data_1XHA # _model_server_result.job_id Cr6aRGFHNYRn_fpkudcNZg _model_server_result.datetime_utc '2024-12-03 12:19:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1xha # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1001}' # _entry.id 1XHA # _exptl.entry_id 1XHA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 587.684 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-{4-[(4-{3-[(2R)-3,3-DIMETHYLPIPERIDIN-2-YL]-2-FLUORO-6-HYDROXYBENZOYL}BENZOYL)AMINO]AZEPAN-3-YL}ISONICOTINAMIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1XHA _cell.length_a 49.842 _cell.length_b 79.572 _cell.length_c 117.329 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XHA _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C TRP 196 A TRP 196 1_555 A N TPO 197 A TPO 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale2 A C TPO 197 A TPO 197 1_555 A N LEU 198 A LEU 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 A C VAL 337 A VAL 337 1_555 A N SEP 338 A SEP 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 A C SEP 338 A SEP 338 1_555 A N ILE 339 A ILE 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? # _chem_comp.formula 'C33 H38 F N5 O4' _chem_comp.formula_weight 587.684 _chem_comp.id R68 _chem_comp.mon_nstd_flag . _chem_comp.name N-{4-[(4-{3-[(2R)-3,3-DIMETHYLPIPERIDIN-2-YL]-2-FLUORO-6-HYDROXYBENZOYL}BENZOYL)AMINO]AZEPAN-3-YL}ISONICOTINAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O22 C21 R68 doub 277 n n C21 C14 R68 sing 278 n n C21 N23 R68 sing 279 n n C14 C13 R68 doub 280 n y C14 C15 R68 sing 281 n y C13 C12 R68 sing 282 n y C13 H13 R68 sing 283 n n C12 N11 R68 doub 284 n y C12 H12 R68 sing 285 n n N11 C16 R68 sing 286 n y C16 C15 R68 doub 287 n y C16 H16 R68 sing 288 n n C15 H15 R68 sing 289 n n N23 C31 R68 sing 290 n n N23 H23 R68 sing 291 n n C31 C32 R68 sing 292 n n C31 C37 R68 sing 293 n n C31 H31 R68 sing 294 n n C32 N33 R68 sing 295 n n C32 H321 R68 sing 296 n n C32 H322 R68 sing 297 n n N33 C34 R68 sing 298 n n N33 H33 R68 sing 299 n n C34 C35 R68 sing 300 n n C34 H341 R68 sing 301 n n C34 H342 R68 sing 302 n n C35 C36 R68 sing 303 n n C35 H351 R68 sing 304 n n C35 H352 R68 sing 305 n n C36 C37 R68 sing 306 n n C36 H361 R68 sing 307 n n C36 H362 R68 sing 308 n n C37 N41 R68 sing 309 n n C37 H37 R68 sing 310 n n N41 C42 R68 sing 311 n n N41 H41 R68 sing 312 n n C42 O43 R68 doub 313 n n C42 C51 R68 sing 314 n n C51 C52 R68 doub 315 n y C51 C56 R68 sing 316 n y C52 C53 R68 sing 317 n y C52 H52 R68 sing 318 n n C53 C54 R68 doub 319 n y C53 H53 R68 sing 320 n n C56 C55 R68 doub 321 n y C56 H56 R68 sing 322 n n C55 C54 R68 sing 323 n y C55 H55 R68 sing 324 n n C54 C61 R68 sing 325 n n C61 O62 R68 doub 326 n n C61 C71 R68 sing 327 n n C71 C72 R68 doub 328 n y C71 C76 R68 sing 329 n y C72 O82 R68 sing 330 n n C72 C73 R68 sing 331 n y O82 H82 R68 sing 332 n n C73 C74 R68 doub 333 n y C73 H73 R68 sing 334 n n C74 C75 R68 sing 335 n y C74 H74 R68 sing 336 n n C75 C76 R68 doub 337 n y C75 C91 R68 sing 338 n n C76 F89 R68 sing 339 n n C91 C92 R68 sing 340 n n C91 N96 R68 sing 341 n n C91 H91 R68 sing 342 n n C92 C97 R68 sing 343 n n C92 C98 R68 sing 344 n n C92 C93 R68 sing 345 n n C97 H971 R68 sing 346 n n C97 H972 R68 sing 347 n n C97 H973 R68 sing 348 n n C98 H981 R68 sing 349 n n C98 H982 R68 sing 350 n n C98 H983 R68 sing 351 n n C93 C94 R68 sing 352 n n C93 H931 R68 sing 353 n n C93 H932 R68 sing 354 n n C94 C95 R68 sing 355 n n C94 H941 R68 sing 356 n n C94 H942 R68 sing 357 n n C95 N96 R68 sing 358 n n C95 H951 R68 sing 359 n n C95 H952 R68 sing 360 n n N96 H96 R68 sing 361 n n # _atom_sites.entry_id 1XHA _atom_sites.fract_transf_matrix[1][1] 0.020063 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012567 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008523 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 R68 A 1 1001 1 R68 R68 . D 4 HOH A 1 1002 2 HOH HOH . D 4 HOH A 2 1003 4 HOH HOH . D 4 HOH A 3 1004 5 HOH HOH . D 4 HOH A 4 1005 6 HOH HOH . D 4 HOH A 5 1006 9 HOH HOH . D 4 HOH A 6 1007 11 HOH HOH . D 4 HOH A 7 1008 15 HOH HOH . D 4 HOH A 8 1009 22 HOH HOH . D 4 HOH A 9 1010 25 HOH HOH . D 4 HOH A 10 1011 36 HOH HOH . D 4 HOH A 11 1012 40 HOH HOH . D 4 HOH A 12 1013 52 HOH HOH . D 4 HOH A 13 1014 53 HOH HOH . D 4 HOH A 14 1015 123 HOH HOH . D 4 HOH A 15 1016 225 HOH HOH . D 4 HOH A 16 1017 232 HOH HOH . D 4 HOH A 17 1018 242 HOH HOH . D 4 HOH A 18 1019 259 HOH HOH . D 4 HOH A 19 1020 264 HOH HOH . D 4 HOH A 20 1021 265 HOH HOH . D 4 HOH A 21 1022 294 HOH HOH . D 4 HOH A 22 1023 216 HOH HOH . D 4 HOH A 23 1024 238 HOH HOH . D 4 HOH A 24 1025 523 HOH HOH . D 4 HOH A 25 1026 536 HOH HOH . D 4 HOH A 26 1027 550 HOH HOH . D 4 HOH A 27 1028 566 HOH HOH . D 4 HOH A 28 1029 579 HOH HOH . D 4 HOH A 29 1030 584 HOH HOH . D 4 HOH A 30 1031 617 HOH HOH . D 4 HOH A 31 1032 631 HOH HOH . D 4 HOH A 32 1033 636 HOH HOH . D 4 HOH A 33 1034 643 HOH HOH . D 4 HOH A 34 1035 644 HOH HOH . D 4 HOH A 35 1036 741 HOH HOH . D 4 HOH A 36 1037 745 HOH HOH . D 4 HOH A 37 1038 746 HOH HOH . D 4 HOH A 38 1039 763 HOH HOH . D 4 HOH A 39 1040 764 HOH HOH . D 4 HOH A 40 1041 777 HOH HOH . D 4 HOH A 41 1042 778 HOH HOH . D 4 HOH A 42 1043 783 HOH HOH . D 4 HOH A 43 1044 863 HOH HOH . E 4 HOH B 1 1 1 HOH HOH . E 4 HOH B 2 149 149 HOH HOH . E 4 HOH B 3 526 526 HOH HOH . E 4 HOH B 4 595 595 HOH HOH . E 4 HOH B 5 658 658 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O22 R68 . . . C 3 6.599 38.198 42.464 1 33.74 ? O22 R68 1001 A 1 HETATM 2 C C21 R68 . . . C 3 6.67 39.411 42.657 1 31.47 ? C21 R68 1001 A 1 HETATM 3 C C14 R68 . . . C 3 7.835 40.055 43.289 1 31.53 ? C14 R68 1001 A 1 HETATM 4 C C13 R68 . . . C 3 8.995 39.324 43.512 1 28.95 ? C13 R68 1001 A 1 HETATM 5 C C12 R68 . . . C 3 10.075 39.941 44.106 1 30.84 ? C12 R68 1001 A 1 HETATM 6 N N11 R68 . . . C 3 10.061 41.214 44.491 1 30.8 ? N11 R68 1001 A 1 HETATM 7 C C16 R68 . . . C 3 8.975 41.946 44.284 1 32.43 ? C16 R68 1001 A 1 HETATM 8 C C15 R68 . . . C 3 7.851 41.401 43.683 1 32.13 ? C15 R68 1001 A 1 HETATM 9 N N23 R68 . . . C 3 5.589 40.164 42.244 1 31.11 ? N23 R68 1001 A 1 HETATM 10 C C31 R68 . . . C 3 4.627 39.618 41.287 1 31.07 ? C31 R68 1001 A 1 HETATM 11 C C32 R68 . . . C 3 4.933 40.158 39.857 1 30.21 ? C32 R68 1001 A 1 HETATM 12 N N33 R68 . . . C 3 4.068 39.531 38.837 1 28.73 ? N33 R68 1001 A 1 HETATM 13 C C34 R68 . . . C 3 2.831 40.314 38.62 1 29.5 ? C34 R68 1001 A 1 HETATM 14 C C35 R68 . . . C 3 1.809 40.248 39.759 1 29.37 ? C35 R68 1001 A 1 HETATM 15 C C36 R68 . . . C 3 2.341 40.878 41.065 1 31.08 ? C36 R68 1001 A 1 HETATM 16 C C37 R68 . . . C 3 3.239 39.917 41.869 1 31.23 ? C37 R68 1001 A 1 HETATM 17 N N41 R68 . . . C 3 2.568 38.643 42.119 1 32.78 ? N41 R68 1001 A 1 HETATM 18 C C42 R68 . . . C 3 1.446 38.572 42.945 1 33.16 ? C42 R68 1001 A 1 HETATM 19 O O43 R68 . . . C 3 1.245 39.534 43.682 1 31.41 ? O43 R68 1001 A 1 HETATM 20 C C51 R68 . . . C 3 0.59 37.372 42.931 1 34.53 ? C51 R68 1001 A 1 HETATM 21 C C52 R68 . . . C 3 -0.177 37.04 44.072 1 35.39 ? C52 R68 1001 A 1 HETATM 22 C C53 R68 . . . C 3 -0.986 35.911 44.08 1 34.83 ? C53 R68 1001 A 1 HETATM 23 C C56 R68 . . . C 3 0.518 36.531 41.807 1 35.69 ? C56 R68 1001 A 1 HETATM 24 C C55 R68 . . . C 3 -0.297 35.399 41.795 1 35.96 ? C55 R68 1001 A 1 HETATM 25 C C54 R68 . . . C 3 -1.05 35.077 42.946 1 36.75 ? C54 R68 1001 A 1 HETATM 26 C C61 R68 . . . C 3 -1.91 33.892 42.957 1 35.73 ? C61 R68 1001 A 1 HETATM 27 O O62 R68 . . . C 3 -2.777 33.853 43.816 1 35.64 ? O62 R68 1001 A 1 HETATM 28 C C71 R68 . . . C 3 -1.838 32.791 41.999 1 35.94 ? C71 R68 1001 A 1 HETATM 29 C C72 R68 . . . C 3 -0.95 31.693 42.077 1 36.48 ? C72 R68 1001 A 1 HETATM 30 O O82 R68 . . . C 3 -0.043 31.61 43.092 1 36.53 ? O82 R68 1001 A 1 HETATM 31 C C73 R68 . . . C 3 -0.966 30.671 41.116 1 35.21 ? C73 R68 1001 A 1 HETATM 32 C C74 R68 . . . C 3 -1.874 30.72 40.045 1 35.93 ? C74 R68 1001 A 1 HETATM 33 C C75 R68 . . . C 3 -2.774 31.79 39.936 1 37.26 ? C75 R68 1001 A 1 HETATM 34 C C76 R68 . . . C 3 -2.721 32.789 40.919 1 35.9 ? C76 R68 1001 A 1 HETATM 35 F F89 R68 . . . C 3 -3.566 33.809 40.857 1 36.33 ? F89 R68 1001 A 1 HETATM 36 C C91 R68 . . . C 3 -3.778 31.803 38.806 1 39.43 ? C91 R68 1001 A 1 HETATM 37 C C92 R68 . . . C 3 -3.299 32.429 37.457 1 39.24 ? C92 R68 1001 A 1 HETATM 38 C C97 R68 . . . C 3 -2.13 31.633 36.856 1 39.24 ? C97 R68 1001 A 1 HETATM 39 C C98 R68 . . . C 3 -2.854 33.886 37.632 1 38.09 ? C98 R68 1001 A 1 HETATM 40 C C93 R68 . . . C 3 -4.497 32.348 36.462 1 41.35 ? C93 R68 1001 A 1 HETATM 41 C C94 R68 . . . C 3 -5.812 33.01 36.976 1 41.55 ? C94 R68 1001 A 1 HETATM 42 C C95 R68 . . . C 3 -6.218 32.288 38.272 1 41.7 ? C95 R68 1001 A 1 HETATM 43 N N96 R68 . . . C 3 -5.107 32.326 39.281 1 41.09 ? N96 R68 1001 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 43 #