data_1XFJ
#
_model_server_result.job_id            4BkNfPsSsmuoeM_kV-6VoQ 
_model_server_result.datetime_utc      '2025-03-21 16:05:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1xfj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":271}' 
#
_entry.id    1XFJ 
#
_exptl.entry_id    1XFJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          110.6 
_cell.angle_gamma         90 
_cell.entry_id            1XFJ 
_cell.length_a            39.807 
_cell.length_b            66.828 
_cell.length_c            43.17 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1XFJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ALA 109 A ALA 109 1_555 A N MSE 110 A MSE 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale2 A C MSE 110 A MSE 110 1_555 A N ALA 111 A ALA 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale3 A C ARG 148 A ARG 148 1_555 A N MSE 149 A MSE 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale4 A C MSE 149 A MSE 149 1_555 A N VAL 150 A VAL 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
_atom_sites.entry_id                     1XFJ 
_atom_sites.fract_transf_matrix[1][1]    0.025121 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.009442 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014964 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.024747 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ACT A 1 272 272 ACT ACT . 
C 3 BME A 1 273 273 BME BME . 
D 4 GOL A 1 271 271 GOL GOL . 
E 5 HOH A 1 274 1 HOH TIP . 
E 5 HOH A 2 275 2 HOH TIP . 
E 5 HOH A 3 276 3 HOH TIP . 
E 5 HOH A 4 277 4 HOH TIP . 
E 5 HOH A 5 278 5 HOH TIP . 
E 5 HOH A 6 279 6 HOH TIP . 
E 5 HOH A 7 280 7 HOH TIP . 
E 5 HOH A 8 281 8 HOH TIP . 
E 5 HOH A 9 282 9 HOH TIP . 
E 5 HOH A 10 283 10 HOH TIP . 
E 5 HOH A 11 284 11 HOH TIP . 
E 5 HOH A 12 285 12 HOH TIP . 
E 5 HOH A 13 286 13 HOH TIP . 
E 5 HOH A 14 287 14 HOH TIP . 
E 5 HOH A 15 288 15 HOH TIP . 
E 5 HOH A 16 289 16 HOH TIP . 
E 5 HOH A 17 290 17 HOH TIP . 
E 5 HOH A 18 291 18 HOH TIP . 
E 5 HOH A 19 292 19 HOH TIP . 
E 5 HOH A 20 293 20 HOH TIP . 
E 5 HOH A 21 294 21 HOH TIP . 
E 5 HOH A 22 295 22 HOH TIP . 
E 5 HOH A 23 296 23 HOH TIP . 
E 5 HOH A 24 297 24 HOH TIP . 
E 5 HOH A 25 298 25 HOH TIP . 
E 5 HOH A 26 299 26 HOH TIP . 
E 5 HOH A 27 300 27 HOH TIP . 
E 5 HOH A 28 301 28 HOH TIP . 
E 5 HOH A 29 302 29 HOH TIP . 
E 5 HOH A 30 303 30 HOH TIP . 
E 5 HOH A 31 304 31 HOH TIP . 
E 5 HOH A 32 305 32 HOH TIP . 
E 5 HOH A 33 306 33 HOH TIP . 
E 5 HOH A 34 307 34 HOH TIP . 
E 5 HOH A 35 308 35 HOH TIP . 
E 5 HOH A 36 309 36 HOH TIP . 
E 5 HOH A 37 310 37 HOH TIP . 
E 5 HOH A 38 311 38 HOH TIP . 
E 5 HOH A 39 312 39 HOH TIP . 
E 5 HOH A 40 313 40 HOH TIP . 
E 5 HOH A 41 314 41 HOH TIP . 
E 5 HOH A 42 315 42 HOH TIP . 
E 5 HOH A 43 316 43 HOH TIP . 
E 5 HOH A 44 317 44 HOH TIP . 
E 5 HOH A 45 318 45 HOH TIP . 
E 5 HOH A 46 319 46 HOH TIP . 
E 5 HOH A 47 320 47 HOH TIP . 
E 5 HOH A 48 321 48 HOH TIP . 
E 5 HOH A 49 322 49 HOH TIP . 
E 5 HOH A 50 323 50 HOH TIP . 
E 5 HOH A 51 324 51 HOH TIP . 
E 5 HOH A 52 325 52 HOH TIP . 
E 5 HOH A 53 326 53 HOH TIP . 
E 5 HOH A 54 327 54 HOH TIP . 
E 5 HOH A 55 328 55 HOH TIP . 
E 5 HOH A 56 329 56 HOH TIP . 
E 5 HOH A 57 330 57 HOH TIP . 
E 5 HOH A 58 331 58 HOH TIP . 
E 5 HOH A 59 332 59 HOH TIP . 
E 5 HOH A 60 333 60 HOH TIP . 
E 5 HOH A 61 334 61 HOH TIP . 
E 5 HOH A 62 335 62 HOH TIP . 
E 5 HOH A 63 336 63 HOH TIP . 
E 5 HOH A 64 337 64 HOH TIP . 
E 5 HOH A 65 338 65 HOH TIP . 
E 5 HOH A 66 339 66 HOH TIP . 
E 5 HOH A 67 340 67 HOH TIP . 
E 5 HOH A 68 341 68 HOH TIP . 
E 5 HOH A 69 342 69 HOH TIP . 
E 5 HOH A 70 343 70 HOH TIP . 
E 5 HOH A 71 344 71 HOH TIP . 
E 5 HOH A 72 345 72 HOH TIP . 
E 5 HOH A 73 346 73 HOH TIP . 
E 5 HOH A 74 347 74 HOH TIP . 
E 5 HOH A 75 348 75 HOH TIP . 
E 5 HOH A 76 349 76 HOH TIP . 
E 5 HOH A 77 350 77 HOH TIP . 
E 5 HOH A 78 351 78 HOH TIP . 
E 5 HOH A 79 352 79 HOH TIP . 
E 5 HOH A 80 353 80 HOH TIP . 
E 5 HOH A 81 354 81 HOH TIP . 
E 5 HOH A 82 355 82 HOH TIP . 
E 5 HOH A 83 356 83 HOH TIP . 
E 5 HOH A 84 357 84 HOH TIP . 
E 5 HOH A 85 358 85 HOH TIP . 
E 5 HOH A 86 359 86 HOH TIP . 
E 5 HOH A 87 360 87 HOH TIP . 
E 5 HOH A 88 361 88 HOH TIP . 
E 5 HOH A 89 362 89 HOH TIP . 
E 5 HOH A 90 363 90 HOH TIP . 
E 5 HOH A 91 364 91 HOH TIP . 
E 5 HOH A 92 365 92 HOH TIP . 
E 5 HOH A 93 366 93 HOH TIP . 
E 5 HOH A 94 367 94 HOH TIP . 
E 5 HOH A 95 368 95 HOH TIP . 
E 5 HOH A 96 369 96 HOH TIP . 
E 5 HOH A 97 370 97 HOH TIP . 
E 5 HOH A 98 371 98 HOH TIP . 
E 5 HOH A 99 372 99 HOH TIP . 
E 5 HOH A 100 373 100 HOH TIP . 
E 5 HOH A 101 374 101 HOH TIP . 
E 5 HOH A 102 375 102 HOH TIP . 
E 5 HOH A 103 376 103 HOH TIP . 
E 5 HOH A 104 377 104 HOH TIP . 
E 5 HOH A 105 378 105 HOH TIP . 
E 5 HOH A 106 379 106 HOH TIP . 
E 5 HOH A 107 380 107 HOH TIP . 
E 5 HOH A 108 381 108 HOH TIP . 
E 5 HOH A 109 382 109 HOH TIP . 
E 5 HOH A 110 383 110 HOH TIP . 
E 5 HOH A 111 384 111 HOH TIP . 
E 5 HOH A 112 385 112 HOH TIP . 
E 5 HOH A 113 386 113 HOH TIP . 
E 5 HOH A 114 387 114 HOH TIP . 
E 5 HOH A 115 388 115 HOH TIP . 
E 5 HOH A 116 389 116 HOH TIP . 
E 5 HOH A 117 390 117 HOH TIP . 
E 5 HOH A 118 391 118 HOH TIP . 
E 5 HOH A 119 392 119 HOH TIP . 
E 5 HOH A 120 393 120 HOH TIP . 
E 5 HOH A 121 394 121 HOH TIP . 
E 5 HOH A 122 395 122 HOH TIP . 
E 5 HOH A 123 396 123 HOH TIP . 
E 5 HOH A 124 397 124 HOH TIP . 
E 5 HOH A 125 398 125 HOH TIP . 
E 5 HOH A 126 399 126 HOH TIP . 
E 5 HOH A 127 400 127 HOH TIP . 
E 5 HOH A 128 401 128 HOH TIP . 
E 5 HOH A 129 402 129 HOH TIP . 
E 5 HOH A 130 403 130 HOH TIP . 
E 5 HOH A 131 404 131 HOH TIP . 
E 5 HOH A 132 405 132 HOH TIP . 
E 5 HOH A 133 406 133 HOH TIP . 
E 5 HOH A 134 407 134 HOH TIP . 
E 5 HOH A 135 408 135 HOH TIP . 
E 5 HOH A 136 409 136 HOH TIP . 
E 5 HOH A 137 410 137 HOH TIP . 
E 5 HOH A 138 411 138 HOH TIP . 
E 5 HOH A 139 412 139 HOH TIP . 
E 5 HOH A 140 413 140 HOH TIP . 
E 5 HOH A 141 414 141 HOH TIP . 
E 5 HOH A 142 415 142 HOH TIP . 
E 5 HOH A 143 416 143 HOH TIP . 
E 5 HOH A 144 417 144 HOH TIP . 
E 5 HOH A 145 418 145 HOH TIP . 
E 5 HOH A 146 419 146 HOH TIP . 
E 5 HOH A 147 420 147 HOH TIP . 
E 5 HOH A 148 421 148 HOH TIP . 
E 5 HOH A 149 422 149 HOH TIP . 
E 5 HOH A 150 423 150 HOH TIP . 
E 5 HOH A 151 424 151 HOH TIP . 
E 5 HOH A 152 425 152 HOH TIP . 
E 5 HOH A 153 426 153 HOH TIP . 
E 5 HOH A 154 427 154 HOH TIP . 
E 5 HOH A 155 428 155 HOH TIP . 
E 5 HOH A 156 429 156 HOH TIP . 
E 5 HOH A 157 430 157 HOH TIP . 
E 5 HOH A 158 431 158 HOH TIP . 
E 5 HOH A 159 432 159 HOH TIP . 
E 5 HOH A 160 433 160 HOH TIP . 
E 5 HOH A 161 434 161 HOH TIP . 
E 5 HOH A 162 435 162 HOH TIP . 
E 5 HOH A 163 436 163 HOH TIP . 
E 5 HOH A 164 437 164 HOH TIP . 
E 5 HOH A 165 438 165 HOH TIP . 
E 5 HOH A 166 439 166 HOH TIP . 
E 5 HOH A 167 440 167 HOH TIP . 
E 5 HOH A 168 441 168 HOH TIP . 
E 5 HOH A 169 442 169 HOH TIP . 
E 5 HOH A 170 443 171 HOH TIP . 
E 5 HOH A 171 444 172 HOH TIP . 
E 5 HOH A 172 445 173 HOH TIP . 
E 5 HOH A 173 446 174 HOH TIP . 
E 5 HOH A 174 447 175 HOH TIP . 
E 5 HOH A 175 448 176 HOH TIP . 
E 5 HOH A 176 449 177 HOH TIP . 
E 5 HOH A 177 450 178 HOH TIP . 
E 5 HOH A 178 451 179 HOH TIP . 
E 5 HOH A 179 452 180 HOH TIP . 
E 5 HOH A 180 453 181 HOH TIP . 
E 5 HOH A 181 454 182 HOH TIP . 
E 5 HOH A 182 455 183 HOH TIP . 
E 5 HOH A 183 456 184 HOH TIP . 
E 5 HOH A 184 457 185 HOH TIP . 
E 5 HOH A 185 458 186 HOH TIP . 
E 5 HOH A 186 459 187 HOH TIP . 
E 5 HOH A 187 460 188 HOH TIP . 
E 5 HOH A 188 461 189 HOH TIP . 
E 5 HOH A 189 462 190 HOH TIP . 
E 5 HOH A 190 463 191 HOH TIP . 
E 5 HOH A 191 464 192 HOH TIP . 
E 5 HOH A 192 465 193 HOH TIP . 
E 5 HOH A 193 466 194 HOH TIP . 
E 5 HOH A 194 467 195 HOH TIP . 
E 5 HOH A 195 468 196 HOH TIP . 
E 5 HOH A 196 469 197 HOH TIP . 
E 5 HOH A 197 470 198 HOH TIP . 
E 5 HOH A 198 471 199 HOH TIP . 
E 5 HOH A 199 472 200 HOH TIP . 
E 5 HOH A 200 473 201 HOH TIP . 
E 5 HOH A 201 474 202 HOH TIP . 
E 5 HOH A 202 475 203 HOH TIP . 
E 5 HOH A 203 476 204 HOH TIP . 
E 5 HOH A 204 477 205 HOH TIP . 
E 5 HOH A 205 478 206 HOH TIP . 
E 5 HOH A 206 479 207 HOH TIP . 
E 5 HOH A 207 480 208 HOH TIP . 
E 5 HOH A 208 481 209 HOH TIP . 
E 5 HOH A 209 482 210 HOH TIP . 
E 5 HOH A 210 483 211 HOH TIP . 
E 5 HOH A 211 484 212 HOH TIP . 
E 5 HOH A 212 485 213 HOH TIP . 
E 5 HOH A 213 486 214 HOH TIP . 
E 5 HOH A 214 487 215 HOH TIP . 
E 5 HOH A 215 488 216 HOH TIP . 
E 5 HOH A 216 489 217 HOH TIP . 
E 5 HOH A 217 490 218 HOH TIP . 
E 5 HOH A 218 491 219 HOH TIP . 
E 5 HOH A 219 492 220 HOH TIP . 
E 5 HOH A 220 493 221 HOH TIP . 
E 5 HOH A 221 494 222 HOH TIP . 
E 5 HOH A 222 495 223 HOH TIP . 
E 5 HOH A 223 496 224 HOH TIP . 
E 5 HOH A 224 497 225 HOH TIP . 
E 5 HOH A 225 498 226 HOH TIP . 
E 5 HOH A 226 499 227 HOH TIP . 
E 5 HOH A 227 500 228 HOH TIP . 
E 5 HOH A 228 501 229 HOH TIP . 
E 5 HOH A 229 502 230 HOH TIP . 
E 5 HOH A 230 503 231 HOH TIP . 
E 5 HOH A 231 504 232 HOH TIP . 
E 5 HOH A 232 505 233 HOH TIP . 
E 5 HOH A 233 506 234 HOH TIP . 
E 5 HOH A 234 507 235 HOH TIP . 
E 5 HOH A 235 508 236 HOH TIP . 
E 5 HOH A 236 509 237 HOH TIP . 
E 5 HOH A 237 510 238 HOH TIP . 
E 5 HOH A 238 511 239 HOH TIP . 
E 5 HOH A 239 512 240 HOH TIP . 
E 5 HOH A 240 513 241 HOH TIP . 
E 5 HOH A 241 514 242 HOH TIP . 
E 5 HOH A 242 515 243 HOH TIP . 
E 5 HOH A 243 516 244 HOH TIP . 
E 5 HOH A 244 517 245 HOH TIP . 
E 5 HOH A 245 518 246 HOH TIP . 
E 5 HOH A 246 519 247 HOH TIP . 
E 5 HOH A 247 520 248 HOH TIP . 
E 5 HOH A 248 521 249 HOH TIP . 
E 5 HOH A 249 522 250 HOH TIP . 
E 5 HOH A 250 523 251 HOH TIP . 
E 5 HOH A 251 524 252 HOH TIP . 
E 5 HOH A 252 525 253 HOH TIP . 
E 5 HOH A 253 526 254 HOH TIP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 4 25.88 23.819 1.171 1 18.37 ? C1 GOL 271 A 1 
HETATM 2 O O1 GOL . . . D 4 24.66 23.552 1.179 1 11.22 ? O1 GOL 271 A 1 
HETATM 3 C C2 GOL . . . D 4 26.74 23.679 2.255 1 20.2 ? C2 GOL 271 A 1 
HETATM 4 O O2 GOL . . . D 4 27.518 22.583 2.129 1 19.14 ? O2 GOL 271 A 1 
HETATM 5 C C3 GOL . . . D 4 26.528 24.574 3.039 1 18.05 ? C3 GOL 271 A 1 
HETATM 6 O O3 GOL . . . D 4 25.873 25.851 3.646 1 14.18 ? O3 GOL 271 A 1 
#
_model_server_stats.io_time_ms              5 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    24 
_model_server_stats.query_time_ms           236 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#