n P O1P UVW doub 341 n n P O2P UVW sing 342 n n P O3P UVW sing 343 n n O2P HOP2 UVW sing 344 n n O3P HOP3 UVW sing 345 n n # _atom_sites.entry_id 1XCO _atom_sites.fract_transf_matrix[1][1] 0.005415 _atom_sites.fract_transf_matrix[1][2] 0.003127 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006253 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003854 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 SO4 A 1 501 501 SO4 SO4 . H 3 UVW A 1 401 401 UVW UVW . I 3 UVW A 1 402 402 UVW UVW . J 3 UVW A 1 406 406 UVW UVW . K 3 UVW A 1 418 418 UVW UVW . L 3 UVW B 1 403 403 UVW UVW . M 3 UVW B 1 404 404 UVW UVW . N 3 UVW B 1 405 405 UVW UVW . O 3 UVW B 1 419 419 UVW UVW . P 2 SO4 C 1 502 502 SO4 SO4 . Q 3 UVW C 1 407 407 UVW UVW . R 3 UVW C 1 408 408 UVW UVW . S 3 UVW C 1 412 412 UVW UVW . T 3 UVW C 1 420 420 UVW UVW . U 3 UVW D 1 409 409 UVW UVW . V 3 UVW D 1 410 410 UVW UVW . W 3 UVW D 1 411 411 UVW UVW . X 3 UVW D 1 421 421 UVW UVW . Y 2 SO4 E 1 503 503 SO4 SO4 . Z 3 UVW E 1 413 413 UVW UVW . AA 3 UVW E 1 414 414 UVW UVW . BA 3 UVW E 1 415 415 UVW UVW . CA 3 UVW E 1 422 422 UVW UVW . DA 3 UVW F 1 416 416 UVW UVW . EA 3 UVW F 1 417 417 UVW UVW . FA 3 UVW F 1 423 423 UVW UVW . GA 4 HOH A 1 605 605 HOH HOH . GA 4 HOH A 2 608 608 HOH HOH . GA 4 HOH A 3 609 609 HOH HOH . GA 4 HOH A 4 617 617 HOH HOH . GA 4 HOH A 5 618 618 HOH HOH . GA 4 HOH A 6 622 622 HOH HOH . GA 4 HOH A 7 626 626 HOH HOH . GA 4 HOH A 8 628 628 HOH HOH . GA 4 HOH A 9 630 630 HOH HOH . GA 4 HOH A 10 634 634 HOH HOH . GA 4 HOH A 11 635 635 HOH HOH . GA 4 HOH A 12 638 638 HOH HOH . GA 4 HOH A 13 640 640 HOH HOH . GA 4 HOH A 14 642 642 HOH HOH . GA 4 HOH A 15 659 659 HOH HOH . GA 4 HOH A 16 661 661 HOH HOH . GA 4 HOH A 17 667 667 HOH HOH . GA 4 HOH A 18 674 674 HOH HOH . GA 4 HOH A 19 685 685 HOH HOH . GA 4 HOH A 20 688 688 HOH HOH . GA 4 HOH A 21 698 698 HOH HOH . GA 4 HOH A 22 700 700 HOH HOH . GA 4 HOH A 23 701 701 HOH HOH . HA 4 HOH B 1 606 606 HOH HOH . HA 4 HOH B 2 607 607 HOH HOH . HA 4 HOH B 3 611 611 HOH HOH . HA 4 HOH B 4 614 614 HOH HOH . HA 4 HOH B 5 616 616 HOH HOH . HA 4 HOH B 6 623 623 HOH HOH . HA 4 HOH B 7 649 649 HOH HOH . HA 4 HOH B 8 662 662 HOH HOH . HA 4 HOH B 9 668 668 HOH HOH . HA 4 HOH B 10 670 670 HOH HOH . HA 4 HOH B 11 681 681 HOH HOH . IA 4 HOH C 1 602 602 HOH HOH . IA 4 HOH C 2 613 613 HOH HOH . IA 4 HOH C 3 615 615 HOH HOH . IA 4 HOH C 4 624 624 HOH HOH . IA 4 HOH C 5 625 625 HOH HOH . IA 4 HOH C 6 633 633 HOH HOH . IA 4 HOH C 7 636 636 HOH HOH . IA 4 HOH C 8 641 641 HOH HOH . IA 4 HOH C 9 644 644 HOH HOH . IA 4 HOH C 10 645 645 HOH HOH . IA 4 HOH C 11 647 647 HOH HOH . IA 4 HOH C 12 650 650 HOH HOH . IA 4 HOH C 13 652 652 HOH HOH . IA 4 HOH C 14 654 654 HOH HOH . IA 4 HOH C 15 655 655 HOH HOH . IA 4 HOH C 16 656 656 HOH HOH . IA 4 HOH C 17 666 666 HOH HOH . IA 4 HOH C 18 673 673 HOH HOH . IA 4 HOH C 19 680 680 HOH HOH . IA 4 HOH C 20 689 689 HOH HOH . IA 4 HOH C 21 692 692 HOH HOH . JA 4 HOH D 1 604 604 HOH HOH . JA 4 HOH D 2 610 610 HOH HOH . JA 4 HOH D 3 612 612 HOH HOH . JA 4 HOH D 4 620 620 HOH HOH . JA 4 HOH D 5 629 629 HOH HOH . JA 4 HOH D 6 631 631 HOH HOH . JA 4 HOH D 7 646 646 HOH HOH . JA 4 HOH D 8 651 651 HOH HOH . JA 4 HOH D 9 663 663 HOH HOH . JA 4 HOH D 10 672 672 HOH HOH . JA 4 HOH D 11 679 679 HOH HOH . JA 4 HOH D 12 684 684 HOH HOH . JA 4 HOH D 13 686 686 HOH HOH . JA 4 HOH D 14 687 687 HOH HOH . JA 4 HOH D 15 694 694 HOH HOH . JA 4 HOH D 16 697 697 HOH HOH . KA 4 HOH E 1 601 601 HOH HOH . KA 4 HOH E 2 619 619 HOH HOH . KA 4 HOH E 3 621 621 HOH HOH . KA 4 HOH E 4 627 627 HOH HOH . KA 4 HOH E 5 637 637 HOH HOH . KA 4 HOH E 6 639 639 HOH HOH . KA 4 HOH E 7 648 648 HOH HOH . KA 4 HOH E 8 653 653 HOH HOH . KA 4 HOH E 9 657 657 HOH HOH . KA 4 HOH E 10 658 658 HOH HOH . KA 4 HOH E 11 660 660 HOH HOH . KA 4 HOH E 12 664 664 HOH HOH . KA 4 HOH E 13 665 665 HOH HOH . KA 4 HOH E 14 669 669 HOH HOH . KA 4 HOH E 15 671 671 HOH HOH . KA 4 HOH E 16 675 675 HOH HOH . KA 4 HOH E 17 676 676 HOH HOH . KA 4 HOH E 18 682 682 HOH HOH . KA 4 HOH E 19 683 683 HOH HOH . KA 4 HOH E 20 695 695 HOH HOH . KA 4 HOH E 21 696 696 HOH HOH . KA 4 HOH E 22 699 699 HOH HOH . KA 4 HOH E 23 702 702 HOH HOH . LA 4 HOH F 1 603 603 HOH HOH . LA 4 HOH F 2 632 632 HOH HOH . LA 4 HOH F 3 643 643 HOH HOH . LA 4 HOH F 4 677 677 HOH HOH . LA 4 HOH F 5 678 678 HOH HOH . LA 4 HOH F 6 690 690 HOH HOH . LA 4 HOH F 7 691 691 HOH HOH . LA 4 HOH F 8 693 693 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 UVW . . . R 3 86.853 82.772 -104.854 0.8 43.36 ? C1 UVW 408 C 1 HETATM 2 O O1 UVW . . . R 3 86.413 82.765 -106.066 0.8 33.81 ? O1 UVW 408 C 1 HETATM 3 C C1M UVW . . . R 3 88.024 82.999 -104.418 0.8 41.85 ? C1M UVW 408 C 1 HETATM 4 O O2 UVW . . . R 3 85.768 82.457 -103.694 0.8 47.73 ? O2 UVW 408 C 1 HETATM 5 P P UVW . . . R 3 85.099 83.863 -103.563 0.8 55.88 ? P UVW 408 C 1 HETATM 6 O O1P UVW . . . R 3 83.794 83.807 -102.782 0.8 53.01 ? O1P UVW 408 C 1 HETATM 7 O O2P UVW . . . R 3 86.055 84.673 -102.743 0.8 51.26 ? O2P UVW 408 C 1 HETATM 8 O O3P UVW . . . R 3 84.959 84.735 -104.948 0.8 40.03 ? O3P UVW 408 C 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 38 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #