data_1XDM
#
_model_server_result.job_id            lSvA8dpPhY0NHv5iRLaRHw 
_model_server_result.datetime_utc      '2024-11-04 20:34:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1xdm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":364}' 
#
_entry.id    1XDM 
#
_exptl.entry_id    1XDM 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1XDM 
_cell.length_a            153.421 
_cell.length_b            153.475 
_cell.length_c            185.553 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1XDM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
PISA dimeric 2 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,I,J,Q,R 1 1 
C,D,K,L,S,T 2 1 
E,F,M,N,U,V 3 1 
G,H,O,P,W,X 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
? 2 O N N 
? 2 P N N 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 290 n n 
S O2 SO4 doub 291 n n 
S O3 SO4 sing 292 n n 
S O4 SO4 sing 293 n n 
#
_atom_sites.entry_id                     1XDM 
_atom_sites.fract_transf_matrix[1][1]    0.006518 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006516 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005389 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 2 SO4 A 1 364 14 SO4 SO4 . 
J 2 SO4 B 1 364 10 SO4 SO4 . 
K 2 SO4 C 1 364 13 SO4 SO4 . 
L 2 SO4 C 1 365 15 SO4 SO4 . 
M 2 SO4 W 1 364 9 SO4 SO4 . 
N 2 SO4 X 1 364 11 SO4 SO4 . 
O 2 SO4 Y 1 364 12 SO4 SO4 . 
P 2 SO4 Z 1 364 16 SO4 SO4 . 
Q 3 HOH A 1 365 6 HOH TIP . 
Q 3 HOH A 2 366 17 HOH TIP . 
Q 3 HOH A 3 367 33 HOH TIP . 
Q 3 HOH A 4 368 45 HOH TIP . 
R 3 HOH B 1 365 7 HOH TIP . 
R 3 HOH B 2 366 31 HOH TIP . 
R 3 HOH B 3 367 40 HOH TIP . 
R 3 HOH B 4 368 42 HOH TIP . 
R 3 HOH B 5 369 54 HOH TIP . 
S 3 HOH C 1 366 9 HOH TIP . 
S 3 HOH C 2 367 49 HOH TIP . 
S 3 HOH C 3 368 55 HOH TIP . 
T 3 HOH D 1 364 2 HOH TIP . 
T 3 HOH D 2 365 19 HOH TIP . 
T 3 HOH D 3 366 28 HOH TIP . 
T 3 HOH D 4 367 34 HOH TIP . 
U 3 HOH W 1 365 1 HOH TIP . 
U 3 HOH W 2 366 18 HOH TIP . 
U 3 HOH W 3 367 25 HOH TIP . 
U 3 HOH W 4 368 32 HOH TIP . 
U 3 HOH W 5 369 35 HOH TIP . 
V 3 HOH X 1 365 13 HOH TIP . 
V 3 HOH X 2 366 20 HOH TIP . 
V 3 HOH X 3 367 22 HOH TIP . 
W 3 HOH Y 1 365 15 HOH TIP . 
W 3 HOH Y 2 366 41 HOH TIP . 
W 3 HOH Y 3 367 43 HOH TIP . 
W 3 HOH Y 4 368 47 HOH TIP . 
W 3 HOH Y 5 369 50 HOH TIP . 
W 3 HOH Y 6 370 51 HOH TIP . 
X 3 HOH Z 1 365 3 HOH TIP . 
X 3 HOH Z 2 366 36 HOH TIP . 
X 3 HOH Z 3 367 44 HOH TIP . 
X 3 HOH Z 4 368 48 HOH TIP . 
X 3 HOH Z 5 369 56 HOH TIP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . K 2 96.615 47.87 99.68 1 92.42 ? S SO4 364 C 1 
HETATM 2 O O1 SO4 . . . K 2 96.323 49.192 100.275 1 92.42 ? O1 SO4 364 C 1 
HETATM 3 O O2 SO4 . . . K 2 95.79 46.842 100.347 1 92.42 ? O2 SO4 364 C 1 
HETATM 4 O O3 SO4 . . . K 2 96.256 47.917 98.247 1 92.42 ? O3 SO4 364 C 1 
HETATM 5 O O4 SO4 . . . K 2 98.058 47.542 99.837 1 92.42 ? O4 SO4 364 C 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           239 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           5 
#