data_1XH4
#
_model_server_result.job_id            7SXPl2SOBUJM7Q6ymo2DFA 
_model_server_result.datetime_utc      '2024-12-08 23:42:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1xh4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":351}' 
#
_entry.id    1XH4 
#
_exptl.entry_id    1XH4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              501.577 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-[4-({4-[5-(DIMETHYLAMINO)-2-HYDROXYBENZOYL]BENZOYL}AMINO)AZEPAN-3-YL]ISONICOTINAMIDE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1XH4 
_cell.length_a            73.013 
_cell.length_b            79.144 
_cell.length_c            79.643 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1XH4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C PHE 138 A PHE 138 1_555 A N SEP 139 A SEP 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale2 A C SEP 139 A SEP 139 1_555 A N GLU 140 A GLU 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale3 A C TRP 196 A TRP 196 1_555 A N TPO 197 A TPO 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale4 A C TPO 197 A TPO 197 1_555 A N LEU 198 A LEU 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale5 A C VAL 337 A VAL 337 1_555 A N SEP 338 A SEP 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
covale ? covale6 A C SEP 338 A SEP 338 1_555 A N ILE 339 A ILE 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
#
_chem_comp.formula           'C28 H31 N5 O4' 
_chem_comp.formula_weight    501.577 
_chem_comp.id                R69 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-[4-({4-[5-(DIMETHYLAMINO)-2-HYDROXYBENZOYL]BENZOYL}AMINO)AZEPAN-3-YL]ISONICOTINAMIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O22 C21 R69 doub 277 n n 
C21 C14 R69 sing 278 n n 
C21 N23 R69 sing 279 n n 
C14 C13 R69 doub 280 n y 
C14 C15 R69 sing 281 n y 
C13 C12 R69 sing 282 n y 
C13 H13 R69 sing 283 n n 
C12 N11 R69 doub 284 n y 
C12 H12 R69 sing 285 n n 
N11 C16 R69 sing 286 n y 
C16 C15 R69 doub 287 n y 
C16 H16 R69 sing 288 n n 
C15 H15 R69 sing 289 n n 
N23 C31 R69 sing 290 n n 
N23 H23 R69 sing 291 n n 
C31 C32 R69 sing 292 n n 
C31 C37 R69 sing 293 n n 
C31 H31 R69 sing 294 n n 
C32 N33 R69 sing 295 n n 
C32 H321 R69 sing 296 n n 
C32 H322 R69 sing 297 n n 
N33 C34 R69 sing 298 n n 
N33 H33 R69 sing 299 n n 
C34 C35 R69 sing 300 n n 
C34 H341 R69 sing 301 n n 
C34 H342 R69 sing 302 n n 
C35 C36 R69 sing 303 n n 
C35 H351 R69 sing 304 n n 
C35 H352 R69 sing 305 n n 
C36 C37 R69 sing 306 n n 
C36 H361 R69 sing 307 n n 
C36 H362 R69 sing 308 n n 
C37 N41 R69 sing 309 n n 
C37 H37 R69 sing 310 n n 
N41 C42 R69 sing 311 n n 
N41 H41 R69 sing 312 n n 
C42 O43 R69 doub 313 n n 
C42 C51 R69 sing 314 n n 
C51 C52 R69 doub 315 n y 
C51 C56 R69 sing 316 n y 
C52 C53 R69 sing 317 n y 
C52 H52 R69 sing 318 n n 
C53 C54 R69 doub 319 n y 
C53 H53 R69 sing 320 n n 
C56 C55 R69 doub 321 n y 
C56 H56 R69 sing 322 n n 
C55 C54 R69 sing 323 n y 
C55 H55 R69 sing 324 n n 
C54 C61 R69 sing 325 n n 
C61 O62 R69 doub 326 n n 
C61 C71 R69 sing 327 n n 
C71 C72 R69 doub 328 n y 
C71 C76 R69 sing 329 n y 
C72 O92 R69 sing 330 n n 
C72 C73 R69 sing 331 n y 
O92 H92 R69 sing 332 n n 
C73 C74 R69 doub 333 n y 
C73 H73 R69 sing 334 n n 
C74 C75 R69 sing 335 n y 
C74 H74 R69 sing 336 n n 
C76 C75 R69 doub 337 n y 
C76 H76 R69 sing 338 n n 
C75 N95 R69 sing 339 n n 
N95 C98 R69 sing 340 n n 
N95 C99 R69 sing 341 n n 
C98 H981 R69 sing 342 n n 
C98 H982 R69 sing 343 n n 
C98 H983 R69 sing 344 n n 
C99 H991 R69 sing 345 n n 
C99 H992 R69 sing 346 n n 
C99 H993 R69 sing 347 n n 
#
_atom_sites.entry_id                     1XH4 
_atom_sites.fract_transf_matrix[1][1]    0.013696 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012635 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012556 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 R69 A 1 351 351 R69 R69 . 
D 4 HOH A 1 352 3 HOH HOH . 
D 4 HOH A 2 353 2 HOH HOH . 
D 4 HOH A 3 354 4 HOH HOH . 
D 4 HOH A 4 355 8 HOH HOH . 
D 4 HOH A 5 356 9 HOH HOH . 
D 4 HOH A 6 357 11 HOH HOH . 
D 4 HOH A 7 358 12 HOH HOH . 
D 4 HOH A 8 359 15 HOH HOH . 
D 4 HOH A 9 360 16 HOH HOH . 
D 4 HOH A 10 361 20 HOH HOH . 
D 4 HOH A 11 362 22 HOH HOH . 
D 4 HOH A 12 363 23 HOH HOH . 
D 4 HOH A 13 364 25 HOH HOH . 
D 4 HOH A 14 365 30 HOH HOH . 
D 4 HOH A 15 366 32 HOH HOH . 
D 4 HOH A 16 367 34 HOH HOH . 
D 4 HOH A 17 368 36 HOH HOH . 
D 4 HOH A 18 369 37 HOH HOH . 
D 4 HOH A 19 370 39 HOH HOH . 
D 4 HOH A 20 371 40 HOH HOH . 
D 4 HOH A 21 372 48 HOH HOH . 
D 4 HOH A 22 373 50 HOH HOH . 
D 4 HOH A 23 374 52 HOH HOH . 
D 4 HOH A 24 375 54 HOH HOH . 
D 4 HOH A 25 376 55 HOH HOH . 
D 4 HOH A 26 377 57 HOH HOH . 
D 4 HOH A 27 378 59 HOH HOH . 
D 4 HOH A 28 379 105 HOH HOH . 
D 4 HOH A 29 380 106 HOH HOH . 
D 4 HOH A 30 381 108 HOH HOH . 
D 4 HOH A 31 382 109 HOH HOH . 
D 4 HOH A 32 383 111 HOH HOH . 
D 4 HOH A 33 384 112 HOH HOH . 
D 4 HOH A 34 385 113 HOH HOH . 
D 4 HOH A 35 386 118 HOH HOH . 
D 4 HOH A 36 387 127 HOH HOH . 
D 4 HOH A 37 388 132 HOH HOH . 
D 4 HOH A 38 389 134 HOH HOH . 
D 4 HOH A 39 390 137 HOH HOH . 
D 4 HOH A 40 391 141 HOH HOH . 
D 4 HOH A 41 392 225 HOH HOH . 
D 4 HOH A 42 393 232 HOH HOH . 
D 4 HOH A 43 394 239 HOH HOH . 
D 4 HOH A 44 395 241 HOH HOH . 
D 4 HOH A 45 396 242 HOH HOH . 
D 4 HOH A 46 397 250 HOH HOH . 
D 4 HOH A 47 398 259 HOH HOH . 
D 4 HOH A 48 399 264 HOH HOH . 
D 4 HOH A 49 400 265 HOH HOH . 
D 4 HOH A 50 401 294 HOH HOH . 
D 4 HOH A 51 402 216 HOH HOH . 
D 4 HOH A 52 403 233 HOH HOH . 
D 4 HOH A 53 404 234 HOH HOH . 
D 4 HOH A 54 405 302 HOH HOH . 
D 4 HOH A 55 406 237 HOH HOH . 
D 4 HOH A 56 407 238 HOH HOH . 
D 4 HOH A 57 408 442 HOH HOH . 
D 4 HOH A 58 409 448 HOH HOH . 
D 4 HOH A 59 410 449 HOH HOH . 
D 4 HOH A 60 411 450 HOH HOH . 
D 4 HOH A 61 412 503 HOH HOH . 
D 4 HOH A 62 413 504 HOH HOH . 
D 4 HOH A 63 414 517 HOH HOH . 
D 4 HOH A 64 415 540 HOH HOH . 
D 4 HOH A 65 416 545 HOH HOH . 
D 4 HOH A 66 417 548 HOH HOH . 
D 4 HOH A 67 418 550 HOH HOH . 
D 4 HOH A 68 419 551 HOH HOH . 
D 4 HOH A 69 420 556 HOH HOH . 
D 4 HOH A 70 421 559 HOH HOH . 
D 4 HOH A 71 422 563 HOH HOH . 
D 4 HOH A 72 423 566 HOH HOH . 
D 4 HOH A 73 424 572 HOH HOH . 
D 4 HOH A 74 425 585 HOH HOH . 
D 4 HOH A 75 426 589 HOH HOH . 
D 4 HOH A 76 427 594 HOH HOH . 
D 4 HOH A 77 428 598 HOH HOH . 
D 4 HOH A 78 429 599 HOH HOH . 
D 4 HOH A 79 430 579 HOH HOH . 
D 4 HOH A 80 431 584 HOH HOH . 
D 4 HOH A 81 432 565 HOH HOH . 
D 4 HOH A 82 433 576 HOH HOH . 
D 4 HOH A 83 434 617 HOH HOH . 
D 4 HOH A 84 435 765 HOH HOH . 
D 4 HOH A 85 436 6 HOH HOH . 
D 4 HOH A 86 437 13 HOH HOH . 
D 4 HOH A 87 438 18 HOH HOH . 
D 4 HOH A 88 439 38 HOH HOH . 
D 4 HOH A 89 440 45 HOH HOH . 
D 4 HOH A 90 441 53 HOH HOH . 
D 4 HOH A 91 442 123 HOH HOH . 
D 4 HOH A 92 443 266 HOH HOH . 
D 4 HOH A 93 444 501 HOH HOH . 
D 4 HOH A 94 445 512 HOH HOH . 
D 4 HOH A 95 446 516 HOH HOH . 
D 4 HOH A 96 447 756 HOH HOH . 
D 4 HOH A 97 448 632 HOH HOH . 
D 4 HOH A 98 449 643 HOH HOH . 
D 4 HOH A 99 450 645 HOH HOH . 
D 4 HOH A 100 451 758 HOH HOH . 
D 4 HOH A 101 452 761 HOH HOH . 
E 4 HOH B 1 25 1 HOH HOH . 
E 4 HOH B 2 26 5 HOH HOH . 
E 4 HOH B 3 27 14 HOH HOH . 
E 4 HOH B 4 28 19 HOH HOH . 
E 4 HOH B 5 29 21 HOH HOH . 
E 4 HOH B 6 30 51 HOH HOH . 
E 4 HOH B 7 31 101 HOH HOH . 
E 4 HOH B 8 32 120 HOH HOH . 
E 4 HOH B 9 33 149 HOH HOH . 
E 4 HOH B 10 34 526 HOH HOH . 
E 4 HOH B 11 35 578 HOH HOH . 
E 4 HOH B 12 36 300 HOH HOH . 
E 4 HOH B 13 37 439 HOH HOH . 
E 4 HOH B 14 38 759 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O22 R69 . . . C 3 10.477 21.116 30.256 1 21.38 ? O22 R69 351 A 1 
HETATM 2 C C21 R69 . . . C 3 10.597 22.348 30.163 1 21.87 ? C21 R69 351 A 1 
HETATM 3 C C14 R69 . . . C 3 11.886 23.036 30.377 1 23.94 ? C14 R69 351 A 1 
HETATM 4 C C13 R69 . . . C 3 13.052 22.283 30.622 1 23.03 ? C13 R69 351 A 1 
HETATM 5 C C12 R69 . . . C 3 14.286 22.93 30.763 1 24.07 ? C12 R69 351 A 1 
HETATM 6 N N11 R69 . . . C 3 14.402 24.259 30.711 1 23.44 ? N11 R69 351 A 1 
HETATM 7 C C16 R69 . . . C 3 13.312 25.004 30.478 1 26.23 ? C16 R69 351 A 1 
HETATM 8 C C15 R69 . . . C 3 12.036 24.438 30.286 1 25.09 ? C15 R69 351 A 1 
HETATM 9 N N23 R69 . . . C 3 9.484 23.106 29.809 1 20.49 ? N23 R69 351 A 1 
HETATM 10 C C31 R69 . . . C 3 8.237 22.512 29.34 1 20.43 ? C31 R69 351 A 1 
HETATM 11 C C32 R69 . . . C 3 8.034 22.99 27.898 1 21.09 ? C32 R69 351 A 1 
HETATM 12 N N33 R69 . . . C 3 6.705 22.448 27.434 1 21.48 ? N33 R69 351 A 1 
HETATM 13 C C34 R69 . . . C 3 5.507 23.344 27.605 1 20.11 ? C34 R69 351 A 1 
HETATM 14 C C35 R69 . . . C 3 4.973 23.296 29.025 1 20.59 ? C35 R69 351 A 1 
HETATM 15 C C36 R69 . . . C 3 6.028 23.839 30.002 1 20.41 ? C36 R69 351 A 1 
HETATM 16 C C37 R69 . . . C 3 7.138 22.847 30.406 1 20.69 ? C37 R69 351 A 1 
HETATM 17 N N41 R69 . . . C 3 6.556 21.595 30.973 1 20.22 ? N41 R69 351 A 1 
HETATM 18 C C42 R69 . . . C 3 5.901 21.573 32.213 1 22.02 ? C42 R69 351 A 1 
HETATM 19 O O43 R69 . . . C 3 5.926 22.529 33.012 1 18.37 ? O43 R69 351 A 1 
HETATM 20 C C51 R69 . . . C 3 5.099 20.404 32.54 1 24.15 ? C51 R69 351 A 1 
HETATM 21 C C52 R69 . . . C 3 4.744 20.148 33.881 1 24.7 ? C52 R69 351 A 1 
HETATM 22 C C53 R69 . . . C 3 3.927 19.068 34.21 1 23.53 ? C53 R69 351 A 1 
HETATM 23 C C56 R69 . . . C 3 4.654 19.551 31.51 1 25.51 ? C56 R69 351 A 1 
HETATM 24 C C55 R69 . . . C 3 3.884 18.453 31.825 1 25.07 ? C55 R69 351 A 1 
HETATM 25 C C54 R69 . . . C 3 3.517 18.205 33.169 1 25.79 ? C54 R69 351 A 1 
HETATM 26 C C61 R69 . . . C 3 2.633 17.078 33.447 1 23.55 ? C61 R69 351 A 1 
HETATM 27 O O62 R69 . . . C 3 1.83 17.234 34.392 1 23.63 ? O62 R69 351 A 1 
HETATM 28 C C71 R69 . . . C 3 2.529 15.918 32.62 1 23.02 ? C71 R69 351 A 1 
HETATM 29 C C72 R69 . . . C 3 3.605 15.023 32.309 1 24.21 ? C72 R69 351 A 1 
HETATM 30 O O92 R69 . . . C 3 4.799 15.178 32.758 1 23.97 ? O92 R69 351 A 1 
HETATM 31 C C73 R69 . . . C 3 3.275 13.926 31.434 1 24.17 ? C73 R69 351 A 1 
HETATM 32 C C74 R69 . . . C 3 1.999 13.742 30.936 1 21.33 ? C74 R69 351 A 1 
HETATM 33 C C76 R69 . . . C 3 1.247 15.698 32.101 1 22.38 ? C76 R69 351 A 1 
HETATM 34 C C75 R69 . . . C 3 0.952 14.627 31.273 1 22 ? C75 R69 351 A 1 
HETATM 35 N N95 R69 . . . C 3 -0.371 14.447 30.72 1 22.97 ? N95 R69 351 A 1 
HETATM 36 C C98 R69 . . . C 3 -1.514 15.272 31.155 1 21.15 ? C98 R69 351 A 1 
HETATM 37 C C99 R69 . . . C 3 -0.747 13.114 30.197 1 23.12 ? C99 R69 351 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           264 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           37 
#