data_1XCS # _model_server_result.job_id yANX9qhsxkuDi3XsTpRmPg _model_server_result.datetime_utc '2024-11-28 01:00:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1xcs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":63}' # _entry.id 1XCS # _exptl.entry_id 1XCS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1XCS _cell.length_a 28.659 _cell.length_b 53.473 _cell.length_c 40.691 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XCS _symmetry.cell_setting ? _symmetry.Int_Tables_number 21 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A N7 DG 2 A DG 2 1_555 C CO CO . A CO 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc2 C CO CO . A CO 64 1_555 G O HOH . A HOH 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc3 C CO CO . A CO 64 1_555 G O HOH . A HOH 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc4 C CO CO . A CO 64 1_555 G O HOH . A HOH 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc5 C CO CO . A CO 64 1_555 G O HOH . A HOH 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.902 ? metalc ? metalc6 C CO CO . A CO 64 1_555 G O HOH . A HOH 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? metalc ? metalc7 B OP2 DG 2 B DG 8 1_555 F BA BA . B BA 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.768 ? metalc ? metalc8 B OP2 DG 2 B DG 8 3_656 F BA BA . B BA 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.784 ? metalc ? metalc9 B OP2 DG 2 B DG 8 4_556 F BA BA . B BA 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.776 ? metalc ? metalc10 B OP2 DG 2 B DG 8 2_655 F BA BA . B BA 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.791 ? metalc ? metalc11 B N7 DG 6 B DG 12 1_555 E CO CO . B CO 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc12 B N7 DG 6 B DG 12 3_755 E CO CO . B CO 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc13 E CO CO . B CO 63 1_555 H O HOH . B HOH 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc14 E CO CO . B CO 63 1_555 H O HOH . B HOH 66 3_755 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc15 E CO CO . B CO 63 1_555 H O HOH . B HOH 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc16 E CO CO . B CO 63 1_555 H O HOH . B HOH 67 3_755 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? hydrog WATSON-CRICK hydrog1 A N1 DG 2 A DG 2 1_555 B N3 DC 5 B DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N2 DG 2 A DG 2 1_555 B O2 DC 5 B DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O6 DG 2 A DG 2 1_555 B N4 DC 5 B DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N3 DT 3 A DT 3 1_555 B N1 DA 4 B DA 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A O4 DT 3 A DT 3 1_555 B N6 DA 4 B DA 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A N1 DA 4 A DA 4 1_555 B N3 DT 3 B DT 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N6 DA 4 A DA 4 1_555 B O4 DT 3 B DT 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N3 DC 5 A DC 5 1_555 B N1 DG 2 B DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N4 DC 5 A DC 5 1_555 B O6 DG 2 B DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A O2 DC 5 A DC 5 1_555 B N2 DG 2 B DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1XCS _atom_sites.fract_transf_matrix[1][1] 0.034893 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018701 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024575 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CO A 1 64 14 CO CO . D 3 A4L A 1 71 1 A4L A4L . E 2 CO B 1 63 13 CO CO . F 4 BA B 1 65 15 BA BA . G 5 HOH A 1 72 3 HOH HOH . G 5 HOH A 2 73 6 HOH HOH . G 5 HOH A 3 74 8 HOH HOH . G 5 HOH A 4 75 14 HOH HOH . G 5 HOH A 5 76 15 HOH HOH . G 5 HOH A 6 77 18 HOH HOH . G 5 HOH A 7 78 19 HOH HOH . G 5 HOH A 8 79 20 HOH HOH . G 5 HOH A 9 80 22 HOH HOH . G 5 HOH A 10 81 23 HOH HOH . G 5 HOH A 11 82 24 HOH HOH . G 5 HOH A 12 83 27 HOH HOH . G 5 HOH A 13 84 35 HOH HOH . G 5 HOH A 14 85 36 HOH HOH . G 5 HOH A 15 86 42 HOH HOH . G 5 HOH A 16 87 45 HOH HOH . G 5 HOH A 17 88 50 HOH HOH . G 5 HOH A 18 89 54 HOH HOH . G 5 HOH A 19 90 58 HOH HOH . H 5 HOH B 1 66 1 HOH HOH . H 5 HOH B 2 67 2 HOH HOH . H 5 HOH B 3 68 4 HOH HOH . H 5 HOH B 4 69 5 HOH HOH . H 5 HOH B 5 70 7 HOH HOH . H 5 HOH B 6 71 9 HOH HOH . H 5 HOH B 7 72 10 HOH HOH . H 5 HOH B 8 73 11 HOH HOH . H 5 HOH B 9 74 12 HOH HOH . H 5 HOH B 10 75 13 HOH HOH . H 5 HOH B 11 76 17 HOH HOH . H 5 HOH B 12 77 21 HOH HOH . H 5 HOH B 13 78 25 HOH HOH . H 5 HOH B 14 79 28 HOH HOH . H 5 HOH B 15 80 29 HOH HOH . H 5 HOH B 16 81 30 HOH HOH . H 5 HOH B 17 82 31 HOH HOH . H 5 HOH B 18 83 33 HOH HOH . H 5 HOH B 19 84 34 HOH HOH . H 5 HOH B 20 85 37 HOH HOH . H 5 HOH B 21 86 38 HOH HOH . H 5 HOH B 22 87 44 HOH HOH . H 5 HOH B 23 88 46 HOH HOH . H 5 HOH B 24 89 51 HOH HOH . H 5 HOH B 25 90 56 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x 28.669 _atom_site.Cartn_y 13.76 _atom_site.Cartn_z -0.002 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 21.6 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 63 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 99 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #