data_1XDG
#
_model_server_result.job_id            fLGjWxgFlrwi7TUbhCXydA 
_model_server_result.datetime_utc      '2024-11-05 01:22:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1xdg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":312}' 
#
_entry.id    1XDG 
#
_exptl.entry_id    1XDG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1XDG 
_cell.length_a            71.9 
_cell.length_b            77.4 
_cell.length_c            92.3 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1XDG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 G O HOH . A HOH 3 1_555 C MG MG . A MG 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? 
metalc ? metalc2 G O HOH . A HOH 18 1_555 C MG MG . A MG 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? 
metalc ? metalc3 G O HOH . A HOH 23 1_555 C MG MG . A MG 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.905 ? 
metalc ? metalc4 A OG SER 16 A SER 139 1_555 C MG MG . A MG 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? 
metalc ? metalc5 A OG SER 18 A SER 141 1_555 C MG MG . A MG 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.905 ? 
metalc ? metalc6 A OD1 ASP 116 A ASP 239 1_555 C MG MG . A MG 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.95 ? 
metalc ? metalc7 B OD1 ASP 14 B ASP 137 1_555 E MG MG . B MG 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.989 ? 
metalc ? metalc8 B OG SER 16 B SER 139 1_555 E MG MG . B MG 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? 
metalc ? metalc9 B OG SER 18 B SER 141 1_555 E MG MG . B MG 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.009 ? 
metalc ? metalc10 B OD1 ASP 116 B ASP 239 1_555 E MG MG . B MG 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? 
metalc ? metalc11 E MG MG . B MG 312 1_555 H O HOH . B HOH 558 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.037 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1XDG 
_atom_sites.fract_transf_matrix[1][1]    0.013908 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01292 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010834 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MG A 1 312 1 MG MG . 
D 3 AB8 A 1 401 1 AB8 ABE . 
E 2 MG B 1 312 2 MG MG . 
F 3 AB8 B 1 501 1 AB8 ABE . 
G 4 HOH A 1 1 1 HOH HOH . 
G 4 HOH A 2 2 2 HOH HOH . 
G 4 HOH A 3 3 3 HOH HOH . 
G 4 HOH A 4 4 4 HOH HOH . 
G 4 HOH A 5 6 6 HOH HOH . 
G 4 HOH A 6 7 7 HOH HOH . 
G 4 HOH A 7 8 8 HOH HOH . 
G 4 HOH A 8 10 10 HOH HOH . 
G 4 HOH A 9 11 11 HOH HOH . 
G 4 HOH A 10 13 13 HOH HOH . 
G 4 HOH A 11 14 14 HOH HOH . 
G 4 HOH A 12 15 15 HOH HOH . 
G 4 HOH A 13 16 16 HOH HOH . 
G 4 HOH A 14 17 17 HOH HOH . 
G 4 HOH A 15 18 18 HOH HOH . 
G 4 HOH A 16 19 19 HOH HOH . 
G 4 HOH A 17 20 20 HOH HOH . 
G 4 HOH A 18 21 21 HOH HOH . 
G 4 HOH A 19 22 22 HOH HOH . 
G 4 HOH A 20 23 23 HOH HOH . 
G 4 HOH A 21 24 24 HOH HOH . 
G 4 HOH A 22 25 25 HOH HOH . 
G 4 HOH A 23 26 26 HOH HOH . 
G 4 HOH A 24 28 28 HOH HOH . 
G 4 HOH A 25 29 29 HOH HOH . 
G 4 HOH A 26 30 30 HOH HOH . 
G 4 HOH A 27 31 31 HOH HOH . 
G 4 HOH A 28 32 32 HOH HOH . 
G 4 HOH A 29 33 33 HOH HOH . 
G 4 HOH A 30 34 34 HOH HOH . 
G 4 HOH A 31 35 35 HOH HOH . 
G 4 HOH A 32 37 37 HOH HOH . 
G 4 HOH A 33 39 39 HOH HOH . 
G 4 HOH A 34 40 40 HOH HOH . 
G 4 HOH A 35 41 41 HOH HOH . 
G 4 HOH A 36 42 42 HOH HOH . 
G 4 HOH A 37 43 43 HOH HOH . 
G 4 HOH A 38 44 44 HOH HOH . 
G 4 HOH A 39 45 45 HOH HOH . 
G 4 HOH A 40 46 46 HOH HOH . 
G 4 HOH A 41 47 47 HOH HOH . 
G 4 HOH A 42 48 48 HOH HOH . 
G 4 HOH A 43 49 49 HOH HOH . 
G 4 HOH A 44 50 50 HOH HOH . 
G 4 HOH A 45 51 51 HOH HOH . 
G 4 HOH A 46 52 52 HOH HOH . 
G 4 HOH A 47 53 53 HOH HOH . 
G 4 HOH A 48 54 54 HOH HOH . 
G 4 HOH A 49 55 55 HOH HOH . 
G 4 HOH A 50 56 56 HOH HOH . 
G 4 HOH A 51 57 57 HOH HOH . 
G 4 HOH A 52 58 58 HOH HOH . 
G 4 HOH A 53 59 59 HOH HOH . 
G 4 HOH A 54 60 60 HOH HOH . 
G 4 HOH A 55 61 61 HOH HOH . 
G 4 HOH A 56 62 62 HOH HOH . 
G 4 HOH A 57 63 63 HOH HOH . 
G 4 HOH A 58 64 64 HOH HOH . 
G 4 HOH A 59 65 65 HOH HOH . 
G 4 HOH A 60 66 66 HOH HOH . 
G 4 HOH A 61 67 67 HOH HOH . 
G 4 HOH A 62 68 68 HOH HOH . 
G 4 HOH A 63 69 69 HOH HOH . 
G 4 HOH A 64 70 70 HOH HOH . 
G 4 HOH A 65 71 71 HOH HOH . 
G 4 HOH A 66 72 72 HOH HOH . 
G 4 HOH A 67 73 73 HOH HOH . 
G 4 HOH A 68 74 74 HOH HOH . 
G 4 HOH A 69 75 75 HOH HOH . 
G 4 HOH A 70 76 76 HOH HOH . 
G 4 HOH A 71 77 77 HOH HOH . 
G 4 HOH A 72 78 78 HOH HOH . 
G 4 HOH A 73 79 79 HOH HOH . 
G 4 HOH A 74 80 80 HOH HOH . 
G 4 HOH A 75 81 81 HOH HOH . 
G 4 HOH A 76 82 82 HOH HOH . 
G 4 HOH A 77 84 84 HOH HOH . 
G 4 HOH A 78 85 85 HOH HOH . 
G 4 HOH A 79 86 86 HOH HOH . 
G 4 HOH A 80 87 87 HOH HOH . 
G 4 HOH A 81 88 88 HOH HOH . 
G 4 HOH A 82 89 89 HOH HOH . 
G 4 HOH A 83 90 90 HOH HOH . 
G 4 HOH A 84 91 91 HOH HOH . 
G 4 HOH A 85 102 2 HOH HOH . 
G 4 HOH A 86 119 19 HOH HOH . 
H 4 HOH B 1 502 5 HOH HOH . 
H 4 HOH B 2 503 9 HOH HOH . 
H 4 HOH B 3 504 12 HOH HOH . 
H 4 HOH B 4 505 27 HOH HOH . 
H 4 HOH B 5 506 36 HOH HOH . 
H 4 HOH B 6 507 38 HOH HOH . 
H 4 HOH B 7 508 83 HOH HOH . 
H 4 HOH B 8 509 1 HOH HOH . 
H 4 HOH B 9 510 3 HOH HOH . 
H 4 HOH B 10 511 4 HOH HOH . 
H 4 HOH B 11 512 5 HOH HOH . 
H 4 HOH B 12 513 6 HOH HOH . 
H 4 HOH B 13 514 7 HOH HOH . 
H 4 HOH B 14 515 8 HOH HOH . 
H 4 HOH B 15 516 9 HOH HOH . 
H 4 HOH B 16 517 10 HOH HOH . 
H 4 HOH B 17 518 11 HOH HOH . 
H 4 HOH B 18 519 12 HOH HOH . 
H 4 HOH B 19 520 13 HOH HOH . 
H 4 HOH B 20 521 14 HOH HOH . 
H 4 HOH B 21 522 15 HOH HOH . 
H 4 HOH B 22 523 16 HOH HOH . 
H 4 HOH B 23 524 17 HOH HOH . 
H 4 HOH B 24 525 18 HOH HOH . 
H 4 HOH B 25 526 20 HOH HOH . 
H 4 HOH B 26 527 21 HOH HOH . 
H 4 HOH B 27 528 22 HOH HOH . 
H 4 HOH B 28 529 23 HOH HOH . 
H 4 HOH B 29 530 24 HOH HOH . 
H 4 HOH B 30 531 25 HOH HOH . 
H 4 HOH B 31 532 26 HOH HOH . 
H 4 HOH B 32 533 27 HOH HOH . 
H 4 HOH B 33 534 28 HOH HOH . 
H 4 HOH B 34 535 29 HOH HOH . 
H 4 HOH B 35 536 30 HOH HOH . 
H 4 HOH B 36 537 31 HOH HOH . 
H 4 HOH B 37 538 32 HOH HOH . 
H 4 HOH B 38 539 33 HOH HOH . 
H 4 HOH B 39 540 34 HOH HOH . 
H 4 HOH B 40 541 35 HOH HOH . 
H 4 HOH B 41 542 36 HOH HOH . 
H 4 HOH B 42 543 37 HOH HOH . 
H 4 HOH B 43 544 38 HOH HOH . 
H 4 HOH B 44 545 39 HOH HOH . 
H 4 HOH B 45 546 40 HOH HOH . 
H 4 HOH B 46 547 41 HOH HOH . 
H 4 HOH B 47 548 42 HOH HOH . 
H 4 HOH B 48 549 43 HOH HOH . 
H 4 HOH B 49 550 44 HOH HOH . 
H 4 HOH B 50 551 45 HOH HOH . 
H 4 HOH B 51 552 46 HOH HOH . 
H 4 HOH B 52 553 47 HOH HOH . 
H 4 HOH B 53 554 48 HOH HOH . 
H 4 HOH B 54 555 49 HOH HOH . 
H 4 HOH B 55 556 50 HOH HOH . 
H 4 HOH B 56 557 51 HOH HOH . 
H 4 HOH B 57 558 52 HOH HOH . 
H 4 HOH B 58 559 53 HOH HOH . 
H 4 HOH B 59 560 54 HOH HOH . 
H 4 HOH B 60 561 55 HOH HOH . 
H 4 HOH B 61 562 56 HOH HOH . 
H 4 HOH B 62 563 57 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               48.416 
_atom_site.Cartn_y               -1.936 
_atom_site.Cartn_z               22.894 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        35.43 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           312 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           323 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#