data_1XD5 # _model_server_result.job_id 5tLho-TBi10wHDPD24BJOQ _model_server_result.datetime_utc '2025-03-03 03:11:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1xd5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1001}' # _entry.id 1XD5 # _exptl.entry_id 1XD5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1XD5 _cell.length_a 61.087 _cell.length_b 91.488 _cell.length_c 81.132 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XD5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 PISA dimeric 2 software_defined_assembly 5 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G 1 1 B,H 2 1 C,I 3 1 D,J 4 1 A,B,E,F,G,H 5 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 29 A CYS 29 1_555 A SG CYS 52 A CYS 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.975 ? disulf ? disulf2 B SG CYS 29 B CYS 29 1_555 B SG CYS 52 B CYS 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf3 C SG CYS 29 C CYS 29 1_555 C SG CYS 52 C CYS 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? disulf ? disulf4 D SG CYS 29 D CYS 29 1_555 D SG CYS 52 D CYS 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 273 n n S O2 SO4 doub 274 n n S O3 SO4 sing 275 n n S O4 SO4 sing 276 n n # _atom_sites.entry_id 1XD5 _atom_sites.fract_transf_matrix[1][1] 0.01637 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01093 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012326 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 SO4 A 1 1001 1001 SO4 SO4 . F 2 SO4 A 1 1002 1002 SO4 SO4 . G 3 HOH A 1 1003 1 HOH HOH . G 3 HOH A 2 1004 2 HOH HOH . G 3 HOH A 3 1005 10 HOH HOH . G 3 HOH A 4 1006 12 HOH HOH . G 3 HOH A 5 1007 13 HOH HOH . G 3 HOH A 6 1008 14 HOH HOH . G 3 HOH A 7 1009 21 HOH HOH . G 3 HOH A 8 1010 22 HOH HOH . G 3 HOH A 9 1011 24 HOH HOH . G 3 HOH A 10 1012 25 HOH HOH . G 3 HOH A 11 1013 26 HOH HOH . G 3 HOH A 12 1014 37 HOH HOH . G 3 HOH A 13 1015 40 HOH HOH . G 3 HOH A 14 1016 43 HOH HOH . G 3 HOH A 15 1017 44 HOH HOH . G 3 HOH A 16 1018 45 HOH HOH . G 3 HOH A 17 1019 46 HOH HOH . G 3 HOH A 18 1020 47 HOH HOH . G 3 HOH A 19 1021 51 HOH HOH . G 3 HOH A 20 1022 52 HOH HOH . G 3 HOH A 21 1023 53 HOH HOH . G 3 HOH A 22 1024 54 HOH HOH . G 3 HOH A 23 1025 60 HOH HOH . G 3 HOH A 24 1026 62 HOH HOH . G 3 HOH A 25 1027 68 HOH HOH . G 3 HOH A 26 1028 71 HOH HOH . G 3 HOH A 27 1029 72 HOH HOH . G 3 HOH A 28 1030 77 HOH HOH . G 3 HOH A 29 1031 79 HOH HOH . G 3 HOH A 30 1032 80 HOH HOH . G 3 HOH A 31 1033 81 HOH HOH . G 3 HOH A 32 1034 83 HOH HOH . G 3 HOH A 33 1035 96 HOH HOH . G 3 HOH A 34 1036 101 HOH HOH . G 3 HOH A 35 1037 103 HOH HOH . G 3 HOH A 36 1038 106 HOH HOH . G 3 HOH A 37 1039 107 HOH HOH . G 3 HOH A 38 1040 108 HOH HOH . G 3 HOH A 39 1041 111 HOH HOH . G 3 HOH A 40 1042 113 HOH HOH . G 3 HOH A 41 1043 114 HOH HOH . G 3 HOH A 42 1044 119 HOH HOH . G 3 HOH A 43 1045 122 HOH HOH . G 3 HOH A 44 1046 125 HOH HOH . G 3 HOH A 45 1047 127 HOH HOH . G 3 HOH A 46 1048 130 HOH HOH . G 3 HOH A 47 1049 135 HOH HOH . G 3 HOH A 48 1050 137 HOH HOH . G 3 HOH A 49 1051 138 HOH HOH . G 3 HOH A 50 1052 139 HOH HOH . G 3 HOH A 51 1053 147 HOH HOH . G 3 HOH A 52 1054 150 HOH HOH . G 3 HOH A 53 1055 153 HOH HOH . G 3 HOH A 54 1056 158 HOH HOH . G 3 HOH A 55 1057 170 HOH HOH . G 3 HOH A 56 1058 172 HOH HOH . G 3 HOH A 57 1059 175 HOH HOH . G 3 HOH A 58 1060 176 HOH HOH . G 3 HOH A 59 1061 177 HOH HOH . G 3 HOH A 60 1062 181 HOH HOH . G 3 HOH A 61 1063 184 HOH HOH . G 3 HOH A 62 1064 187 HOH HOH . G 3 HOH A 63 1065 189 HOH HOH . G 3 HOH A 64 1066 192 HOH HOH . G 3 HOH A 65 1067 199 HOH HOH . G 3 HOH A 66 1068 200 HOH HOH . G 3 HOH A 67 1069 205 HOH HOH . G 3 HOH A 68 1070 207 HOH HOH . G 3 HOH A 69 1071 209 HOH HOH . G 3 HOH A 70 1072 210 HOH HOH . G 3 HOH A 71 1073 211 HOH HOH . G 3 HOH A 72 1074 213 HOH HOH . G 3 HOH A 73 1075 214 HOH HOH . G 3 HOH A 74 1076 217 HOH HOH . G 3 HOH A 75 1077 220 HOH HOH . G 3 HOH A 76 1078 222 HOH HOH . G 3 HOH A 77 1079 224 HOH HOH . G 3 HOH A 78 1080 225 HOH HOH . G 3 HOH A 79 1081 226 HOH HOH . G 3 HOH A 80 1082 235 HOH HOH . G 3 HOH A 81 1083 242 HOH HOH . G 3 HOH A 82 1084 244 HOH HOH . H 3 HOH B 1 113 4 HOH HOH . H 3 HOH B 2 114 5 HOH HOH . H 3 HOH B 3 115 7 HOH HOH . H 3 HOH B 4 116 8 HOH HOH . H 3 HOH B 5 117 9 HOH HOH . H 3 HOH B 6 118 11 HOH HOH . H 3 HOH B 7 119 15 HOH HOH . H 3 HOH B 8 120 16 HOH HOH . H 3 HOH B 9 121 17 HOH HOH . H 3 HOH B 10 122 18 HOH HOH . H 3 HOH B 11 123 19 HOH HOH . H 3 HOH B 12 124 28 HOH HOH . H 3 HOH B 13 125 29 HOH HOH . H 3 HOH B 14 126 30 HOH HOH . H 3 HOH B 15 127 32 HOH HOH . H 3 HOH B 16 128 34 HOH HOH . H 3 HOH B 17 129 35 HOH HOH . H 3 HOH B 18 130 39 HOH HOH . H 3 HOH B 19 131 48 HOH HOH . H 3 HOH B 20 132 49 HOH HOH . H 3 HOH B 21 133 55 HOH HOH . H 3 HOH B 22 134 57 HOH HOH . H 3 HOH B 23 135 58 HOH HOH . H 3 HOH B 24 136 59 HOH HOH . H 3 HOH B 25 137 61 HOH HOH . H 3 HOH B 26 138 66 HOH HOH . H 3 HOH B 27 139 69 HOH HOH . H 3 HOH B 28 140 70 HOH HOH . H 3 HOH B 29 141 73 HOH HOH . H 3 HOH B 30 142 75 HOH HOH . H 3 HOH B 31 143 76 HOH HOH . H 3 HOH B 32 144 78 HOH HOH . H 3 HOH B 33 145 82 HOH HOH . H 3 HOH B 34 146 84 HOH HOH . H 3 HOH B 35 147 87 HOH HOH . H 3 HOH B 36 148 91 HOH HOH . H 3 HOH B 37 149 92 HOH HOH . H 3 HOH B 38 150 93 HOH HOH . H 3 HOH B 39 151 102 HOH HOH . H 3 HOH B 40 152 105 HOH HOH . H 3 HOH B 41 153 109 HOH HOH . H 3 HOH B 42 154 110 HOH HOH . H 3 HOH B 43 155 112 HOH HOH . H 3 HOH B 44 156 126 HOH HOH . H 3 HOH B 45 157 128 HOH HOH . H 3 HOH B 46 158 129 HOH HOH . H 3 HOH B 47 159 131 HOH HOH . H 3 HOH B 48 160 132 HOH HOH . H 3 HOH B 49 161 140 HOH HOH . H 3 HOH B 50 162 141 HOH HOH . H 3 HOH B 51 163 143 HOH HOH . H 3 HOH B 52 164 144 HOH HOH . H 3 HOH B 53 165 149 HOH HOH . H 3 HOH B 54 166 151 HOH HOH . H 3 HOH B 55 167 152 HOH HOH . H 3 HOH B 56 168 154 HOH HOH . H 3 HOH B 57 169 156 HOH HOH . H 3 HOH B 58 170 157 HOH HOH . H 3 HOH B 59 171 159 HOH HOH . H 3 HOH B 60 172 162 HOH HOH . H 3 HOH B 61 173 164 HOH HOH . H 3 HOH B 62 174 166 HOH HOH . H 3 HOH B 63 175 167 HOH HOH . H 3 HOH B 64 176 174 HOH HOH . H 3 HOH B 65 177 180 HOH HOH . H 3 HOH B 66 178 183 HOH HOH . H 3 HOH B 67 179 185 HOH HOH . H 3 HOH B 68 180 188 HOH HOH . H 3 HOH B 69 181 196 HOH HOH . H 3 HOH B 70 182 201 HOH HOH . H 3 HOH B 71 183 202 HOH HOH . H 3 HOH B 72 184 203 HOH HOH . H 3 HOH B 73 185 204 HOH HOH . H 3 HOH B 74 186 218 HOH HOH . H 3 HOH B 75 187 228 HOH HOH . H 3 HOH B 76 188 229 HOH HOH . H 3 HOH B 77 189 233 HOH HOH . H 3 HOH B 78 190 234 HOH HOH . H 3 HOH B 79 191 241 HOH HOH . H 3 HOH B 80 192 243 HOH HOH . H 3 HOH B 81 193 248 HOH HOH . H 3 HOH B 82 194 250 HOH HOH . H 3 HOH B 83 195 251 HOH HOH . H 3 HOH B 84 196 252 HOH HOH . H 3 HOH B 85 197 256 HOH HOH . H 3 HOH B 86 198 257 HOH HOH . H 3 HOH B 87 199 259 HOH HOH . I 3 HOH C 1 113 3 HOH HOH . I 3 HOH C 2 114 6 HOH HOH . I 3 HOH C 3 115 20 HOH HOH . I 3 HOH C 4 116 23 HOH HOH . I 3 HOH C 5 117 27 HOH HOH . I 3 HOH C 6 118 31 HOH HOH . I 3 HOH C 7 119 33 HOH HOH . I 3 HOH C 8 120 42 HOH HOH . I 3 HOH C 9 121 56 HOH HOH . I 3 HOH C 10 122 63 HOH HOH . I 3 HOH C 11 123 64 HOH HOH . I 3 HOH C 12 124 65 HOH HOH . I 3 HOH C 13 125 67 HOH HOH . I 3 HOH C 14 126 85 HOH HOH . I 3 HOH C 15 127 86 HOH HOH . I 3 HOH C 16 128 89 HOH HOH . I 3 HOH C 17 129 97 HOH HOH . I 3 HOH C 18 130 104 HOH HOH . I 3 HOH C 19 131 120 HOH HOH . I 3 HOH C 20 132 133 HOH HOH . I 3 HOH C 21 133 134 HOH HOH . I 3 HOH C 22 134 136 HOH HOH . I 3 HOH C 23 135 142 HOH HOH . I 3 HOH C 24 136 145 HOH HOH . I 3 HOH C 25 137 155 HOH HOH . I 3 HOH C 26 138 160 HOH HOH . I 3 HOH C 27 139 168 HOH HOH . I 3 HOH C 28 140 169 HOH HOH . I 3 HOH C 29 141 171 HOH HOH . I 3 HOH C 30 142 173 HOH HOH . I 3 HOH C 31 143 178 HOH HOH . I 3 HOH C 32 144 182 HOH HOH . I 3 HOH C 33 145 198 HOH HOH . I 3 HOH C 34 146 206 HOH HOH . I 3 HOH C 35 147 208 HOH HOH . I 3 HOH C 36 148 212 HOH HOH . I 3 HOH C 37 149 216 HOH HOH . I 3 HOH C 38 150 221 HOH HOH . I 3 HOH C 39 151 223 HOH HOH . I 3 HOH C 40 152 230 HOH HOH . I 3 HOH C 41 153 231 HOH HOH . I 3 HOH C 42 154 232 HOH HOH . I 3 HOH C 43 155 236 HOH HOH . I 3 HOH C 44 156 237 HOH HOH . I 3 HOH C 45 157 238 HOH HOH . I 3 HOH C 46 158 240 HOH HOH . I 3 HOH C 47 159 246 HOH HOH . I 3 HOH C 48 160 247 HOH HOH . I 3 HOH C 49 161 249 HOH HOH . I 3 HOH C 50 162 253 HOH HOH . I 3 HOH C 51 163 264 HOH HOH . J 3 HOH D 1 113 36 HOH HOH . J 3 HOH D 2 114 38 HOH HOH . J 3 HOH D 3 115 41 HOH HOH . J 3 HOH D 4 116 50 HOH HOH . J 3 HOH D 5 117 74 HOH HOH . J 3 HOH D 6 118 88 HOH HOH . J 3 HOH D 7 119 90 HOH HOH . J 3 HOH D 8 120 94 HOH HOH . J 3 HOH D 9 121 95 HOH HOH . J 3 HOH D 10 122 98 HOH HOH . J 3 HOH D 11 123 99 HOH HOH . J 3 HOH D 12 124 100 HOH HOH . J 3 HOH D 13 125 115 HOH HOH . J 3 HOH D 14 126 116 HOH HOH . J 3 HOH D 15 127 117 HOH HOH . J 3 HOH D 16 128 118 HOH HOH . J 3 HOH D 17 129 121 HOH HOH . J 3 HOH D 18 130 123 HOH HOH . J 3 HOH D 19 131 124 HOH HOH . J 3 HOH D 20 132 146 HOH HOH . J 3 HOH D 21 133 148 HOH HOH . J 3 HOH D 22 134 161 HOH HOH . J 3 HOH D 23 135 163 HOH HOH . J 3 HOH D 24 136 165 HOH HOH . J 3 HOH D 25 137 179 HOH HOH . J 3 HOH D 26 138 186 HOH HOH . J 3 HOH D 27 139 190 HOH HOH . J 3 HOH D 28 140 191 HOH HOH . J 3 HOH D 29 141 193 HOH HOH . J 3 HOH D 30 142 194 HOH HOH . J 3 HOH D 31 143 195 HOH HOH . J 3 HOH D 32 144 197 HOH HOH . J 3 HOH D 33 145 215 HOH HOH . J 3 HOH D 34 146 219 HOH HOH . J 3 HOH D 35 147 227 HOH HOH . J 3 HOH D 36 148 239 HOH HOH . J 3 HOH D 37 149 245 HOH HOH . J 3 HOH D 38 150 254 HOH HOH . J 3 HOH D 39 151 255 HOH HOH . J 3 HOH D 40 152 258 HOH HOH . J 3 HOH D 41 153 260 HOH HOH . J 3 HOH D 42 154 261 HOH HOH . J 3 HOH D 43 155 262 HOH HOH . J 3 HOH D 44 156 263 HOH HOH . J 3 HOH D 45 157 265 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . E 2 1.254 9.553 -0.718 1 16.56 ? S SO4 1001 A 1 HETATM 2 O O1 SO4 . . . E 2 0.456 10.672 -0.255 1 18.52 ? O1 SO4 1001 A 1 HETATM 3 O O2 SO4 . . . E 2 1.97 9.98 -1.904 1 18.71 ? O2 SO4 1001 A 1 HETATM 4 O O3 SO4 . . . E 2 0.404 8.412 -1.032 1 14.62 ? O3 SO4 1001 A 1 HETATM 5 O O4 SO4 . . . E 2 2.225 9.172 0.293 1 16.99 ? O4 SO4 1001 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #