data_1XF0 # _model_server_result.job_id TK_RUGnxbIuzeWWTi-gfZw _model_server_result.datetime_utc '2024-11-24 07:38:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1xf0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":600}' # _entry.id 1XF0 # _exptl.entry_id 1XF0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 286.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-ANDROSTENE-3-17-DIONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1XF0 _cell.length_a 110.579 _cell.length_b 110.579 _cell.length_c 56.886 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XF0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H26 O2' _chem_comp.formula_weight 286.409 _chem_comp.id ASD _chem_comp.mon_nstd_flag . _chem_comp.name 4-ANDROSTENE-3-17-DIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C10 ASD sing 45 n n C1 C2 ASD sing 46 n n C1 H11 ASD sing 47 n n C1 H12 ASD sing 48 n n C10 C19 ASD sing 49 n n C10 C5 ASD sing 50 n n C10 C9 ASD sing 51 n n C11 C12 ASD sing 52 n n C11 C9 ASD sing 53 n n C11 H111 ASD sing 54 n n C11 H112 ASD sing 55 n n C12 C13 ASD sing 56 n n C12 H121 ASD sing 57 n n C12 H122 ASD sing 58 n n C13 C14 ASD sing 59 n n C13 C17 ASD sing 60 n n C13 C18 ASD sing 61 n n C14 C15 ASD sing 62 n n C14 C8 ASD sing 63 n n C14 H14 ASD sing 64 n n C15 C16 ASD sing 65 n n C15 H151 ASD sing 66 n n C15 H152 ASD sing 67 n n C16 C17 ASD sing 68 n n C16 H161 ASD sing 69 n n C16 H162 ASD sing 70 n n C17 O2 ASD doub 71 n n C18 H181 ASD sing 72 n n C18 H182 ASD sing 73 n n C18 H183 ASD sing 74 n n C19 H191 ASD sing 75 n n C19 H192 ASD sing 76 n n C19 H193 ASD sing 77 n n C2 C3 ASD sing 78 n n C2 H21 ASD sing 79 n n C2 H22 ASD sing 80 n n C3 C4 ASD sing 81 n n C3 O1 ASD doub 82 n n C4 C5 ASD doub 83 n n C4 H4 ASD sing 84 n n C5 C6 ASD sing 85 n n C6 C7 ASD sing 86 n n C6 H61 ASD sing 87 n n C6 H62 ASD sing 88 n n C7 C8 ASD sing 89 n n C7 H71 ASD sing 90 n n C7 H72 ASD sing 91 n n C8 C9 ASD sing 92 n n C8 H8 ASD sing 93 n n C9 H9 ASD sing 94 n n # _atom_sites.entry_id 1XF0 _atom_sites.fract_transf_matrix[1][1] 0.009043 _atom_sites.fract_transf_matrix[1][2] 0.005221 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010442 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017579 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACT A 1 700 700 ACT ACT . C 3 NAP A 1 500 500 NAP NAP . D 4 ASD A 1 600 600 ASD ASD . E 5 HOH A 1 701 5 HOH HOH . E 5 HOH A 2 702 6 HOH HOH . E 5 HOH A 3 703 7 HOH HOH . E 5 HOH A 4 704 8 HOH HOH . E 5 HOH A 5 705 10 HOH HOH . E 5 HOH A 6 706 11 HOH HOH . E 5 HOH A 7 707 12 HOH HOH . E 5 HOH A 8 708 13 HOH HOH . E 5 HOH A 9 709 15 HOH HOH . E 5 HOH A 10 710 16 HOH HOH . E 5 HOH A 11 711 17 HOH HOH . E 5 HOH A 12 712 18 HOH HOH . E 5 HOH A 13 713 19 HOH HOH . E 5 HOH A 14 714 20 HOH HOH . E 5 HOH A 15 715 21 HOH HOH . E 5 HOH A 16 716 22 HOH HOH . E 5 HOH A 17 717 23 HOH HOH . E 5 HOH A 18 718 24 HOH HOH . E 5 HOH A 19 719 25 HOH HOH . E 5 HOH A 20 720 26 HOH HOH . E 5 HOH A 21 721 27 HOH HOH . E 5 HOH A 22 722 28 HOH HOH . E 5 HOH A 23 723 29 HOH HOH . E 5 HOH A 24 724 30 HOH HOH . E 5 HOH A 25 725 31 HOH HOH . E 5 HOH A 26 726 32 HOH HOH . E 5 HOH A 27 727 34 HOH HOH . E 5 HOH A 28 728 35 HOH HOH . E 5 HOH A 29 729 36 HOH HOH . E 5 HOH A 30 730 37 HOH HOH . E 5 HOH A 31 731 38 HOH HOH . E 5 HOH A 32 732 39 HOH HOH . E 5 HOH A 33 733 41 HOH HOH . E 5 HOH A 34 734 42 HOH HOH . E 5 HOH A 35 735 43 HOH HOH . E 5 HOH A 36 736 44 HOH HOH . E 5 HOH A 37 737 45 HOH HOH . E 5 HOH A 38 738 50 HOH HOH . E 5 HOH A 39 739 52 HOH HOH . E 5 HOH A 40 740 53 HOH HOH . E 5 HOH A 41 741 54 HOH HOH . E 5 HOH A 42 742 55 HOH HOH . E 5 HOH A 43 743 56 HOH HOH . E 5 HOH A 44 744 59 HOH HOH . E 5 HOH A 45 745 60 HOH HOH . E 5 HOH A 46 746 61 HOH HOH . E 5 HOH A 47 747 62 HOH HOH . E 5 HOH A 48 748 63 HOH HOH . E 5 HOH A 49 749 64 HOH HOH . E 5 HOH A 50 750 65 HOH HOH . E 5 HOH A 51 751 66 HOH HOH . E 5 HOH A 52 752 67 HOH HOH . E 5 HOH A 53 753 68 HOH HOH . E 5 HOH A 54 754 69 HOH HOH . E 5 HOH A 55 755 70 HOH HOH . E 5 HOH A 56 756 71 HOH HOH . E 5 HOH A 57 757 72 HOH HOH . E 5 HOH A 58 758 74 HOH HOH . E 5 HOH A 59 759 75 HOH HOH . E 5 HOH A 60 760 76 HOH HOH . E 5 HOH A 61 761 77 HOH HOH . E 5 HOH A 62 762 78 HOH HOH . E 5 HOH A 63 763 79 HOH HOH . E 5 HOH A 64 764 80 HOH HOH . E 5 HOH A 65 765 81 HOH HOH . E 5 HOH A 66 766 82 HOH HOH . E 5 HOH A 67 767 83 HOH HOH . E 5 HOH A 68 768 84 HOH HOH . E 5 HOH A 69 769 88 HOH HOH . E 5 HOH A 70 770 89 HOH HOH . E 5 HOH A 71 771 90 HOH HOH . E 5 HOH A 72 772 91 HOH HOH . E 5 HOH A 73 773 92 HOH HOH . E 5 HOH A 74 774 93 HOH HOH . E 5 HOH A 75 775 94 HOH HOH . E 5 HOH A 76 776 95 HOH HOH . E 5 HOH A 77 777 96 HOH HOH . E 5 HOH A 78 778 97 HOH HOH . E 5 HOH A 79 779 98 HOH HOH . E 5 HOH A 80 780 99 HOH HOH . E 5 HOH A 81 781 100 HOH HOH . E 5 HOH A 82 782 102 HOH HOH . E 5 HOH A 83 783 103 HOH HOH . E 5 HOH A 84 784 104 HOH HOH . E 5 HOH A 85 785 105 HOH HOH . E 5 HOH A 86 786 106 HOH HOH . E 5 HOH A 87 787 107 HOH HOH . E 5 HOH A 88 788 108 HOH HOH . E 5 HOH A 89 789 109 HOH HOH . E 5 HOH A 90 790 110 HOH HOH . E 5 HOH A 91 791 111 HOH HOH . E 5 HOH A 92 792 113 HOH HOH . E 5 HOH A 93 793 114 HOH HOH . E 5 HOH A 94 794 116 HOH HOH . E 5 HOH A 95 795 117 HOH HOH . E 5 HOH A 96 796 118 HOH WAT . E 5 HOH A 97 797 119 HOH HOH . E 5 HOH A 98 798 122 HOH HOH . E 5 HOH A 99 799 123 HOH HOH . E 5 HOH A 100 800 124 HOH HOH . E 5 HOH A 101 801 125 HOH HOH . E 5 HOH A 102 802 126 HOH HOH . E 5 HOH A 103 803 127 HOH HOH . E 5 HOH A 104 804 128 HOH HOH . E 5 HOH A 105 805 129 HOH HOH . E 5 HOH A 106 806 130 HOH HOH . E 5 HOH A 107 807 132 HOH HOH . E 5 HOH A 108 808 133 HOH HOH . E 5 HOH A 109 809 134 HOH HOH . E 5 HOH A 110 810 135 HOH HOH . E 5 HOH A 111 811 136 HOH HOH . E 5 HOH A 112 812 138 HOH HOH . E 5 HOH A 113 813 139 HOH HOH . E 5 HOH A 114 814 141 HOH HOH . E 5 HOH A 115 815 142 HOH HOH . E 5 HOH A 116 816 143 HOH HOH . E 5 HOH A 117 817 144 HOH HOH . E 5 HOH A 118 818 145 HOH HOH . E 5 HOH A 119 819 146 HOH HOH . E 5 HOH A 120 820 148 HOH HOH . E 5 HOH A 121 821 149 HOH HOH . E 5 HOH A 122 822 150 HOH HOH . E 5 HOH A 123 823 151 HOH HOH . E 5 HOH A 124 824 152 HOH HOH . E 5 HOH A 125 825 153 HOH HOH . E 5 HOH A 126 826 154 HOH HOH . E 5 HOH A 127 827 155 HOH HOH . E 5 HOH A 128 828 156 HOH HOH . E 5 HOH A 129 829 157 HOH HOH . E 5 HOH A 130 830 159 HOH HOH . E 5 HOH A 131 831 160 HOH HOH . E 5 HOH A 132 832 161 HOH HOH . E 5 HOH A 133 833 162 HOH HOH . E 5 HOH A 134 834 163 HOH HOH . E 5 HOH A 135 835 164 HOH HOH . E 5 HOH A 136 836 165 HOH HOH . E 5 HOH A 137 837 168 HOH HOH . E 5 HOH A 138 838 171 HOH HOH . E 5 HOH A 139 839 172 HOH HOH . E 5 HOH A 140 840 173 HOH HOH . E 5 HOH A 141 841 174 HOH HOH . E 5 HOH A 142 842 175 HOH HOH . E 5 HOH A 143 843 176 HOH HOH . E 5 HOH A 144 844 177 HOH HOH . E 5 HOH A 145 845 180 HOH HOH . E 5 HOH A 146 846 181 HOH HOH . E 5 HOH A 147 847 183 HOH HOH . E 5 HOH A 148 848 184 HOH HOH . E 5 HOH A 149 849 185 HOH HOH . E 5 HOH A 150 850 187 HOH HOH . E 5 HOH A 151 851 188 HOH HOH . E 5 HOH A 152 852 189 HOH HOH . E 5 HOH A 153 853 190 HOH HOH . E 5 HOH A 154 854 191 HOH HOH . E 5 HOH A 155 855 193 HOH HOH . E 5 HOH A 156 856 194 HOH HOH . E 5 HOH A 157 857 195 HOH HOH . E 5 HOH A 158 858 196 HOH HOH . E 5 HOH A 159 859 197 HOH HOH . E 5 HOH A 160 860 198 HOH HOH . E 5 HOH A 161 861 199 HOH HOH . E 5 HOH A 162 862 200 HOH HOH . E 5 HOH A 163 863 201 HOH HOH . E 5 HOH A 164 864 202 HOH HOH . E 5 HOH A 165 865 203 HOH HOH . E 5 HOH A 166 866 204 HOH HOH . E 5 HOH A 167 867 205 HOH HOH . E 5 HOH A 168 868 206 HOH HOH . E 5 HOH A 169 869 207 HOH HOH . E 5 HOH A 170 870 209 HOH HOH . E 5 HOH A 171 871 210 HOH HOH . E 5 HOH A 172 872 211 HOH HOH . E 5 HOH A 173 873 212 HOH HOH . E 5 HOH A 174 874 214 HOH HOH . E 5 HOH A 175 875 215 HOH HOH . E 5 HOH A 176 876 216 HOH HOH . E 5 HOH A 177 877 217 HOH HOH . E 5 HOH A 178 878 218 HOH HOH . E 5 HOH A 179 879 219 HOH HOH . E 5 HOH A 180 880 221 HOH HOH . E 5 HOH A 181 881 226 HOH HOH . E 5 HOH A 182 882 227 HOH HOH . E 5 HOH A 183 883 231 HOH HOH . E 5 HOH A 184 884 232 HOH HOH . E 5 HOH A 185 885 233 HOH HOH . E 5 HOH A 186 886 234 HOH HOH . E 5 HOH A 187 887 235 HOH HOH . E 5 HOH A 188 888 236 HOH HOH . E 5 HOH A 189 889 237 HOH HOH . E 5 HOH A 190 890 239 HOH HOH . E 5 HOH A 191 891 240 HOH HOH . E 5 HOH A 192 892 241 HOH HOH . E 5 HOH A 193 893 243 HOH HOH . E 5 HOH A 194 894 244 HOH HOH . E 5 HOH A 195 895 250 HOH HOH . E 5 HOH A 196 896 254 HOH HOH . E 5 HOH A 197 897 255 HOH HOH . E 5 HOH A 198 898 257 HOH HOH . E 5 HOH A 199 899 258 HOH HOH . E 5 HOH A 200 900 260 HOH HOH . E 5 HOH A 201 901 261 HOH HOH . E 5 HOH A 202 902 262 HOH HOH . E 5 HOH A 203 903 265 HOH HOH . E 5 HOH A 204 904 267 HOH HOH . E 5 HOH A 205 905 269 HOH HOH . E 5 HOH A 206 906 271 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 ASD . . . D 4 15.574 31.186 11.851 1 41.87 ? C1 ASD 600 A 1 HETATM 2 C C10 ASD . . . D 4 16.679 32.215 12.35 1 39.16 ? C10 ASD 600 A 1 HETATM 3 C C11 ASD . . . D 4 18.359 31.51 10.347 1 35.93 ? C11 ASD 600 A 1 HETATM 4 C C12 ASD . . . D 4 19.821 30.992 10.311 1 33.49 ? C12 ASD 600 A 1 HETATM 5 C C13 ASD . . . D 4 20.801 32.221 10.574 1 31.37 ? C13 ASD 600 A 1 HETATM 6 C C14 ASD . . . D 4 20.741 32.493 11.995 1 31.63 ? C14 ASD 600 A 1 HETATM 7 C C15 ASD . . . D 4 21.748 33.597 12.285 1 30.17 ? C15 ASD 600 A 1 HETATM 8 C C16 ASD . . . D 4 22.957 32.962 11.514 1 26.12 ? C16 ASD 600 A 1 HETATM 9 C C17 ASD . . . D 4 22.293 32.047 10.391 1 31.11 ? C17 ASD 600 A 1 HETATM 10 C C18 ASD . . . D 4 20.396 33.392 9.622 1 30.92 ? C18 ASD 600 A 1 HETATM 11 C C19 ASD . . . D 4 16.245 33.571 11.736 1 43.2 ? C19 ASD 600 A 1 HETATM 12 C C2 ASD . . . D 4 14.586 30.499 12.825 1 41.29 ? C2 ASD 600 A 1 HETATM 13 C C3 ASD . . . D 4 14.76 30.802 14.302 1 43.38 ? C3 ASD 600 A 1 HETATM 14 C C4 ASD . . . D 4 15.85 31.71 14.709 1 42.23 ? C4 ASD 600 A 1 HETATM 15 C C5 ASD . . . D 4 16.692 32.372 13.914 1 39.31 ? C5 ASD 600 A 1 HETATM 16 C C6 ASD . . . D 4 17.735 33.337 14.497 1 37.31 ? C6 ASD 600 A 1 HETATM 17 C C7 ASD . . . D 4 19.129 33.125 13.975 1 36.12 ? C7 ASD 600 A 1 HETATM 18 C C8 ASD . . . D 4 19.251 32.901 12.396 1 34.51 ? C8 ASD 600 A 1 HETATM 19 C C9 ASD . . . D 4 18.179 31.766 11.94 1 37.24 ? C9 ASD 600 A 1 HETATM 20 O O1 ASD . . . D 4 14.043 30.284 15.138 1 44.97 ? O1 ASD 600 A 1 HETATM 21 O O2 ASD . . . D 4 22.871 31.305 9.606 1 29.42 ? O2 ASD 600 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 242 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 21 #